Wall clock time and date at job start Thu Mar 4 2021 13:20:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34776 * 1 3 3 O 1.21289 * 119.99442 * 2 1 4 4 C 1.50700 * 120.00368 * 179.97438 * 2 1 3 5 5 H 1.08997 * 112.84793 * 48.80408 * 4 2 1 6 6 C 1.53777 * 113.61267 * 180.02562 * 4 2 1 7 7 C 1.53781 * 87.08536 * 89.11278 * 6 4 2 8 8 H 1.08996 * 113.61406 * 270.79831 * 7 6 4 9 9 N 1.46499 * 113.61572 * 139.97558 * 7 6 4 10 10 C 1.34770 * 120.00191 * 156.52798 * 9 7 6 11 11 O 1.21282 * 119.99943 * 0.02562 * 10 9 7 12 12 C 1.50699 * 120.00519 * 179.97438 * 10 9 7 13 13 O 1.42897 * 109.47708 * 180.02562 * 12 10 9 14 14 C 1.35895 * 117.00208 * 180.02562 * 13 12 10 15 15 C 1.38735 * 120.05238 * 180.02562 * 14 13 12 16 16 C 1.38147 * 119.94145 * 180.02562 * 15 14 13 17 17 C 1.38267 * 120.05771 * 0.02731 * 16 15 14 18 18 C 1.50699 * 119.94534 * 179.97438 * 17 16 15 19 19 O 1.42895 * 109.47158 * 299.99634 * 18 17 16 20 20 Si 1.86300 * 109.46944 * 180.02562 * 18 17 16 21 21 C 1.38271 * 120.10847 * 0.24836 * 17 16 15 22 22 C 1.38146 * 120.05540 * 359.45178 * 21 17 16 23 23 C 1.53785 * 87.16897 * 25.39080 * 7 6 4 24 24 H 0.97006 * 119.99396 * 179.97438 * 1 2 3 25 25 H 0.96995 * 120.00620 * 0.02562 * 1 2 3 26 26 H 1.09003 * 113.61857 * 334.56159 * 6 4 2 27 27 H 1.09000 * 113.69047 * 203.67634 * 6 4 2 28 28 H 0.97004 * 119.99918 * 336.53727 * 9 7 6 29 29 H 1.09001 * 109.46586 * 60.00433 * 12 10 9 30 30 H 1.08995 * 109.47495 * 300.00807 * 12 10 9 31 31 H 1.07994 * 120.03351 * 0.04968 * 15 14 13 32 32 H 1.07997 * 119.97419 * 179.97438 * 16 15 14 33 33 H 1.09000 * 109.47247 * 60.00087 * 18 17 16 34 34 H 0.96698 * 114.00355 * 300.00487 * 19 18 17 35 35 H 1.48506 * 110.00048 * 180.02562 * 20 18 17 36 36 H 1.48502 * 109.99996 * 301.31619 * 20 18 17 37 37 H 1.08003 * 119.96765 * 179.70258 * 21 17 16 38 38 H 1.08003 * 120.02771 * 180.29373 * 22 21 17 39 39 H 1.08998 * 113.61665 * 89.15987 * 23 7 6 40 40 H 1.09001 * 113.61286 * 220.06305 * 23 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3478 0.0000 0.0000 3 8 1.9541 1.0505 0.0000 4 6 2.1013 -1.3051 0.0006 5 1 1.7401 -2.0027 -0.7549 6 6 3.6296 -1.1339 0.0011 7 6 3.5486 -1.1186 1.5367 8 1 3.4007 -0.1236 1.9563 9 7 4.6339 -1.8555 2.1890 10 6 4.9819 -1.5602 3.4571 11 8 4.3963 -0.6847 4.0584 12 6 6.0979 -2.3185 4.1283 13 8 6.2760 -1.8264 5.4580 14 6 7.2509 -2.4073 6.2055 15 6 7.4780 -1.9789 7.5053 16 6 8.4700 -2.5707 8.2630 17 6 9.2367 -3.5887 7.7267 18 6 10.3186 -4.2320 8.5553 19 8 11.2762 -3.2433 8.9390 20 14 11.1625 -5.5571 7.5539 21 6 9.0161 -4.0135 6.4295 22 6 8.0212 -3.4292 5.6699 23 6 2.2489 -1.9292 1.4002 24 1 -0.4849 -0.8401 -0.0004 25 1 -0.4851 0.8399 -0.0004 26 1 3.9633 -0.1891 -0.4279 27 1 4.1667 -1.9937 -0.3993 28 1 5.1021 -2.5558 1.7081 29 1 7.0203 -2.1827 3.5637 30 1 5.8467 -3.3785 4.1642 31 1 6.8795 -1.1837 7.9247 32 1 8.6475 -2.2373 9.2748 33 1 9.8773 -4.6761 9.4476 34 1 11.7098 -2.8055 8.1938 35 1 12.2313 -6.1998 8.3600 36 1 10.1717 -6.5752 7.1212 37 1 9.6195 -4.8056 6.0113 38 1 7.8461 -3.7647 4.6583 39 1 2.4065 -3.0075 1.3830 40 1 1.4694 -1.6254 2.0991 There are 56 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 56 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_12220716_2989410.