Wall clock time and date at job start Thu Mar 4 2021 13:21:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34777 * 1 3 3 O 1.21283 * 120.00025 * 2 1 4 4 C 1.50695 * 120.00285 * 180.02562 * 2 1 3 5 5 H 1.09003 * 112.84957 * 48.79805 * 4 2 1 6 6 C 1.53781 * 113.61779 * 179.97438 * 4 2 1 7 7 C 1.53785 * 87.08191 * 89.19695 * 6 4 2 8 8 H 1.09000 * 113.61485 * 270.80546 * 7 6 4 9 9 N 1.46501 * 113.61351 * 139.98175 * 7 6 4 10 10 C 1.34778 * 119.99698 * 155.00108 * 9 7 6 11 11 O 1.21611 * 120.00108 * 359.97438 * 10 9 7 12 12 C 1.47372 * 119.99756 * 180.02562 * 10 9 7 13 13 C 1.36425 * 127.19341 * 179.97438 * 12 10 9 14 14 C 1.50705 * 125.79769 * 359.97438 * 13 12 10 15 15 O 1.42900 * 109.47259 * 89.71644 * 14 13 12 16 16 C 1.35899 * 116.99982 * 179.97438 * 15 14 13 17 17 C 1.38729 * 120.05294 * 180.02562 * 16 15 14 18 18 C 1.38146 * 119.94031 * 179.97438 * 17 16 15 19 19 C 1.38263 * 120.05914 * 359.97438 * 18 17 16 20 20 C 1.50697 * 119.94583 * 179.97438 * 19 18 17 21 21 O 1.42895 * 109.47590 * 300.00259 * 20 19 18 22 22 Si 1.86300 * 109.47007 * 179.97438 * 20 19 18 23 23 C 1.38271 * 120.10967 * 0.27730 * 19 18 17 24 24 C 1.38148 * 120.05274 * 359.44682 * 23 19 18 25 25 O 1.33654 * 108.39866 * 179.73570 * 13 12 10 26 26 C 1.34216 * 110.90531 * 0.26150 * 25 13 12 27 27 C 1.34175 * 109.12800 * 0.02562 * 26 25 13 28 28 C 1.53784 * 87.07971 * 25.43437 * 7 6 4 29 29 H 0.97002 * 119.99563 * 179.97438 * 1 2 3 30 30 H 0.97005 * 120.00045 * 0.02562 * 1 2 3 31 31 H 1.09000 * 113.61159 * 334.64730 * 6 4 2 32 32 H 1.08993 * 113.69197 * 203.75780 * 6 4 2 33 33 H 0.96996 * 120.00240 * 335.00401 * 9 7 6 34 34 H 1.09003 * 109.46942 * 329.71158 * 14 13 12 35 35 H 1.08997 * 109.46856 * 209.71833 * 14 13 12 36 36 H 1.07994 * 120.03032 * 359.95651 * 17 16 15 37 37 H 1.07997 * 119.97046 * 180.02562 * 18 17 16 38 38 H 1.09001 * 109.46613 * 60.00397 * 20 19 18 39 39 H 0.96695 * 114.00385 * 180.02562 * 21 20 19 40 40 H 1.48506 * 110.00048 * 60.00676 * 22 20 19 41 41 H 1.48502 * 109.99996 * 181.32001 * 22 20 19 42 42 H 1.07996 * 119.97194 * 179.72944 * 23 19 18 43 43 H 1.07999 * 120.02648 * 180.26899 * 24 23 19 44 44 H 1.08003 * 125.43256 * 180.02562 * 26 25 13 45 45 H 1.07998 * 127.02487 * 180.02562 * 27 26 25 46 46 H 1.09003 * 113.61278 * 89.11526 * 28 7 6 47 47 H 1.09004 * 113.61115 * 220.02136 * 28 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3478 0.0000 0.0000 3 8 1.9542 1.0503 0.0000 4 6 2.1013 -1.3050 -0.0006 5 1 1.7400 -2.0021 -0.7567 6 6 3.6296 -1.1340 -0.0011 7 6 3.5500 -1.1217 1.5346 8 1 3.4024 -0.1274 1.9562 9 7 4.6359 -1.8598 2.1845 10 6 5.0055 -1.5462 3.4420 11 8 4.4380 -0.6502 4.0371 12 6 6.0982 -2.2883 4.0956 13 6 6.5890 -2.0953 5.3537 14 6 6.1025 -1.0664 6.3416 15 8 5.0523 -1.6253 7.1332 16 6 4.4993 -0.8224 8.0800 17 6 