Wall clock time and date at job start Thu Mar 4 2021 13:21:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 C 1.36551 * 126.64744 * 2 1 4 4 C 1.46660 * 125.98472 * 359.95864 * 3 2 1 5 5 O 1.21700 * 119.99926 * 359.71266 * 4 3 2 6 6 N 1.34774 * 119.99944 * 179.72232 * 4 3 2 7 7 C 1.46499 * 119.99884 * 180.02562 * 6 4 3 8 8 H 1.08998 * 112.85087 * 336.18504 * 7 6 4 9 9 C 1.53777 * 113.61486 * 107.49951 * 7 6 4 10 10 C 1.53785 * 87.08241 * 139.97730 * 9 7 6 11 11 H 1.09002 * 113.61570 * 220.01842 * 10 9 7 12 12 C 1.50701 * 113.69000 * 89.12299 * 10 9 7 13 13 N 1.34775 * 119.99783 * 80.93572 * 12 10 9 14 14 O 1.21281 * 120.00144 * 260.93299 * 12 10 9 15 15 C 1.53781 * 87.08241 * 334.56547 * 10 9 7 16 16 O 1.34907 * 108.02426 * 179.69534 * 3 2 1 17 17 C 1.33928 * 109.38595 * 0.26283 * 16 3 2 18 18 C 1.50699 * 125.61613 * 179.97438 * 17 16 3 19 19 O 1.42905 * 109.46838 * 270.02107 * 18 17 16 20 20 C 1.35899 * 116.99784 * 180.02562 * 19 18 17 21 21 C 1.38734 * 120.05909 * 359.72653 * 20 19 18 22 22 C 1.38145 * 119.94658 * 179.74510 * 21 20 19 23 23 C 1.38266 * 120.05197 * 0.50793 * 22 21 20 24 24 C 1.50702 * 119.94385 * 179.74680 * 23 22 21 25 25 O 1.42897 * 109.47262 * 245.02287 * 24 23 22 26 26 Si 1.86308 * 109.46949 * 5.02035 * 24 23 22 27 27 C 1.38258 * 120.11433 * 359.76711 * 23 22 21 28 28 C 1.38151 * 120.05813 * 359.97438 * 27 23 22 29 29 C 1.35132 * 108.76944 * 359.97438 * 17 16 3 30 30 H 1.08995 * 109.46896 * 90.00141 * 1 2 3 31 31 H 1.09000 * 109.47355 * 210.00582 * 1 2 3 32 32 H 1.09004 * 109.46963 * 330.00337 * 1 2 3 33 33 H 0.97004 * 120.00019 * 359.97438 * 6 4 3 34 34 H 1.08999 * 113.61947 * 25.43156 * 9 7 6 35 35 H 1.08997 * 113.61348 * 254.52371 * 9 7 6 36 36 H 0.97003 * 120.00033 * 0.02562 * 13 12 10 37 37 H 0.97009 * 119.99964 * 179.97438 * 13 12 10 38 38 H 1.09000 * 113.61578 * 139.97748 * 15 10 9 39 39 H 1.08997 * 113.61673 * 270.88717 * 15 10 9 40 40 H 1.08998 * 109.47217 * 30.01792 * 18 17 16 41 41 H 1.08999 * 109.47286 * 150.02484 * 18 17 16 42 42 H 1.08003 * 120.02687 * 359.97438 * 21 20 19 43 43 H 1.07999 * 119.97296 * 180.23068 * 22 21 20 44 44 H 1.08993 * 109.47527 * 125.01951 * 24 23 22 45 45 H 0.96702 * 113.99986 * 59.99503 * 25 24 23 46 46 H 1.48493 * 109.99688 * 58.68312 * 26 24 23 47 47 H 1.48501 * 109.99693 * 180.02562 * 26 24 23 48 48 H 1.08007 * 119.97619 * 179.97438 * 27 23 22 49 49 H 1.07996 * 120.03189 * 179.97438 * 28 27 23 50 50 H 1.07997 * 126.44373 * 179.97438 * 29 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3221 1.0956 0.0000 4 6 1.8843 2.4953 -0.0009 5 8 0.6967 2.7614 -0.0069 6 7 2.7971 3.4869 0.0049 7 6 2.3598 4.8851 0.0046 8 1 1.3584 5.0153 -0.4057 9 6 2.5737 5.5977 1.3504 10 6 3.0085 6.8298 0.5394 11 1 3.8576 7.3595 0.9714 12 6 1.8701 7.7475 0.1751 13 7 1.4037 8.6336 1.0772 14 8 1.3735 7.6888 -0.9299 15 6 3.3977 5.8550 -0.5845 16 8 3.6005 0.6648 0.0068 17 6 3.6183 -0.6744 0.0054 18 6 4.8550 -1.5356 0.0109 19 8 5.2532 -1.8058 -1.3347 20 6 6.3595 -2.5759 -1.5078 21 6 7.0509 -3.0568 -0.4054 22 6 8.1721 -3.8438 -0.5841 23 6 8.6114 -4.1436 -1.8603 24 6 9.8381 -4.9976 -2.0524 25 8 10.8661 -4.2223 -2.6723 26 14 10.4346 -5.6091 -0.3967 27 6 7.9275 -3.6608 -2.9607 28 6 6.8026 -2.8778 -2.7874 29 6 2.3448 -1.1262 -0.0019 30 1 -0.3633 0.0000 -1.0276 31 1 -0.3634 -0.8899 0.5139 32 1 -0.3633 0.8901 0.5138 33 1 3.7436 3.2747 0.0100 34 1 3.3741 5.1656 1.9510 35 1 1.6539 5.7492 1.9153 36 1 1.8011 8.6809 1.9608 37 1 0.6711 9.2247 0.8425 38 1 3.1431 6.2141 -1.5816 39 1 4.4234 5.4931 -0.5129 40 1 5.6589 -1.0136 0.5298 41 1 4.6417 -2.4743 0.5221 42 1 6.7107 -2.8192 0.5917 43 1 8.7085 -4.2216 0.2738 44 1 9.5925 -5.8490 -2.6871 45 1 11.1355 -3.4465 -2.1618 46 1 9.3633 -6.3902 0.2721 47 1 11.6444 -6.4521 -0.5724 48 1 8.2729 -3.8960 -3.9566 49 1 6.2689 -2.5006 -3.6471 50 1 2.0307 -2.1595 -0.0052 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_22_12220716_4549632.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:21:02 Heat of formation + Delta-G solvation = -69.338986 kcal Electronic energy + Delta-G solvation = -34173.474402 eV Core-core repulsion = 29328.360539 eV Total energy + Delta-G solvation = -4845.113863 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 387.161 amu Computer time = 1.33 seconds Orbital eigenvalues (eV) -43.88649 -41.73962 -41.36028 -40.23356 -39.27994 -38.33442 -37.23119 -35.40123 -34.71398 -34.32431 -33.19405 -32.11669 -31.55803 -28.90583 -28.61065 -26.88866 -26.75571 -26.21718 -24.22246 -23.29409 -22.70811 -22.31575 -22.20330 -20.93499 -20.30250 -19.55677 -19.13429 -18.37772 -18.26723 -18.12308 -17.47458 -17.40782 -17.20428 -16.98829 -16.67225 -16.28709 -16.01211 -15.97266 -15.76457 -15.49965 -15.42074 -15.20054 -14.75101 -14.66926 -14.37188 -14.28831 -14.20685 -14.02452 -13.84419 -13.72814 -13.67812 -13.56843 -13.41378 -13.40677 -13.10888 -12.75685 -12.28867 -12.12972 -12.09450 -11.91193 -11.80330 -11.74327 -11.13875 -10.92842 -10.75422 -10.70922 -10.45432 -10.22000 -10.11147 -9.64846 -9.29709 -5.08648 -0.17674 0.22225 0.23451 1.00043 1.26017 1.39045 1.56422 1.58990 1.94099 2.01840 2.09948 2.32199 2.42352 2.59380 3.24519 3.28545 3.31461 3.44699 3.58222 3.59385 3.65398 3.66499 3.71869 3.73475 3.81151 3.87397 3.93650 4.14403 4.20581 4.32660 4.37225 4.40020 4.45631 4.47097 4.47265 4.59673 4.62043 4.66871 4.72867 4.81269 4.88395 4.90281 4.98647 5.00281 5.08487 5.13336 5.18182 5.33142 5.44322 5.45759 5.61664 5.73496 5.75117 6.19892 6.28367 6.37734 6.54994 7.02003 7.23730 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.098 4.098 2 C -0.083 4.083 3 C -0.074 4.074 4 C 0.606 3.394 5 O -0.510 6.510 6 N -0.710 5.710 7 C 0.122 3.878 8 H 0.124 0.876 9 C -0.135 4.135 10 C -0.140 4.140 11 H 0.112 0.888 12 C 0.533 3.467 13 N -0.852 5.852 14 O -0.535 6.535 15 C -0.127 4.127 16 O -0.155 6.155 17 C 0.010 3.990 18 C 0.140 3.860 19 O -0.308 6.308 20 C 0.135 3.865 21 C -0.205 4.205 22 C -0.074 4.074 