Wall clock time and date at job start Thu Mar 4 2021 13:21:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34784 * 1 3 3 O 1.21280 * 119.99532 * 2 1 4 4 C 1.50694 * 119.99926 * 180.02562 * 2 1 3 5 5 H 1.09000 * 112.85132 * 48.80542 * 4 2 1 6 6 C 1.53781 * 113.61167 * 180.02562 * 4 2 1 7 7 C 1.53779 * 87.08504 * 89.19955 * 6 4 2 8 8 H 1.09006 * 113.61312 * 270.80488 * 7 6 4 9 9 N 1.46491 * 113.61737 * 139.98184 * 7 6 4 10 10 C 1.34779 * 120.00452 * 155.00306 * 9 7 6 11 11 O 1.21289 * 119.99591 * 359.97438 * 10 9 7 12 12 C 1.50697 * 120.00282 * 180.02562 * 10 9 7 13 13 O 1.42903 * 109.47103 * 179.97438 * 12 10 9 14 14 C 1.35899 * 117.00351 * 180.02562 * 13 12 10 15 15 C 1.38711 * 120.05047 * 359.97438 * 14 13 12 16 16 C 1.38165 * 119.94450 * 180.02562 * 15 14 13 17 17 C 1.38244 * 120.05319 * 359.97438 * 16 15 14 18 18 C 1.50700 * 119.94709 * 179.97438 * 17 16 15 19 19 O 1.42896 * 109.47736 * 119.99811 * 18 17 16 20 20 Si 1.86301 * 109.46869 * 359.97438 * 18 17 16 21 21 C 1.38288 * 120.11305 * 0.02562 * 17 16 15 22 22 C 1.38123 * 120.05386 * 359.97438 * 21 17 16 23 23 N 1.48007 * 120.02730 * 180.02562 * 22 21 17 24 24 O 1.21803 * 119.99877 * 359.97438 * 23 22 21 25 25 O 1.21799 * 120.00116 * 179.97438 * 23 22 21 26 26 C 1.53785 * 113.68906 * 277.53490 * 4 2 1 27 27 H 0.97005 * 119.99499 * 179.97438 * 1 2 3 28 28 H 0.97002 * 119.99967 * 0.02562 * 1 2 3 29 29 H 1.08996 * 113.61388 * 334.65023 * 6 4 2 30 30 H 1.09000 * 113.68989 * 203.75743 * 6 4 2 31 31 H 0.97006 * 120.00040 * 334.99869 * 9 7 6 32 32 H 1.08993 * 109.47316 * 60.00068 * 12 10 9 33 33 H 1.08995 * 109.46897 * 299.99667 * 12 10 9 34 34 H 1.08000 * 120.03164 * 0.02562 * 15 14 13 35 35 H 1.08002 * 119.97562 * 179.72226 * 16 15 14 36 36 H 1.09004 * 109.47095 * 240.00763 * 18 17 16 37 37 H 0.96700 * 114.00167 * 300.00630 * 19 18 17 38 38 H 1.48503 * 109.99995 * 58.68612 * 20 18 17 39 39 H 1.48508 * 110.00274 * 180.02562 * 20 18 17 40 40 H 1.08001 * 119.97583 * 180.02562 * 21 17 16 41 41 H 1.09001 * 113.61448 * 156.32960 * 26 4 2 42 42 H 1.08996 * 113.61650 * 25.42675 * 26 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3478 0.0000 0.0000 3 8 1.9542 1.0504 0.0000 4 6 2.1013 -1.3051 -0.0006 5 1 1.7400 -2.0021 -0.7567 6 6 3.6296 -1.1340 0.0001 7 6 3.5489 -1.1224 1.5357 8 1 3.4009 -0.1283 1.9577 9 7 4.6342 -1.8607 2.1861 10 6 5.0030 -1.5478 3.4441 11 8 4.4365 -0.6545 4.0376 12 6 6.1199 -2.3069 4.1128 13 8 6.3224 -1.7934 5.4309 14 6 7.3014 -2.3721 6.1749 15 6 8.0512 -3.4131 5.6474 16 6 9.0456 -4.0002 6.4059 17 6 9.2939 -3.5506 7.6894 18 6 10.3787 -4.1932 8.5149 