3.4754 -1.3006 8.8847 18 6 2.9153 -0.4826 9.8468 19 6 3.3746 0.8114 10.0084 20 6 2.7613 1.7017 11.0583 21 8 1.3663 1.8604 10.7927 22 14 3.5943 3.3678 11.0234 23 6 4.3914 1.2921 9.2041 24 6 4.9587 0.4763 8.2444 25 8 7.5711 -2.9774 5.5633 26 6 7.7579 -3.7518 4.4831 27 6 6.8897 -3.3889 3.5266 28 6 2.2509 -1.9328 1.3953 29 1 -0.4849 -0.8401 -0.0004 30 1 -0.4850 0.8401 -0.0004 31 1 3.9629 -0.1884 -0.4287 32 1 4.1663 -1.9930 -0.4036 33 1 5.0888 -2.5741 1.7097 34 1 5.7282 -0.1952 5.8040 35 1 6.9262 -0.7671 6.9896 36 1 3.1164 -2.3114 8.7590 37 1 2.1185 -0.8546 10.4738 38 1 2.8950 1.2496 12.0411 39 1 0.9060 2.4233 11.4302 40 1 3.4199 3.9949 9.6886 41 1 3.0203 4.2447 12.0754 42 1 4.7454 2.3047 9.3293 43 1 5.7558 0.8507 7.6193 44 1 8.4902 -4.5410 4.3976 45 1 6.7892 -3.8208 2.5418 46 1 2.4095 -3.0110 1.3745 47 1 1.4712 -1.6319 2.0952 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_12220716_4549634.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:21:05 Heat of formation + Delta-G solvation = -69.819155 kcal Electronic energy + Delta-G solvation = -33112.556185 eV Core-core repulsion = 28422.959120 eV Total energy + Delta-G solvation = -4689.597065 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 373.145 amu Computer time = 1.45 seconds Orbital eigenvalues (eV) -43.71833 -41.74785 -41.30511 -40.34955 -39.19677 -38.37141 -37.40552 -34.92929 -34.61759 -33.77023 -32.87808 -32.01797 -31.49948 -28.25544 -27.08267 -26.77409 -26.13334 -24.62958 -23.83136 -22.94823 -22.28746 -21.98239 -21.18004 -20.23637 -19.52162 -19.12346 -18.56042 -18.20939 -18.07919 -17.66231 -17.24830 -17.19382 -16.99485 -16.79668 -16.69747 -16.05824 -16.03310 -15.74690 -15.62422 -15.58919 -15.32097 -14.80012 -14.53125 -14.42107 -14.23035 -14.11776 -13.89597 -13.83592 -13.59214 -13.42359 -13.34607 -13.23505 -12.99177 -12.55470 -12.18041 -11.95860 -11.88558 -11.79049 -11.70156 -11.18740 -11.02278 -10.97107 -10.73090 -10.50590 -10.17582 -10.08187 -9.82660 -9.25602 -4.95710 -0.05501 0.23043 0.26594 1.04083 1.28920 1.50122 1.51225 1.57210 1.93597 2.01692 2.13559 2.44407 2.51346 2.57879 3.33233 3.34982 3.39720 3.40032 3.58726 3.67401 3.70267 3.75704 3.78700 3.85825 3.91415 3.93600 4.09271 4.23855 4.25277 4.38866 4.42672 4.45742 4.47474 4.63791 4.64766 4.66028 4.77442 4.80680 4.82685 4.91949 4.97161 5.06481 5.11607 5.21387 5.28177 5.44906 5.45075 5.64753 5.81127 5.88783 6.22200 6.39947 6.44058 6.59698 7.10117 7.27712 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.837 5.837 2 C 0.522 3.478 3 O -0.595 6.595 4 C -0.129 4.129 5 H 0.150 0.850 6 C -0.117 4.117 7 C 0.111 3.889 8 H 0.076 0.924 9 N -0.693 5.693 10 C 0.580 3.420 11 O -0.578 6.578 12 C -0.224 4.224 13 C 0.040 3.960 14 C 0.134 3.866 15 O -0.320 6.320 16 C 0.124 3.876 17 C -0.161 4.161 18 C -0.058 