23 C -0.156 4.156 24 C -0.063 4.063 25 O -0.541 6.541 26 Si 0.684 3.316 27 C -0.051 4.051 28 C -0.147 4.147 29 C -0.182 4.182 30 H 0.077 0.923 31 H 0.070 0.930 32 H 0.088 0.912 33 H 0.406 0.594 34 H 0.099 0.901 35 H 0.079 0.921 36 H 0.403 0.597 37 H 0.404 0.596 38 H 0.094 0.906 39 H 0.097 0.903 40 H 0.087 0.913 41 H 0.102 0.898 42 H 0.133 0.867 43 H 0.130 0.870 44 H 0.113 0.887 45 H 0.379 0.621 46 H -0.258 1.258 47 H -0.254 1.254 48 H 0.134 0.866 49 H 0.135 0.865 50 H 0.161 0.839 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.259 1.541 7.036 8.368 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C -0.086 4.086 3 C -0.126 4.126 4 C 0.393 3.607 5 O -0.387 6.387 6 N -0.360 5.360 7 C 0.018 3.982 8 H 0.142 0.858 9 C -0.175 4.175 10 C -0.162 4.162 11 H 0.130 0.870 12 C 0.317 3.683 13 N -0.416 5.416 14 O -0.411 6.411 15 C -0.165 4.165 16 O -0.052 6.052 17 C -0.041 4.041 18 C 0.065 3.935 19 O -0.222 6.222 20 C 0.090 3.910 21 C -0.223 4.223 22 C -0.091 4.091 23 C -0.157 4.157 24 C -0.174 4.174 25 O -0.346 6.346 26 Si 0.586 3.414 27 C -0.069 4.069 28 C -0.165 4.165 29 C -0.202 4.202 30 H 0.096 0.904 31 H 0.089 0.911 32 H 0.107 0.893 33 H 0.242 0.758 34 H 0.118 0.882 35 H 0.098 0.902 36 H 0.231 0.769 37 H 0.235 0.765 38 H 0.112 0.888 39 H 0.115 0.885 40 H 0.105 0.895 41 H 0.119 0.881 42 H 0.151 0.849 43 H 0.148 0.852 44 H 0.130 0.870 45 H 0.226 0.774 46 H -0.183 1.183 47 H -0.179 1.179 48 H 0.152 0.848 49 H 0.152 0.848 50 H 0.179 0.821 Dipole moment (debyes) X Y Z Total from point charges 3.435 0.688 6.177 7.101 hybrid contribution 0.006 -0.024 0.143 0.145 sum 3.441 0.664 6.320 7.227 Atomic orbital electron populations 1.20480 0.87674 1.03923 1.03339 1.20694 0.97954 0.90689 0.99251 1.21880 0.81162 0.94841 1.14746 1.16528 0.85851 0.81764 0.76574 1.90890 1.15619 1.82160 1.50010 1.45873 1.09813 1.05777 1.74549 1.22731 1.00777 0.78260 0.96456 0.85804 1.23441 1.02945 0.93843 0.97226 1.22232 0.98039 0.95510 1.00385 0.86968 1.20060 0.83480 0.80319 0.84459 1.43821 1.39976 1.40414 1.17348 1.90788 1.59144 1.69460 1.21739 1.23251 0.99329 0.94183 0.99730 1.83963 1.28504 1.21751 1.70963 1.21891 0.95925 0.80649 1.05683 1.20945 0.92007 0.97125 0.83410 1.86161 1.41999 1.66159 1.27861 1.18988 0.86285 0.91381 0.94343 1.21192 0.99010 1.03997 0.98142 1.20778 0.95682 0.96540 0.96130 1.20260 0.99294 1.02681 0.93440 1.24978 0.87055 0.96337 1.09074 1.86510 1.54701 1.42956 1.50434 0.94872 0.81132 0.86465 0.78948 1.20865 0.92646 0.94307 0.99096 1.20536 0.98630 1.02326 0.95025 1.21609 0.91158 1.00612 1.06794 0.90393 0.91072 0.89325 0.75828 0.88249 0.90197 0.76882 0.76469 0.88766 0.88482 0.89494 0.88052 0.84902 0.85239 0.86992 0.77396 1.18289 1.17944 0.84812 0.84755 0.82101 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 -0.15 9.81 36.01 0.35 0.21 16 2 C -0.08 -0.19 6.20 -104.43 -0.65 -0.84 16 3 C -0.07 -0.20 7.13 -36.79 -0.26 -0.46 16 4 C 0.61 1.92 7.79 -12.86 -0.10 1.82 16 5 O -0.51 -3.04 14.34 