Wall clock time and date at job start Thu Mar 4 2021 13:20:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34780 * 1 3 3 O 1.21281 * 120.00054 * 2 1 4 4 C 1.50697 * 119.99600 * 179.97438 * 2 1 3 5 5 H 1.09000 * 112.85270 * 48.80729 * 4 2 1 6 6 C 1.53783 * 113.61253 * 180.02562 * 4 2 1 7 7 C 1.53784 * 87.07990 * 89.11804 * 6 4 2 8 8 H 1.09001 * 113.61442 * 270.79597 * 7 6 4 9 9 N 1.46496 * 113.61657 * 139.98018 * 7 6 4 10 10 C 1.34777 * 120.00271 * 154.99545 * 9 7 6 11 11 O 1.21278 * 119.99854 * 0.02562 * 10 9 7 12 12 C 1.50703 * 120.00161 * 180.02562 * 10 9 7 13 13 C 1.53000 * 109.46912 * 180.02562 * 12 10 9 14 14 O 1.42903 * 109.46726 * 180.02562 * 13 12 10 15 15 C 1.35904 * 116.99628 * 179.97438 * 14 13 12 16 16 C 1.38717 * 120.05444 * 179.72714 * 15 14 13 17 17 C 1.38163 * 119.94251 * 179.76312 * 16 15 14 18 18 C 1.50704 * 119.97104 * 180.22988 * 17 16 15 19 19 O 1.42902 * 109.47182 * 300.25707 * 18 17 16 20 20 Si 1.86294 * 109.47020 * 180.25738 * 18 17 16 21 21 C 1.38238 * 120.05648 * 0.48602 * 17 16 15 22 22 C 1.38287 * 120.11353 * 359.76519 * 21 17 16 23 23 C 1.38122 * 120.05288 * 0.02562 * 22 21 17 24 24 C 1.53779 * 113.61421 * 277.49855 * 4 2 1 25 25 H 0.96998 * 120.00606 * 179.97438 * 1 2 3 26 26 H 0.97001 * 119.99733 * 0.02562 * 1 2 3 27 27 H 1.08994 * 113.61465 * 334.56800 * 6 4 2 28 28 H 1.09006 * 113.68801 * 203.67406 * 6 4 2 29 29 H 0.97005 * 120.00266 * 335.00128 * 9 7 6 30 30 H 1.09002 * 109.47152 * 60.00245 * 12 10 9 31 31 H 1.09001 * 109.46980 * 300.00345 * 12 10 9 32 32 H 1.09001 * 109.47194 * 299.99742 * 13 12 10 33 33 H 1.08992 * 109.47399 * 59.99914 * 13 12 10 34 34 H 1.08001 * 120.02332 * 359.97438 * 16 15 14 35 35 H 1.08994 * 109.47125 * 60.25546 * 18 17 16 36 36 H 0.96702 * 113.99427 * 299.99975 * 19 18 17 37 37 H 1.48502 * 110.00319 * 58.67944 * 20 18 17 38 38 H 1.48506 * 110.00015 * 180.02562 * 20 18 17 39 39 H 1.08003 * 119.94376 * 179.74206 * 21 17 16 40 40 H 1.07998 * 119.97786 * 179.97438 * 22 21 17 41 41 H 1.08006 * 120.02697 * 180.02562 * 23 22 21 42 42 H 1.09008 * 113.61656 * 156.33575 * 24 4 2 43 43 H 1.08998 * 113.61798 * 25.43685 * 24 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3478 0.0000 0.0000 3 8 1.9542 1.0503 0.0000 4 6 2.1012 -1.3051 0.0006 5 1 1.7399 -2.0028 -0.7549 6 6 3.6295 -1.1342 0.0011 7 6 3.5484 -1.1190 1.5368 8 1 3.4006 -0.1240 1.9564 9 7 4.6335 -1.8560 2.1890 10 6 5.0021 -1.5401 3.4464 11 8 4.4351 -0.6460 4.0379 12 6 6.1188 -2.2979 4.1171 13 6 6.3346 -1.7455 5.5275 14 8 7.3939 -2.4637 6.1633 15 6 7.7155 -2.0945 7.4311 16 6 8.7302 -2.7529 