4.058 19 C -0.124 4.124 20 C -0.079 4.079 21 O -0.559 6.559 22 Si 0.759 3.241 23 C -0.079 4.079 24 C -0.207 4.207 25 O -0.176 6.176 26 C -0.011 4.011 27 C -0.194 4.194 28 C -0.123 4.123 29 H 0.419 0.581 30 H 0.405 0.595 31 H 0.066 0.934 32 H 0.133 0.867 33 H 0.419 0.581 34 H 0.101 0.899 35 H 0.104 0.896 36 H 0.137 0.863 37 H 0.143 0.857 38 H 0.099 0.901 39 H 0.395 0.605 40 H -0.305 1.305 41 H -0.282 1.282 42 H 0.146 0.854 43 H 0.147 0.853 44 H 0.254 0.746 45 H 0.196 0.804 46 H 0.127 0.873 47 H 0.064 0.936 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.357 -8.034 -2.286 8.679 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.400 5.400 2 C 0.307 3.693 3 O -0.475 6.475 4 C -0.151 4.151 5 H 0.167 0.833 6 C -0.156 4.156 7 C 0.005 3.995 8 H 0.094 0.906 9 N -0.344 5.344 10 C 0.369 3.631 11 O -0.459 6.459 12 C -0.229 4.229 13 C -0.013 4.013 14 C 0.060 3.940 15 O -0.235 6.235 16 C 0.079 3.921 17 C -0.180 4.180 18 C -0.076 4.076 19 C -0.124 4.124 20 C -0.187 4.187 21 O -0.369 6.369 22 Si 0.665 3.335 23 C -0.097 4.097 24 C -0.225 4.225 25 O -0.071 6.071 26 C -0.076 4.076 27 C -0.213 4.213 28 C -0.162 4.162 29 H 0.251 0.749 30 H 0.236 0.764 31 H 0.085 0.915 32 H 0.151 0.849 33 H 0.258 0.742 34 H 0.119 0.881 35 H 0.122 0.878 36 H 0.155 0.845 37 H 0.161 0.839 38 H 0.117 0.883 39 H 0.245 0.755 40 H -0.233 1.233 41 H -0.209 1.209 42 H 0.163 0.837 43 H 0.165 0.835 44 H 0.270 0.730 45 H 0.213 0.787 46 H 0.145 0.855 47 H 0.083 0.917 Dipole moment (debyes) X Y Z Total from point charges 2.657 -6.617 -2.273 7.484 hybrid contribution -1.652 0.240 -0.184 1.680 sum 1.005 -6.377 -2.457 6.908 Atomic orbital electron populations 1.43761 1.06380 1.13829 1.76057 1.20709 0.83506 0.91043 0.74034 1.90759 1.69442 1.35527 1.51779 1.22220 0.96678 0.94713 1.01482 0.83259 1.23270 0.94414 1.04580 0.93316 1.22607 0.87332 0.95875 0.93638 0.90604 1.45587 1.36922 1.38100 1.13776 1.17593 0.81631 0.81870 0.82007 1.90791 1.56713 1.33152 1.65255 1.21376 1.02029 1.03202 0.96280 1.22003 0.90727 0.93697 0.94859 1.21124 0.89778 0.91916 0.91218 1.86038 1.50490 1.40662 1.46281 1.19166 0.93836 0.90119 0.89010 1.20638 0.97677 1.01979 0.97709 1.20965 0.97749 0.92650 0.96223 1.19442 0.98440 0.95094 0.99417 1.24919 0.85462 1.08964 0.99398 1.86551 1.20278 1.72826 1.57289 0.94277 0.89244 0.73172 0.76788 1.20968 0.95481 0.99571 0.93654 1.21390 1.04808 0.93458 1.02863 1.83795 1.44838 1.38053 1.40443 1.24954 1.02527 0.96813 0.83344 1.23264 0.97397 0.97577 1.03060 1.23418 0.96724 1.01996 0.94049 0.74923 0.76398 0.91492 0.84943 0.74248 0.88126 0.87836 0.84481 0.83949 0.88315 0.75492 1.23260 1.20890 0.83652 0.83508 0.72986 0.78725 0.85454 0.91706 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.84 2.85 8.87 -173.53 -1.54 1.31 16 2 C 0.52 1.95 7.36 87.66 0.65 2.59 