Wall clock time and date at job start Thu Mar 4 2021 13:21:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.35986 * 117.00060 * 2 1 4 4 C 1.39160 * 120.07328 * 180.02562 * 3 2 1 5 5 O 1.35987 * 120.07171 * 359.97438 * 4 3 2 6 6 C 1.42905 * 117.00096 * 180.02562 * 5 4 3 7 7 C 1.50703 * 109.47264 * 179.97438 * 6 5 4 8 8 O 1.21279 * 119.99926 * 0.02562 * 7 6 5 9 9 N 1.34775 * 119.99773 * 179.97438 * 7 6 5 10 10 C 1.46496 * 119.99642 * 180.02562 * 9 7 6 11 11 H 1.08997 * 112.85238 * 336.19331 * 10 9 7 12 12 C 1.53782 * 113.61524 * 107.50449 * 10 9 7 13 13 C 1.53790 * 87.07966 * 89.11305 * 12 10 9 14 14 H 1.08994 * 113.61269 * 270.88275 * 13 12 10 15 15 C 1.50701 * 113.68648 * 139.99077 * 13 12 10 16 16 N 1.34773 * 119.99774 * 82.46868 * 15 13 12 17 17 O 1.21282 * 120.00474 * 262.46328 * 15 13 12 18 18 C 1.53783 * 87.07901 * 25.43623 * 13 12 10 19 19 C 1.38568 * 119.85419 * 180.27429 * 4 3 2 20 20 C 1.38244 * 119.99690 * 359.49543 * 19 4 3 21 21 N 1.48003 * 119.92559 * 180.25289 * 20 19 4 22 22 O 1.21803 * 120.00015 * 0.25354 * 21 20 19 23 23 O 1.21802 * 119.99950 * 180.25219 * 21 20 19 24 24 C 1.38258 * 120.14714 * 0.50287 * 20 19 4 25 25 C 1.50698 * 119.92413 * 179.72717 * 24 20 19 26 26 O 1.42892 * 109.47601 * 75.02482 * 25 24 20 27 27 Si 1.86299 * 109.46856 * 195.02444 * 25 24 20 28 28 C 1.38237 * 120.14727 * 359.75042 * 24 20 19 29 29 H 1.09000 * 109.46947 * 299.99609 * 1 2 3 30 30 H 1.08996 * 109.47227 * 60.00109 * 1 2 3 31 31 H 1.09004 * 109.47208 * 180.02562 * 1 2 3 32 32 H 1.09001 * 109.47103 * 300.00410 * 6 5 4 33 33 H 1.09004 * 109.47054 * 59.99914 * 6 5 4 34 34 H 0.96998 * 120.00166 * 0.02562 * 9 7 6 35 35 H 1.08996 * 113.61532 * 203.66298 * 12 10 9 36 36 H 1.08992 * 113.61370 * 334.56850 * 12 10 9 37 37 H 0.96998 * 120.00151 * 359.97438 * 16 15 13 38 38 H 0.97005 * 119.99873 * 179.97438 * 16 15 13 39 39 H 1.09006 * 113.61154 * 220.01741 * 18 13 12 40 40 H 1.08997 * 113.69263 * 89.12967 * 18 13 12 41 41 H 1.08001 * 120.00130 * 179.72086 * 19 4 3 42 42 H 1.09004 * 109.47111 * 315.02012 * 25 24 20 43 43 H 0.96699 * 114.00606 * 180.02562 * 26 25 24 44 44 H 1.48501 * 109.99988 * 178.67940 * 27 25 24 45 45 H 1.48496 * 110.00113 * 300.00100 * 27 25 24 46 46 H 1.08001 * 120.00223 * 179.97438 * 28 24 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2116 0.0000 4 6 3.4360 1.2862 -0.0005 5 8 4.1795 0.1476 -0.0005 6 6 5.6004 0.3006 -0.0005 7 6 6.2519 -1.0583 0.0001 8 8 5.5670 -2.0592 0.0000 9 7 7.5957 -1.1613 -0.0003 10 6 8.2290 -2.4823 -0.0003 11 1 7.5835 -3.2612 0.4055 12 6 8.8771 -2.8548 -1.3442 13 6 10.1580 -2.1817 -0.8234 14 1 10.2141 -1.1167 -1.0486 15 6 11.4202 -2.9230 -1.1820 16 7 11.9805 -2.7518 -2.3958 17 8 11.9319 -3.6735 -0.3784 18 6 9.6471 -2.4856 0.5948 19 6 4.0604 2.5233 