8.1102 17 6 9.0584 -2.3725 9.3972 18 6 10.1642 -3.0839 10.1337 19 8 9.8433 -4.4716 10.2498 20 14 10.3531 -2.3458 11.8337 21 6 8.3699 -1.3434 10.0119 22 6 7.3544 -0.6889 9.3391 23 6 7.0253 -1.0625 8.0507 24 6 2.2499 -1.9299 1.3978 25 1 -0.4851 -0.8400 -0.0004 26 1 -0.4850 0.8401 -0.0004 27 1 3.9633 -0.1894 -0.4278 28 1 4.1665 -1.9941 -0.3993 29 1 5.0869 -2.5713 1.7160 30 1 7.0349 -2.1835 3.5376 31 1 5.8563 -3.3541 4.1771 32 1 6.5970 -0.6892 5.4679 33 1 5.4186 -1.8602 6.1068 34 1 9.2654 -3.5599 7.6319 35 1 11.0981 -2.9719 9.5831 36 1 9.0222 -4.6465 10.7298 37 1 9.0767 -2.4637 12.5834 38 1 11.4410 -3.0384 12.5701 39 1 8.6253 -1.0503 11.0196 40 1 6.8177 0.1145 9.8215 41 1 6.2324 -0.5508 7.5254 42 1 2.4084 -3.0083 1.3794 43 1 1.4699 -1.6277 2.0966 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_12220716_4549614.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:20:51 Heat of formation + Delta-G solvation = -99.383393 kcal Electronic energy + Delta-G solvation = -25688.699684 eV Core-core repulsion = 21701.181230 eV Total energy + Delta-G solvation = -3987.518454 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 321.145 amu Computer time = 1.02 seconds Orbital eigenvalues (eV) -41.80479 -41.33314 -40.52450 -39.19636 -38.37583 -37.38903 -34.82169 -34.45978 -33.18020 -32.49154 -30.85075 -27.50486 -26.87786 -26.74629 -25.15615 -23.69116 -22.84363 -22.09092 -21.48714 -20.29857 -19.38619 -18.28504 -18.22253 -18.04142 -17.70436 -17.51517 -17.19407 -17.12357 -16.84182 -16.28257 -16.06546 -15.80856 -15.67504 -15.47536 -14.97616 -14.79028 -14.44561 -14.37982 -14.13816 -14.05638 -13.52838 -13.32229 -13.26912 -13.02508 -12.93167 -12.86266 -12.41247 -12.00585 -11.86081 -11.83171 -11.67708 -11.58870 -11.09286 -10.98236 -10.70653 -10.68483 -10.12709 -9.95097 -9.29194 -4.90062 0.18036 0.37606 1.29612 1.47164 1.53776 1.62378 1.69954 1.96549 2.49284 2.53856 2.64417 3.38329 3.40363 3.42581 3.53660 3.63002 3.71944 3.83100 3.87524 3.88753 3.96551 4.07852 4.22037 4.26117 4.27640 4.38702 4.54568 4.54937 4.62316 4.65941 4.68853 4.74907 4.80065 4.85552 4.96756 4.99725 5.09940 5.24452 5.36480 5.42202 5.48476 5.68564 5.83593 6.30725 6.42449 6.46042 6.46910 7.15411 7.30146 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.837 5.837 2 C 0.521 3.479 3 O -0.595 6.595 4 C -0.132 4.132 5 H 0.147 0.853 6 C -0.120 4.120 7 C 0.109 3.891 8 H 0.075 0.925 9 N -0.701 5.701 10 C 0.517 3.483 11 O -0.588 6.588 12 C -0.131 4.131 13 C 0.074 3.926 14 O -0.323 6.323 15 C 0.116 3.884 16 C -0.140 4.140 17 C -0.082 4.082 18 C -0.086 4.086 