19 8 11.3549 -3.2106 8.8667 20 14 11.1895 -5.5491 7.5275 21 6 8.5478 -2.5130 8.2176 22 6 7.5526 -1.9227 7.4633 23 7 6.7548 -0.8118 8.0290 24 8 6.9755 -0.4181 9.1603 25 8 5.8776 -0.2914 7.3633 26 6 2.2503 -1.9331 1.3952 27 1 -0.4850 -0.8401 -0.0004 28 1 -0.4850 0.8401 -0.0004 29 1 3.9632 -0.1882 -0.4267 30 1 4.1666 -1.9929 -0.4024 31 1 5.0875 -2.5749 1.7113 32 1 7.0358 -2.1911 3.5335 33 1 5.8575 -3.3633 4.1704 34 1 7.8578 -3.7644 4.6446 35 1 9.6267 -4.8138 5.9974 36 1 9.9441 -4.6145 9.4214 37 1 11.7837 -2.7928 8.1074 38 1 11.7582 -4.9935 6.2732 39 1 12.2610 -6.1912 8.3307 40 1 8.7440 -2.1632 9.2204 41 1 2.4089 -3.0113 1.3742 42 1 1.4704 -1.6326 2.0948 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_22_12220716_4549638.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:21:14 Heat of formation + Delta-G solvation = -75.124933 kcal Electronic energy + Delta-G solvation = -30508.866049 eV Core-core repulsion = 25846.920705 eV Total energy + Delta-G solvation = -4661.945344 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 352.124 amu Computer time = 0.93 seconds Orbital eigenvalues (eV) -43.01462 -41.93353 -41.57770 -40.50936 -39.51513 -38.29766 -37.61221 -37.11169 -34.81570 -34.50323 -33.50065 -32.39996 -30.24299 -27.59842 -27.12413 -26.93043 -26.53145 -24.18605 -22.99249 -22.73912 -21.84324 -20.50247 -20.42216 -19.44310 -19.25491 -18.57110 -18.33935 -18.33324 -18.14630 -18.13853 -17.66563 -17.24850 -17.09187 -16.55075 -16.36776 -16.01507 -15.86550 -15.65747 -15.50009 -15.17348 -14.96706 -14.39365 -14.14120 -14.04367 -13.84858 -13.68211 -13.42865 -13.30673 -13.16064 -12.57362 -12.54971 -12.18928 -12.02133 -11.95435 -11.84441 -11.77810 -11.72351 -11.01367 -10.97611 -10.90601 -10.89388 -10.71711 -10.22228 -9.91883 -5.23062 -1.12987 -0.38575 0.38427 0.53803 0.99739 1.08770 1.32429 1.39550 1.54865 1.74917 1.92755 2.20572 2.40398 2.96626 3.01600 3.14962 3.21667 3.23427 3.26321 3.40785 3.51872 3.55234 3.56664 3.67304 3.69298 3.70527 4.11107 4.13989 4.17272 4.33197 4.37167 4.40018 4.42753 4.60075 4.67039 4.68609 4.85880 4.92228 4.96636 5.31370 5.45081 5.71046 5.74237 6.15253 6.24889 6.27283 6.94470 7.03197 7.22473 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.852 5.852 2 C 0.532 3.468 3 O -0.535 6.535 4 C -0.140 4.140 5 H 0.112 0.888 6 C -0.126 4.126 7 C 0.125 3.875 8 H 0.124 0.876 9 N -0.717 5.717 10 C 0.513 3.487 11 O -0.493 6.493 12 C 0.031 3.969 13 O -0.253 6.253 14 C 0.200 3.800 15 C -0.210 4.210 16 C -0.024 4.024 17 C -0.156 4.156 18 C -0.072 4.072 19 O -0.525 6.525 20 Si 0.688 3.312 21 C 0.009 3.991 