5.19 0.07 -2.97 16 6 N -0.71 -0.23 5.35 -54.33 -0.29 -0.52 16 7 C 0.12 0.04 3.91 -67.11 -0.26 -0.22 16 8 H 0.12 0.42 7.46 -51.93 -0.39 0.03 16 9 C -0.14 0.28 7.46 -25.92 -0.19 0.09 16 10 C -0.14 0.29 4.34 -90.96 -0.39 -0.11 16 11 H 0.11 -0.49 8.14 -51.93 -0.42 -0.91 16 12 C 0.53 0.37 7.35 -10.99 -0.08 0.29 16 13 N -0.85 2.19 8.87 31.22 0.28 2.47 16 14 O -0.54 -2.91 16.67 5.56 0.09 -2.82 16 15 C -0.13 0.15 7.21 -25.91 -0.19 -0.04 16 16 O -0.16 -0.25 10.40 5.03 0.05 -0.19 16 17 C 0.01 0.01 6.94 -35.41 -0.25 -0.24 16 18 C 0.14 -0.24 5.27 36.01 0.19 -0.05 16 19 O -0.31 -0.27 10.12 -19.42 -0.20 -0.47 16 20 C 0.14 0.06 6.69 -39.21 -0.26 -0.21 16 21 C -0.20 0.25 9.04 -39.43 -0.36 -0.11 16 22 C -0.07 0.10 8.66 -39.61 -0.34 -0.25 16 23 C -0.16 0.06 5.35 -104.60 -0.56 -0.50 16 24 C -0.06 0.04 2.80 36.01 0.10 0.14 16 25 O -0.54 0.05 12.83 -35.23 -0.45 -0.40 16 26 Si 0.68 -1.03 29.80 -169.99 -5.07 -6.10 16 27 C -0.05 -0.01 9.68 -39.61 -0.38 -0.39 16 28 C -0.15 -0.09 9.99 -39.43 -0.39 -0.48 16 29 C -0.18 -0.13 10.73 -39.89 -0.43 -0.56 16 30 H 0.08 0.11 8.14 -51.93 -0.42 -0.31 16 31 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 32 H 0.09 0.26 6.45 -51.93 -0.34 -0.08 16 33 H 0.41 -0.75 8.48 -40.82 -0.35 -1.09 16 34 H 0.10 -0.35 8.14 -51.93 -0.42 -0.77 16 35 H 0.08 -0.12 8.10 -51.93 -0.42 -0.54 16 36 H 0.40 -2.23 8.83 -40.82 -0.36 -2.59 16 37 H 0.40 -1.13 8.93 -40.82 -0.36 -1.49 16 38 H 0.09 0.09 7.41 -51.93 -0.38 -0.29 16 39 H 0.10 -0.32 8.12 -51.93 -0.42 -0.74 16 40 H 0.09 -0.30 7.65 -51.93 -0.40 -0.69 16 41 H 0.10 -0.40 7.67 -51.93 -0.40 -0.80 16 42 H 0.13 -0.49 6.30 -52.48 -0.33 -0.82 16 43 H 0.13 -0.44 4.90 -52.49 -0.26 -0.70 16 44 H 0.11 -0.02 7.96 -51.93 -0.41 -0.43 16 45 H 0.38 -1.50 8.70 45.56 0.40 -1.10 16 46 H -0.26 -0.21 7.11 56.52 0.40 0.19 16 47 H -0.25 -0.49 7.11 56.52 0.40 -0.08 16 48 H 0.13 -0.07 8.06 -52.48 -0.42 -0.49 16 49 H 0.13 0.00 8.06 -52.49 -0.42 -0.42 16 50 H 0.16 -0.23 8.06 -52.49 -0.42 -0.65 16 LS Contribution 422.64 15.07 6.37 6.37 Total: 0.00 -11.60 422.64 -10.17 -21.78 By element: Atomic # 1 Polarization: -8.66 SS G_CDS: -6.58 Total: -15.24 kcal Atomic # 6 Polarization: 2.55 SS G_CDS: -4.46 Total: -1.91 kcal Atomic # 7 Polarization: 1.96 SS G_CDS: -0.01 Total: 1.95 kcal Atomic # 8 Polarization: -6.42 SS G_CDS: -0.43 Total: -6.85 kcal Atomic # 14 Polarization: -1.03 SS G_CDS: -5.07 Total: -6.10 kcal Total LS contribution 6.37 Total: 6.37 kcal Total: -11.60 -10.17 -21.78 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_12220716_4549632.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -47.561 kcal (2) G-P(sol) polarization free energy of solvation -11.604 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -59.165 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.174 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.778 kcal (6) G-S(sol) free energy of system = (1) + (5) -69.339 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.33 seconds