16 3 O -0.59 -8.86 16.59 -3.04 -0.05 -8.91 16 4 C -0.13 0.50 4.34 -11.01 -0.05 0.45 16 5 H 0.15 -1.67 8.14 -2.39 -0.02 -1.69 16 6 C -0.12 0.26 7.20 31.12 0.22 0.48 16 7 C 0.11 0.33 3.89 45.52 0.18 0.51 16 8 H 0.08 0.98 7.40 -2.39 -0.02 0.96 16 9 N -0.69 -0.69 5.35 -443.33 -2.37 -3.06 16 10 C 0.58 5.06 7.81 86.65 0.68 5.74 16 11 O -0.58 -10.13 14.45 -4.07 -0.06 -10.19 16 12 C -0.22 -1.13 6.31 -18.99 -0.12 -1.25 16 13 C 0.04 0.26 7.00 25.26 0.18 0.44 16 14 C 0.13 0.97 4.73 71.24 0.34 1.30 16 15 O -0.32 -3.65 10.12 -92.41 -0.94 -4.59 16 16 C 0.12 1.26 6.69 22.50 0.15 1.41 16 17 C -0.16 -1.43 9.99 22.37 0.22 -1.20 16 18 C -0.06 -0.41 9.60 22.25 0.21 -0.19 16 19 C -0.12 -0.78 5.42 -19.85 -0.11 -0.89 16 20 C -0.08 -0.17 2.81 71.23 0.20 0.03 16 21 O -0.56 -2.75 12.74 -148.98 -1.90 -4.65 16 22 Si 0.76 0.52 29.78 68.60 2.04 2.57 16 23 C -0.08 -0.46 8.66 22.26 0.19 -0.26 16 24 C -0.21 -1.48 9.04 22.37 0.20 -1.28 16 25 O -0.18 -0.55 10.52 4.44 0.05 -0.50 16 26 C -0.01 0.05 12.03 66.89 0.80 0.85 16 27 C -0.19 0.71 10.60 23.65 0.25 0.96 16 28 C -0.12 0.36 7.46 31.12 0.23 0.59 16 29 H 0.42 -4.36 8.83 -92.71 -0.82 -5.18 16 30 H 0.41 -1.36 8.93 -92.70 -0.83 -2.18 16 31 H 0.07 0.26 7.43 -2.39 -0.02 0.24 16 32 H 0.13 -1.28 8.12 -2.39 -0.02 -1.30 16 33 H 0.42 -2.87 7.90 -92.71 -0.73 -3.60 16 34 H 0.10 0.96 6.02 -2.39 -0.01 0.95 16 35 H 0.10 0.19 7.66 -2.39 -0.02 0.17 16 36 H 0.14 0.92 8.06 -2.91 -0.02 0.89 16 37 H 0.14 0.56 8.06 -2.91 -0.02 0.54 16 38 H 0.10 -0.25 7.96 -2.39 -0.02 -0.27 16 39 H 0.39 -1.41 8.74 -74.06 -0.65 -2.06 16 40 H -0.30 -2.74 7.11 99.48 0.71 -2.03 16 41 H -0.28 -1.13 7.11 99.48 0.71 -0.42 16 42 H 0.15 0.19 4.87 -2.91 -0.01 0.17 16 43 H 0.15 0.46 6.30 -2.91 -0.02 0.44 16 44 H 0.25 -3.51 8.06 -2.91 -0.02 -3.53 16 45 H 0.20 -2.26 7.74 -2.91 -0.02 -2.29 16 46 H 0.13 -1.05 8.14 -2.39 -0.02 -1.07 16 47 H 0.06 0.02 8.10 -2.38 -0.02 0.00 16 Total: 0.00 -36.76 400.07 -2.23 -39.00 By element: Atomic # 1 Polarization: -19.35 SS G_CDS: -1.90 Total: -21.25 kcal Atomic # 6 Polarization: 5.85 SS G_CDS: 4.43 Total: 10.28 kcal Atomic # 7 Polarization: 2.16 SS G_CDS: -3.91 Total: -1.75 kcal Atomic # 8 Polarization: -25.94 SS G_CDS: -2.90 Total: -28.84 kcal Atomic # 14 Polarization: 0.52 SS G_CDS: 2.04 Total: 2.57 kcal Total: -36.76 -2.23 -39.00 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_12220716_4549634.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -30.822 kcal (2) G-P(sol) polarization free energy of solvation -36.762 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -67.584 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.235 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.997 kcal (6) G-S(sol) free energy of system = (1) + (5) -69.819 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.45 seconds