22 C -0.076 4.076 23 N 0.028 4.972 24 O -0.177 6.177 25 O -0.118 6.118 26 C -0.136 4.136 27 H 0.403 0.597 28 H 0.405 0.595 29 H 0.093 0.907 30 H 0.096 0.904 31 H 0.402 0.598 32 H 0.102 0.898 33 H 0.103 0.897 34 H 0.157 0.843 35 H 0.149 0.851 36 H 0.126 0.874 37 H 0.378 0.622 38 H -0.256 1.256 39 H -0.251 1.251 40 H 0.164 0.836 41 H 0.099 0.901 42 H 0.079 0.921 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.019 -12.211 -7.843 14.513 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.415 5.415 2 C 0.316 3.684 3 O -0.411 6.411 4 C -0.162 4.162 5 H 0.130 0.870 6 C -0.165 4.165 7 C 0.021 3.979 8 H 0.142 0.858 9 N -0.371 5.371 10 C 0.296 3.704 11 O -0.365 6.365 12 C -0.048 4.048 13 O -0.163 6.163 14 C 0.150 3.850 15 C -0.229 4.229 16 C -0.042 4.042 17 C -0.158 4.158 18 C -0.182 4.182 19 O -0.331 6.331 20 Si 0.588 3.412 21 C -0.010 4.010 22 C -0.160 4.160 23 N 0.548 4.452 24 O -0.385 6.385 25 O -0.341 6.341 26 C -0.175 4.175 27 H 0.231 0.769 28 H 0.236 0.764 29 H 0.111 0.889 30 H 0.115 0.885 31 H 0.237 0.763 32 H 0.120 0.880 33 H 0.121 0.879 34 H 0.174 0.826 35 H 0.166 0.834 36 H 0.144 0.856 37 H 0.226 0.774 38 H -0.181 1.181 39 H -0.175 1.175 40 H 0.182 0.818 41 H 0.117 0.883 42 H 0.098 0.902 Dipole moment (debyes) X Y Z Total from point charges 0.968 -11.779 -7.298 13.890 hybrid contribution 0.026 0.696 -0.422 0.814 sum 0.994 -11.083 -7.720 13.543 Atomic orbital electron populations 1.43823 1.07100 1.12806 1.77814 1.20059 0.82716 0.90583 0.75044 1.90793 1.68168 1.33310 1.48826 1.22223 0.97377 0.95889 1.00675 0.87030 1.23246 0.93611 1.04436 0.95173 1.22681 0.85480 0.97296 0.92439 0.85842 1.45770 1.38044 1.38804 1.14498 1.19880 0.83991 0.84307 0.82173 1.90880 1.53361 1.29212 1.63022 1.22746 0.99782 0.99293 0.82964 1.86510 1.48676 1.55692 1.25378 1.18699 0.87294 0.90407 0.88559 1.21267 0.99852 0.98928 1.02831 1.21259 0.94170 0.96407 0.92357 1.20253 1.00785 0.99020 0.95713 1.25071 0.89788 0.97749 1.05564 1.86657 1.55015 1.55217 1.36240 0.95193 0.85650 0.82065 0.78337 1.20843 0.88399 0.91430 1.00285 1.20590 1.02962 0.98326 0.94120 1.43345 1.00399 1.00777 1.00661 1.94557 1.73826 1.66237 1.03927 1.94704 1.23273 1.56874 1.59294 1.23435 0.98760 1.00809 0.94514 0.76890 0.76427 0.88856 0.88534 0.76329 0.88037 0.87938 0.82584 0.83357 0.85630 0.77407 1.18111 1.17508 0.81805 0.88273 0.90201 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.85 2.28 8.87 31.22 0.28 2.56 16 2 C 0.53 0.23 7.36 -10.98 -0.08 0.14 16 3 O -0.54 -2.82 16.59 5.56 0.09 -2.73 16 4 C -0.14 0.39 4.34 -90.96 -0.39 0.00 16 5 H 0.11 -0.57 8.14 -51.93 -0.42 -1.00 16 6 C -0.13 0.31 7.20 -25.92 -0.19 0.12 16 7 C 0.13 -0.11 3.89 -67.15 -0.26 -0.37 16 8 H 0.12 0.39 7.40 -51.93 -0.38 0.00 16 9 N -0.72 1.91 5.35 -53.05 -0.28 1.63 16 10 C 0.51 0.35 7.91 -10.99 -0.09 0.26 16 11 O -0.49 -3.30 16.10 -14.36 -0.23 -3.53 16 12 C 0.03 -0.08 5.22 36.00 0.19 0.11 16 13 O -0.25 -0.55 7.68 -49.77 -0.38 -0.94 16 14 C 0.20 0.12 6.67 -39.22 -0.26 -0.14 16 15 C -0.21 0.74 9.04 -39.43 -0.36 0.38 16 16 C -0.02 0.10 8.66 -39.61 -0.34 -0.25 16 17 C -0.16 0.35 5.39 -104.60 -0.56 -0.22 16 18 C -0.07 0.19 2.82 36.01 0.10 0.29 16 19 O -0.52 0.34 12.77 -35.23 -0.45 -0.11 16 20 Si 0.69 -2.62 29.78 -169.99 -5.06 -7.69 16 21 C 0.01 0.00 9.12 -39.61 -0.36 -0.36 16 22 C -0.08 -0.21 6.87 -79.81 -0.55 -0.76 16 23 N 0.03 0.19 4.45 34.03 0.15 0.34 16 24 O -0.18 -1.31 18.45 -29.46 -0.54 -1.85 16 25 O -0.12 -1.04 17.24 -36.49 -0.63 -1.67 16 26 C -0.14 0.40 7.46 -25.94 -0.19 0.20 16 27 H 0.40 -2.29 8.83 -40.82 -0.36 -2.65 16 28 H 0.40 -1.12 8.93 -40.82 -0.36 -1.49 16 29 H 0.09 -0.01 7.43 -51.93 -0.39 -0.39 16 30 H 0.10 -0.50 8.12 -51.93 -0.42 -0.92 16 31 H 0.40 -2.67 8.73 -40.82 -0.36 -3.02 16 32 H 0.10 -0.59 7.66 -51.93 -0.40 -0.99 16 33 H 0.10 -0.65 7.66 -51.93 -0.40 -1.04 16 34 H 0.16 -1.12 6.30 -52.49 -0.33 -1.45 16 35 H 0.15 -1.00 4.87 -52.49 -0.26 -1.25 16 36 H 0.13 -0.42 7.96 -51.93 -0.41 -0.83 16 37 H 0.38 -1.35 8.70 45.56 0.40 -0.95 16 38 H -0.26 0.59 7.11 56.52 0.40 0.99 16 39 H -0.25 -0.02 7.11 56.52 0.40 0.39 16 40 H 0.16 0.09 7.61 -52.49 -0.40 -0.31 16 41 H 0.10 -0.48 8.14 -51.93 -0.42 -0.91 16 42 H 0.08 -0.14 8.10 -51.93 -0.42 -0.56 16 LS Contribution 368.04 15.07 5.55 5.55 Total: 0.00 -16.02 368.04 -9.40 -25.42 By element: Atomic # 1 Polarization: -11.87 SS G_CDS: -4.53 Total: -16.40 kcal Atomic # 6 Polarization: 2.77 SS G_CDS: -3.35 Total: -0.58 kcal Atomic # 7 Polarization: 4.38 SS G_CDS: 0.14 Total: 4.52 kcal Atomic # 8 Polarization: -8.68 SS G_CDS: -2.14 Total: -10.82 kcal Atomic # 14 Polarization: -2.62 SS G_CDS: -5.06 Total: -7.69 kcal Total LS contribution 5.55 Total: 5.55 kcal Total: -16.02 -9.40 -25.42 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_12220716_4549638.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -49.705 kcal (2) G-P(sol) polarization free energy of solvation -16.022 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -65.726 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.399 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.420 kcal (6) G-S(sol) free energy of system = (1) + (5) -75.125 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.93 seconds