0.0052 20 6 3.3030 3.6798 0.0009 21 7 3.9716 5.0002 0.0014 22 8 5.1878 5.0670 0.0009 23 8 3.3056 6.0200 0.0023 24 6 1.9224 3.6057 0.0014 25 6 1.1017 4.8696 0.0029 26 8 1.1337 5.4600 -1.2979 27 14 -0.6590 4.4660 0.4586 28 6 1.2932 2.3748 0.0009 29 1 -0.3633 0.5138 0.8900 30 1 -0.3633 0.5138 -0.8899 31 1 -0.3634 -1.0277 0.0005 32 1 5.9066 0.8504 -0.8905 33 1 5.9066 0.8504 0.8895 34 1 8.1435 -0.3608 -0.0006 35 1 8.9794 -3.9292 -1.4967 36 1 8.4329 -2.3454 -2.1992 37 1 11.5711 -2.1517 -3.0386 38 1 12.7931 -3.2286 -2.6265 39 1 9.8244 -1.6780 1.3052 40 1 9.9594 -3.4587 0.9738 41 1 5.1387 2.5839 0.0094 42 1 1.5138 5.5695 0.7299 43 1 0.6256 6.2795 -1.3706 44 1 -1.4718 5.7084 0.4947 45 1 -1.2324 3.5124 -0.5248 46 1 0.2146 2.3196 0.0017 There are 70 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 70 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_12220716_4549636.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:21:09 Heat of formation + Delta-G solvation = -110.168629 kcal Electronic energy + Delta-G solvation = -35158.762774 eV Core-core repulsion = 30021.078010 eV Total energy + Delta-G solvation = -5137.684764 eV No. of doubly occupied orbitals = 70 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 382.139 amu Computer time = 1.59 seconds Orbital eigenvalues (eV) -43.38447 -42.12691 -41.68994 -40.66602 -39.67546 -39.13800 -38.44572 -37.74009 -37.22802 -34.71590 -34.35846 -32.75552 -32.54320 -30.00785 -28.82540 -27.91566 -27.15003 -26.77135 -25.73997 -23.97802 -23.12571 -22.37589 -21.97646 -20.74503 -20.30754 -19.85186 -19.45296 -18.90536 -18.81862 -18.37553 -18.31603 -18.00658 -17.82359 -17.72614 -17.49658 -16.87656 -16.83959 -16.45939 -16.16593 -15.84321 -15.74392 -15.59733 -15.31293 -15.13936 -14.73813 -14.53759 -14.21943 -14.06629 -13.89701 -13.62030 -13.49826 -13.35511 -12.94725 -12.90402 -12.67005 -12.56884 -12.39497 -12.36270 -12.30776 -12.17186 -11.90828 -11.76972 -11.62957 -11.10661 -10.93576 -10.66536 -10.46871 -10.40526 -10.21314 -9.48166 -5.01071 -1.32056 -0.42395 0.19585 0.32013 1.14277 1.22446 1.37723 1.52121 1.59038 1.84200 1.87857 1.91356 2.31399 2.63427 2.91170 3.16094 3.31151 3.35375 3.42835 3.46642 3.51682 3.62037 3.72150 3.87949 3.91985 3.95323 4.00262 4.05609 4.13887 4.20046 4.27257 4.30554 4.38294 4.55302 4.61679 4.70551 4.71740 4.75095 4.76818 4.85480 4.92604 5.05376 5.28618 5.45294 5.59178 5.87755 6.04532 6.38921 6.46759 6.51442 6.53179 7.08249 7.34094 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.000 4.000 2 O -0.305 6.305 3 C 0.167 3.833 4 C 0.103 3.897 5 O -0.291 6.291 6 C 0.026 3.974 7 C 0.520 3.480 8 O -0.565 6.565 9 N -0.689 5.689 10 C 0.121 3.879 11 H 0.087 0.913 12 C -0.127 4.127 13 C -0.128 4.128 14 H 0.151 0.849 15 C 0.519 3.481 16 N -0.839 