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:20:46 Heat of formation + Delta-G solvation = -91.415627 kcal Electronic energy + Delta-G solvation = -24043.922659 eV Core-core repulsion = 20212.287333 eV Total energy + Delta-G solvation = -3831.635326 eV No. of doubly occupied orbitals = 56 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 307.130 amu Computer time = 0.76 seconds Orbital eigenvalues (eV) -41.84762 -41.36515 -40.39452 -39.07635 -38.26720 -37.10160 -34.84144 -34.46880 -32.39090 -31.72293 -29.84232 -26.88447 -26.74003 -26.09745 -24.06701 -22.94080 -22.33164 -21.72928 -20.33623 -19.51788 -18.55842 -18.13197 -18.04641 -18.00239 -17.44973 -17.14944 -16.85267 -16.43538 -16.03229 -15.89467 -15.66358 -15.52354 -15.42910 -15.00846 -14.63805 -14.34829 -14.30513 -13.77636 -13.65408 -13.52439 -13.40043 -13.27046 -13.05141 -12.24305 -12.07045 -12.05166 -11.87117 -11.73548 -11.66270 -11.05331 -10.96187 -10.70300 -10.39848 -10.17125 -10.04555 -9.22540 -4.97405 0.27391 0.30649 1.35478 1.40555 1.49204 1.54179 1.65824 2.00222 2.54358 2.60775 2.65812 3.37583 3.42412 3.52473 3.57475 3.71723 3.75422 3.83542 3.88959 3.96034 4.03702 4.10883 4.27341 4.30932 4.42297 4.51123 4.54036 4.67058 4.70014 4.80064 4.85874 4.97029 5.00217 5.07967 5.15714 5.25287 5.45849 5.49731 5.69887 5.83777 6.26686 6.42892 6.47866 6.80323 7.13589 7.30587 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.837 5.837 2 C 0.520 3.480 3 O -0.596 6.596 4 C -0.131 4.131 5 H 0.150 0.850 6 C -0.117 4.117 7 C 0.110 3.890 8 H 0.071 0.929 9 N -0.695 5.695 10 C 0.509 3.491 11 O -0.579 6.579 12 C 0.038 3.962 13 O -0.323 6.323 14 C 0.121 3.879 15 C -0.169 4.169 16 C -0.061 4.061 17 C -0.161 4.161 18 C -0.075 4.075 19 O -0.559 6.559 20 Si 0.785 3.215 21 C -0.075 4.075 22 C -0.198 4.198 23 C -0.122 4.122 24 H 0.419 0.581 25 H 0.405 0.595 26 H 0.065 0.935 27 H 0.136 0.864 28 H 0.426 0.574 29 H 0.130 0.870 30 H 0.130 0.870 31 H 0.124 0.876 32 H 0.131 0.869 33 H 0.102 0.898 34 H 0.395 0.605 35 H -0.304 1.304 36 H -0.279 1.279 37 H 0.155 0.845 38 H 0.168 0.832 39 H 0.131 0.869 40 H 0.063 0.937 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.094 -9.007 -8.385 12.306 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.400 5.400 2 C 0.305 3.695 3 O -0.476 6.476 4 C -0.153 4.153 5 H 0.167 0.833 6 C -0.155 4.155 7 C 0.005 3.995 8 H 0.089 0.911 9 N -0.349 5.349 10 C 0.296 3.704 11 O -0.458 6.458 12 C -0.040 4.040 13 O -0.236 6.236 14 C 0.075 3.925 15 C -0.187 4.187 16 C -0.079 4.079 17 C -0.162 4.162 18 C -0.185 4.185 19 O -0.367 6.367 20 Si 0.690 3.310 21 C -0.092 4.092 22 C -0.217 4.217 23 C -0.161 4.161 24 H 0.251 0.749 25 H 0.236 0.764 26 H 0.083 0.917 27 H 0.154 0.846 28 H 0.265 0.735 29 H 0.147 0.853 30 H 0.148 0.852 31 H 0.142 0.858 32 H 0.149 0.851 33 H 0.120 0.880 34 H 0.245 0.755 35 H -0.233 1.233 36 H -0.206 1.206 37 H 0.172 0.828 38 H 0.185 0.815 39 H 0.150 0.850 40 H 0.082 0.918 Dipole moment (debyes) X Y Z Total from point charges -0.113 -8.693 -7.389 11.409 hybrid contribution -0.998 0.420 0.582 1.229 sum -1.111 -8.273 -6.807 10.771 Atomic orbital electron populations 1.43768 1.06411 1.13825 1.76044 1.20771 0.83517 0.91143 0.74032 1.90765 1.69460 1.35590 1.51808 1.22266 0.96761 0.94628 1.01608 0.83277 1.23270 0.94356 1.04668 0.93193 1.22576 0.87543 