19 O -0.548 6.548 20 Si 0.775 3.225 21 C -0.156 4.156 22 C -0.076 4.076 23 C -0.212 4.212 24 C -0.121 4.121 25 H 0.419 0.581 26 H 0.405 0.595 27 H 0.064 0.936 28 H 0.131 0.869 29 H 0.422 0.578 30 H 0.127 0.873 31 H 0.131 0.869 32 H 0.062 0.938 33 H 0.064 0.936 34 H 0.129 0.871 35 H 0.126 0.874 36 H 0.386 0.614 37 H -0.282 1.282 38 H -0.302 1.302 39 H 0.149 0.851 40 H 0.152 0.848 41 H 0.134 0.866 42 H 0.128 0.872 43 H 0.066 0.934 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.914 -4.366 -3.466 6.290 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.400 5.400 2 C 0.307 3.693 3 O -0.475 6.475 4 C -0.153 4.153 5 H 0.165 0.835 6 C -0.159 4.159 7 C 0.004 3.996 8 H 0.093 0.907 9 N -0.353 5.353 10 C 0.305 3.695 11 O -0.469 6.469 12 C -0.171 4.171 13 C -0.002 4.002 14 O -0.237 6.237 15 C 0.071 3.929 16 C -0.159 4.159 17 C -0.082 4.082 18 C -0.194 4.194 19 O -0.356 6.356 20 Si 0.679 3.321 21 C -0.174 4.174 22 C -0.094 4.094 23 C -0.231 4.231 24 C -0.160 4.160 25 H 0.251 0.749 26 H 0.236 0.764 27 H 0.083 0.917 28 H 0.149 0.851 29 H 0.261 0.739 30 H 0.145 0.855 31 H 0.149 0.851 32 H 0.081 0.919 33 H 0.082 0.918 34 H 0.147 0.853 35 H 0.144 0.856 36 H 0.236 0.764 37 H -0.208 1.208 38 H -0.230 1.230 39 H 0.166 0.834 40 H 0.170 0.830 41 H 0.152 0.848 42 H 0.146 0.854 43 H 0.085 0.915 Dipole moment (debyes) X Y Z Total from point charges -2.192 -3.541 -2.684 4.954 hybrid contribution -1.338 -0.764 -0.333 1.576 sum -3.530 -4.305 -3.017 6.332 Atomic orbital electron populations 1.43759 1.06361 1.13839 1.76038 1.20715 0.83516 0.91040 0.74047 1.90760 1.69450 1.35539 1.51796 1.22233 0.96680 0.94720 1.01697 0.83531 1.23273 0.94427 1.04405 0.93755 1.22551 0.87647 0.95977 0.93435 0.90652 1.45799 1.36972 1.38171 1.14361 1.20757 0.83720 0.82835 0.82178 1.90742 1.57317 1.33469 1.65354 1.21440 0.98864 1.02546 0.94200 1.22432 0.88833 0.95698 0.93207 1.85952 1.53119 1.59119 1.25521 1.19154 0.95074 0.94461 0.84214 1.20321 0.98620 1.02116 0.94820 1.20177 0.97524 0.96647 0.93859 1.25340 0.98604 0.84252 1.11234 1.86571 1.47211 1.22951 1.78852 0.93888 0.77680 0.88539 0.71949 1.21170 0.97647 0.97462 1.01094 1.21239 0.96000 0.98893 0.93237 1.21546 1.03459 1.00088 0.97962 1.23394 0.96762 1.02017 0.93839 0.74913 0.76394 0.91747 0.85105 0.73902 0.85483 0.85149 0.91932 0.91771 0.85306 0.85610 0.76448 1.20812 1.22988 0.83425 0.83044 0.84792 0.85373 0.91490 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.84 4.35 8.87 -173.53 -1.54 2.81 16 2 C 0.52 1.03 7.36 87.66 0.64 1.68 16 3 O -0.59 -7.87 16.58 -3.03 -0.05 -7.92 16 4 C -0.13 