5.839 17 O -0.596 6.596 18 C -0.120 4.120 19 C -0.108 4.108 20 C -0.045 4.045 21 N 0.038 4.962 22 O -0.187 6.187 23 O -0.160 6.160 24 C 0.003 3.997 25 C -0.104 4.104 26 O -0.546 6.546 27 Si 0.767 3.233 28 C -0.173 4.173 29 H 0.089 0.911 30 H 0.070 0.930 31 H 0.124 0.876 32 H 0.131 0.869 33 H 0.132 0.868 34 H 0.424 0.576 35 H 0.086 0.914 36 H 0.095 0.905 37 H 0.418 0.582 38 H 0.404 0.596 39 H 0.096 0.904 40 H 0.089 0.911 41 H 0.189 0.811 42 H 0.102 0.898 43 H 0.400 0.600 44 H -0.278 1.278 45 H -0.269 1.269 46 H 0.182 0.818 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.460 2.477 -0.678 3.556 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.093 4.093 2 O -0.217 6.217 3 C 0.118 3.882 4 C 0.056 3.944 5 O -0.203 6.203 6 C -0.052 4.052 7 C 0.306 3.694 8 O -0.442 6.442 9 N -0.344 5.344 10 C 0.015 3.985 11 H 0.105 0.895 12 C -0.166 4.166 13 C -0.149 4.149 14 H 0.168 0.832 15 C 0.305 3.695 16 N -0.402 5.402 17 O -0.477 6.477 18 C -0.159 4.159 19 C -0.127 4.127 20 C -0.129 4.129 21 N 0.552 4.448 22 O -0.397 6.397 23 O -0.376 6.376 24 C 0.001 3.999 25 C -0.211 4.211 26 O -0.357 6.357 27 Si 0.668 3.332 28 C -0.192 4.192 29 H 0.107 0.893 30 H 0.088 0.912 31 H 0.143 0.857 32 H 0.149 0.851 33 H 0.150 0.850 34 H 0.262 0.738 35 H 0.104 0.896 36 H 0.113 0.887 37 H 0.249 0.751 38 H 0.234 0.766 39 H 0.115 0.885 40 H 0.107 0.893 41 H 0.206 0.794 42 H 0.120 0.880 43 H 0.251 0.749 44 H -0.204 1.204 45 H -0.196 1.196 46 H 0.199 0.801 Dipole moment (debyes) X Y Z Total from point charges -3.488 -0.180 -0.437 3.520 hybrid contribution 0.952 1.840 -1.353 2.475 sum -2.536 1.660 -1.790 3.520 Atomic orbital electron populations 1.23726 0.75093 1.06941 1.03557 1.86316 1.24436 1.24590 1.86369 1.18654 0.89372 0.86133 0.94014 1.17896 0.88525 0.85254 1.02699 1.86300 1.18600 1.26719 1.88725 1.22944 0.78677 0.95897 1.07632 1.20329 0.82921 0.90464 0.75664 1.90797 1.63915 1.39881 1.49619 1.45279 1.05080 1.09409 1.74585 1.21737 0.93861 0.85525 0.97394 0.89506 1.23295 0.93424 1.01633 0.98265 1.22920 0.90827 1.02413 0.98771 0.83171 1.20943 0.85832 0.81048 0.81688 1.43843 1.30719 1.49461 1.16165 1.90753 1.65356 1.40382 1.51210 1.23170 0.92490 1.04411 0.95812 1.20919 1.03125 0.87921 1.00775 1.20543 0.92520 0.82296 1.17536 1.43560 1.00831 1.03214 0.97205 1.94510 0.96307 1.94048 1.54818 1.94488 1.64631 1.25278 1.53167 1.19098 0.90429 0.95810 0.94565 1.25379 1.11796 0.94086 0.89873 1.86473 1.75766 1.44748 1.28683 0.94368 0.70697 0.80970 0.87124 1.21155 1.02079 0.88676 1.07307 0.89251 0.91187 0.85749 0.85108 0.85003 0.73776 0.89572 0.88684 0.75066 0.76556 0.88510 0.89272 0.79407 0.88047 0.74853 1.20426 1.19577 0.80143 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.00 0.00 9.81 113.37 1.11 1.11 16 2 O -0.31 -0.50 10.28 -79.53 -0.82 -1.31 16 3 C 0.17 0.13 6.70 22.57 0.15 0.28 16 4 C 0.10 0.08 6.70 22.57 0.15 0.23 16 5 O -0.29 -0.78 9.45 -66.99 -0.63 -1.41 16 6 C 0.03 -0.16 5.22 71.24 0.37 0.22 16 7 C 0.52 -0.22 7.91 87.66 0.69 0.48 16 8 O -0.56 -6.48 16.10 16.01 0.26 -6.22 16 9 N -0.69 5.01 5.26 -440.04 -2.32 2.70 16 10 C 0.12 -0.41 4.32 45.52 0.20 -0.22 16 11 H 0.09 0.21 7.46 -2.39 -0.02 0.20 16 12 C -0.13 0.70 7.43 31.12 0.23 0.93 16 13 C -0.13 0.89 4.02 -11.01 -0.04 0.84 16 14 H 0.15 -2.11 8.14 -2.39 -0.02 -2.13 16 15 C 0.52 -0.02 7.63 87.66 0.67 0.65 16 16 N -0.84 5.70 8.87 -173.53 -1.54 4.16 16 17 O -0.60 -6.56 16.74 -3.04 -0.05 -6.61 16 18 C -0.12 0.48 7.15 31.12 0.22 0.70 16 19 C -0.11 0.11 8.54 22.35 0.19 0.30 16 20 C -0.04 -0.15 6.85 36.38 0.25 0.10 16 21 N 0.04 0.30 4.45 -46.46 -0.21 0.09 16 22 O -0.19 -1.62 18.44 18.88 0.35 -1.27 16 23 O -0.16 -1.51 14.62 25.10 0.37 -1.14 16 24 C 0.00 0.00 5.29 -19.86 -0.11 -0.10 16 25 C -0.10 0.06 1.73 71.24 0.12 0.18 16 26 O -0.55 -1.32 11.77 -129.63 -1.53 -2.84 16 27 Si 0.77 -4.25 30.19 68.60 2.07 -2.18 16 28 C -0.17 0.34 7.65 22.35 0.17 0.51 16 29 H 0.09 -1.03 7.66 -2.39 -0.02 -1.05 16 30 H 0.07 -0.59 7.67 -2.39 -0.02 -0.60 16 31 H 0.12 -1.15 8.14 -2.38 -0.02 -1.17 16 32 H 0.13 -1.62 7.68 -2.39 -0.02 -1.64 16 33 H 0.13 -1.63 7.65 -2.38 -0.02 -1.65 16 34 H 0.42 -6.41 8.70 -92.71 -0.81 -7.22 16 35 H 0.09 -0.22 8.10 -2.39 -0.02 -0.24 16 36 H 0.09 -0.73 8.14 -2.39 -0.02 -0.75 16 37 H 0.42 -5.60 8.83 -92.71 -0.82 -6.42 16 38 H 0.40 -2.65 8.93 -92.70 -0.83 -3.48 16 39 H 0.10 -0.67 8.14 -2.38 -0.02 -0.69 16 40 H 0.09 0.13 7.44 -2.39 -0.02 0.11 16 41 H 0.19 -1.26 5.85 -2.91 -0.02 -1.28 16 42 H 0.10 -0.06 6.07 -2.38 -0.01 -0.08 16 43 H 0.40 -2.01 8.74 -74.06 -0.65 -2.66 16 44 H -0.28 0.23 7.11 99.48 0.71 0.93 16 45 H -0.27 0.70 6.74 99.48 0.67 1.37 16 46 H 0.18 -1.19 3.13 -2.91 -0.01 -1.20 16 Total: 0.00 -37.85 393.46 -1.63 -39.48 By element: Atomic # 1 Polarization: -27.68 SS G_CDS: -1.97 Total: -29.65 kcal Atomic # 6 Polarization: 1.83 SS G_CDS: 4.38 Total: 6.22 kcal Atomic # 7 Polarization: 11.01 SS G_CDS: -4.06 Total: 6.95 kcal Atomic # 8 Polarization: -18.76 SS G_CDS: -2.05 Total: -20.82 kcal Atomic # 14 Polarization: -4.25 SS G_CDS: 2.07 Total: -2.18 kcal Total: -37.85 -1.63 -39.48 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_12220716_4549636.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -70.690 kcal (2) G-P(sol) polarization free energy of solvation -37.848 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -108.538 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.631 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.479 kcal (6) G-S(sol) free energy of system = (1) + (5) -110.169 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.59 seconds