0.95812 0.93605 0.91100 1.45621 1.36972 1.39618 1.12653 1.20734 0.84065 0.83028 0.82610 1.90774 1.55735 1.33956 1.65318 1.22774 0.99084 0.99918 0.82210 1.86134 1.52054 1.59655 1.25770 1.19214 0.88734 0.93225 0.91292 1.20619 1.01565 1.03653 0.92891 1.20889 0.92807 0.94526 0.99713 1.20371 1.00235 0.99705 0.95871 1.25220 0.90920 0.98947 1.03376 1.86461 1.56091 1.56010 1.38184 0.93727 0.78009 0.75799 0.83424 1.21082 0.96825 0.98740 0.92596 1.21520 0.98708 0.98518 1.02927 1.23458 0.96637 1.02172 0.93843 0.74910 0.76441 0.91651 0.84574 0.73520 0.85286 0.85202 0.85840 0.85061 0.88045 0.75525 1.23299 1.20597 0.82773 0.81486 0.85043 0.91767 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.84 4.16 8.87 -173.53 -1.54 2.62 16 2 C 0.52 1.06 7.35 87.66 0.64 1.71 16 3 O -0.60 -8.01 16.58 -3.06 -0.05 -8.06 16 4 C -0.13 0.81 4.35 -10.96 -0.05 0.76 16 5 H 0.15 -1.99 8.14 -2.39 -0.02 -2.01 16 6 C -0.12 0.58 7.20 31.12 0.22 0.80 16 7 C 0.11 -0.02 3.86 45.52 0.18 0.16 16 8 H 0.07 0.76 7.43 -2.39 -0.02 0.74 16 9 N -0.69 3.12 5.36 -440.05 -2.36 0.77 16 10 C 0.51 1.74 7.91 87.66 0.69 2.44 16 11 O -0.58 -9.75 16.12 16.00 0.26 -9.50 16 12 C 0.04 -0.14 5.22 71.24 0.37 0.23 16 13 O -0.32 -2.05 9.67 -73.34 -0.71 -2.76 16 14 C 0.12 0.42 6.69 22.51 0.15 0.57 16 15 C -0.17 -0.93 9.99 22.37 0.22 -0.71 16 16 C -0.06 -0.20 9.60 22.25 0.21 0.01 16 17 C -0.16 -0.03 5.39 -19.85 -0.11 -0.14 16 18 C -0.08 0.04 2.82 71.24 0.20 0.24 16 19 O -0.56 -0.43 12.76 -148.98 -1.90 -2.33 16 20 Si 0.78 -2.86 29.78 68.60 2.04 -0.82 16 21 C -0.08 0.25 8.66 22.26 0.19 0.44 16 22 C -0.20 0.63 9.04 22.37 0.20 0.83 16 23 C -0.12 0.73 7.47 31.18 0.23 0.96 16 24 H 0.42 -5.06 8.83 -92.70 -0.82 -5.87 16 25 H 0.40 -1.91 8.93 -92.71 -0.83 -2.74 16 26 H 0.06 0.10 7.43 -2.39 -0.02 0.09 16 27 H 0.14 -1.76 8.11 -2.39 -0.02 -1.78 16 28 H 0.43 -5.98 8.71 -92.71 -0.81 -6.78 16 29 H 0.13 -1.36 7.66 -2.39 -0.02 -1.38 16 30 H 0.13 -1.43 7.66 -2.39 -0.02 -1.45 16 31 H 0.12 0.80 8.06 -2.91 -0.02 0.78 16 32 H 0.13 0.36 8.06 -2.91 -0.02 0.34 16 33 H 0.10 0.12 7.96 -2.39 -0.02 0.10 16 34 H 0.39 -2.92 8.70 -74.06 -0.64 -3.56 16 35 H -0.30 -1.41 7.11 99.48 0.71 -0.70 16 36 H -0.28 0.04 7.11 99.48 0.71 0.75 16 37 H 0.16 -1.36 4.87 -2.91 -0.01 -1.37 16 38 H 0.17 -1.85 6.30 -2.91 -0.02 -1.87 16 39 H 0.13 -1.59 8.14 -2.39 -0.02 -1.61 16 40 H 0.06 -0.16 8.09 -2.39 -0.02 -0.18 16 Total: 0.00 -37.45 342.02 -2.82 -40.27 By element: Atomic # 1 Polarization: -26.58 SS G_CDS: -1.93 Total: -28.51 kcal Atomic # 6 Polarization: 4.94 SS G_CDS: 3.37 Total: 8.31 kcal Atomic # 7 Polarization: 7.28 SS G_CDS: -3.90 Total: 3.38 kcal Atomic # 8 Polarization: -20.24 SS G_CDS: -2.40 Total: -22.64 kcal Atomic # 14 Polarization: -2.86 SS G_CDS: 2.04 Total: -0.82 kcal Total: -37.45 -2.82 -40.27 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_12220716_2989410.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -51.144 kcal (2) G-P(sol) polarization free energy of solvation -37.451 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -88.595 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.820 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.271 kcal (6) G-S(sol) free energy of system = (1) + (5) -91.416 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.76 seconds