0.74 4.35 -11.01 -0.05 0.69 16 5 H 0.15 -1.82 8.14 -2.39 -0.02 -1.84 16 6 C -0.12 0.47 7.20 31.12 0.22 0.69 16 7 C 0.11 0.00 3.89 45.50 0.18 0.18 16 8 H 0.08 0.75 7.39 -2.39 -0.02 0.73 16 9 N -0.70 2.59 5.35 -440.14 -2.36 0.23 16 10 C 0.52 1.07 7.83 87.66 0.69 1.76 16 11 O -0.59 -7.30 15.58 -3.02 -0.05 -7.35 16 12 C -0.13 0.44 6.07 29.85 0.18 0.63 16 13 C 0.07 0.18 4.03 71.98 0.29 0.47 16 14 O -0.32 -1.67 10.14 -92.47 -0.94 -2.61 16 15 C 0.12 0.70 6.69 22.51 0.15 0.85 16 16 C -0.14 -0.74 9.55 22.37 0.21 -0.53 16 17 C -0.08 -0.19 5.39 -19.88 -0.11 -0.30 16 18 C -0.09 -0.06 2.82 71.24 0.20 0.14 16 19 O -0.55 -2.08 12.76 -148.98 -1.90 -3.98 16 20 Si 0.77 -1.17 29.79 68.60 2.04 0.87 16 21 C -0.16 -0.05 8.67 22.28 0.19 0.14 16 22 C -0.08 -0.08 10.04 22.25 0.22 0.14 16 23 C -0.21 -0.86 9.04 22.36 0.20 -0.65 16 24 C -0.12 0.70 7.45 31.10 0.23 0.94 16 25 H 0.42 -5.12 8.83 -92.71 -0.82 -5.93 16 26 H 0.41 -2.07 8.93 -92.71 -0.83 -2.89 16 27 H 0.06 0.16 7.43 -2.39 -0.02 0.15 16 28 H 0.13 -1.43 8.12 -2.38 -0.02 -1.45 16 29 H 0.42 -4.85 8.73 -92.70 -0.81 -5.65 16 30 H 0.13 -0.89 8.14 -2.39 -0.02 -0.91 16 31 H 0.13 -1.02 8.14 -2.39 -0.02 -1.04 16 32 H 0.06 0.27 7.62 -2.39 -0.02 0.25 16 33 H 0.06 0.24 7.62 -2.39 -0.02 0.22 16 34 H 0.13 0.71 8.06 -2.91 -0.02 0.68 16 35 H 0.13 -0.10 7.96 -2.39 -0.02 -0.12 16 36 H 0.39 -0.69 8.70 -74.06 -0.64 -1.33 16 37 H -0.28 -0.59 7.11 99.48 0.71 0.12 16 38 H -0.30 -1.81 7.11 99.48 0.71 -1.10 16 39 H 0.15 -0.63 4.87 -2.91 -0.01 -0.64 16 40 H 0.15 -0.57 8.06 -2.91 -0.02 -0.59 16 41 H 0.13 0.40 6.30 -2.91 -0.02 0.38 16 42 H 0.13 -1.44 8.14 -2.38 -0.02 -1.46 16 43 H 0.07 -0.20 8.09 -2.39 -0.02 -0.22 16 Total: 0.00 -30.49 362.94 -3.30 -33.79 By element: Atomic # 1 Polarization: -20.69 SS G_CDS: -1.97 Total: -22.66 kcal Atomic # 6 Polarization: 3.36 SS G_CDS: 3.46 Total: 6.82 kcal Atomic # 7 Polarization: 6.94 SS G_CDS: -3.90 Total: 3.04 kcal Atomic # 8 Polarization: -18.93 SS G_CDS: -2.94 Total: -21.87 kcal Atomic # 14 Polarization: -1.17 SS G_CDS: 2.04 Total: 0.87 kcal Total: -30.49 -3.30 -33.79 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_12220716_4549614.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -65.593 kcal (2) G-P(sol) polarization free energy of solvation -30.493 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -96.086 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.297 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.791 kcal (6) G-S(sol) free energy of system = (1) + (5) -99.383 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.02 seconds