Wall clock time and date at job start Thu Mar 4 2021 13:21:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34775 * 1 3 3 O 1.21281 * 120.00073 * 2 1 4 4 C 1.50701 * 119.99783 * 179.97438 * 2 1 3 5 5 H 1.09002 * 112.85178 * 309.66413 * 4 2 1 6 6 C 1.53785 * 113.69000 * 80.93572 * 4 2 1 7 7 C 1.53777 * 87.08241 * 89.12299 * 6 4 2 8 8 H 1.08998 * 113.69520 * 270.87557 * 7 6 4 9 9 N 1.46499 * 113.61486 * 139.97730 * 7 6 4 10 10 C 1.34774 * 119.99884 * 107.49951 * 9 7 6 11 11 O 1.21286 * 120.00054 * 0.02562 * 10 9 7 12 12 C 1.50705 * 120.00141 * 180.02562 * 10 9 7 13 13 F 1.39900 * 109.47057 * 300.00469 * 12 10 9 14 14 F 1.39902 * 109.46669 * 60.00550 * 12 10 9 15 15 O 1.42904 * 109.46994 * 180.02562 * 12 10 9 16 16 C 1.35897 * 116.99348 * 180.02562 * 15 12 10 17 17 C 1.38725 * 120.06015 * 359.72753 * 16 15 12 18 18 C 1.38147 * 119.94319 * 179.70004 * 17 16 15 19 19 C 1.38266 * 120.05497 * 0.59264 * 18 17 16 20 20 C 1.50701 * 119.94442 * 179.70332 * 19 18 17 21 21 O 1.42895 * 109.47412 * 119.98164 * 20 19 18 22 22 Si 1.86302 * 109.47134 * 359.97438 * 20 19 18 23 23 C 1.38272 * 120.11365 * 359.68137 * 19 18 17 24 24 C 1.38142 * 120.04950 * 0.02562 * 23 19 18 25 25 C 1.53781 * 113.61206 * 178.47107 * 4 2 1 26 26 H 0.97003 * 120.00033 * 180.02562 * 1 2 3 27 27 H 0.97009 * 119.99964 * 359.97438 * 1 2 3 28 28 H 1.08999 * 113.61060 * 203.67722 * 6 4 2 29 29 H 1.08997 * 113.61198 * 334.57515 * 6 4 2 30 30 H 0.97004 * 120.00097 * 287.50765 * 9 7 6 31 31 H 1.07999 * 120.02830 * 359.97438 * 17 16 15 32 32 H 1.08000 * 119.97291 * 180.31778 * 18 17 16 33 33 H 1.09001 * 109.46788 * 239.97848 * 20 19 18 34 34 H 0.96697 * 114.00575 * 180.02562 * 21 20 19 35 35 H 1.48494 * 109.99836 * 60.00364 * 22 20 19 36 36 H 1.48502 * 109.99878 * 181.32213 * 22 20 19 37 37 H 1.07995 * 119.97198 * 180.02562 * 23 19 18 38 38 H 1.08005 * 120.02565 * 180.02562 * 24 23 19 39 39 H 1.09000 * 113.61578 * 25.34539 * 25 4 2 40 40 H 1.09001 * 113.61682 * 156.17118 * 25 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3477 0.0000 0.0000 3 8 1.9542 1.0503 0.0000 4 6 2.1012 -1.3051 0.0006 5 1 1.7576 -1.9919 0.7741 6 6 2.2180 -1.9518 -1.3898 7 6 3.5133 -1.1429 -1.5706 8 1 3.3558 -0.1545 -2.0021 9 7 4.5837 -1.8900 -2.2357 10 6 4.9236 -1.5937 -3.5058 11 8 4.3437 -0.7083 -4.0979 12 6 6.0243 -2.3626 -4.1902 13 9 7.2168 -2.2055 -3.4756 14 9 5.6850 -3.7190 -4.2388 15 8 6.1968 -1.8663 -5.5191 16 6 7.1573 -2.4564 -6.2781 17 6 7.9219 -3.4879 -5.7528 18 6 8.8935 -4.0902 -6.5285 19 6 9.1124 -3.6576 -7.8233 20 6 10.1775 -4.3120 -8.6651 21 8 9.5801 -4.8795 -9.8326 22 14 11.0110 -5.6547 -7.6786 23 6 8.3556 -2.6259 -8.3474 24 6 7.3788 -2.0244 -7.5777 25 6 3.6290 -1.1344 -0.0371 26 1 -0.4850 -0.8401 0.0004 27 1 -0.4850 0.8401 0.0004 28 1 2.3770 -3.0297 -1.3580 29 1 1.4220 -1.6604 -2.0751 30 1 5.0477 -2.5980 -1.7620 31 1 7.7547 -3.8227 -4.7397 32 1 9.4855 -4.8967 -6.1217 33 1 10.9159 -3.5666 -8.9606 34 1 10.2084 -5.3189 -10.4219 35 1 10.0148 -6.6772 -7.2696 36 1 12.0849 -6.2865 -8.4866 37 1 8.5283 -2.2901 -9.3592 38 1 6.7875 -1.2189 -7.9876 39 1 3.9722 -0.1831 0.3695 40 1 4.1739 -1.9882 0.3657 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_12220716_4549640.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:21:16 Heat of formation + Delta-G solvation = -179.877944 kcal Electronic energy + Delta-G solvation = -29764.580708 eV Core-core repulsion = 24990.201417 eV Total energy + Delta-G solvation = -4774.379291 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 343.111 amu Computer time = 0.94 seconds Orbital eigenvalues (eV) -50.90538 -48.87147 -41.91867 -41.37279 -40.71937 -39.27083 -38.47134 -37.43808 -35.06194 -34.56289 -32.52461 -32.10836 -29.44532 -27.07689 -26.79128 -26.08509 -24.52427 -23.14780 -22.56796 -22.32267 -20.75699 -20.46626 -19.70941 -19.63956 -18.55907 -18.34431 -18.09678 -17.98927 -17.32598 -17.09691 -16.77282 -16.44851 -16.42572 -15.92214 -15.69090 -15.58068 -15.56528 -15.45176 -15.35819 -15.12134 -14.91972 -14.46235 -14.39599 -14.33864 -14.03095 -13.71691 -13.68401 -13.38557 -13.18212 -13.13589 -12.57357 -12.13161 -11.97172 -11.87770 -11.78716 -11.54195 -11.00829 -10.68539 -10.53494 -10.50366 -10.19477 -9.57742 -4.93408 0.00495 0.14639 0.44863 0.59663 1.28528 1.54618 1.59324 1.65625 1.94260 1.98754 2.41865 2.54186 2.76482 3.19763 3.30830 3.32162 3.36347 3.54622 3.62629 3.65763 3.83213 3.85210 4.07749 4.18453 4.21635 4.33488 4.42874 4.51531 4.65818 4.71467 4.73308 4.81413 4.85105 4.89798 4.99913 5.02830 5.25489 5.33725 5.37501 5.79947 5.84435 5.85788 6.44067 6.46077 6.58929 7.31772 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.837 5.837 2 C 0.521 3.479 3 O -0.594 6.594 4 C -0.129 4.129 5 H 0.152 0.848 6 C -0.122 4.122 7 C 0.105 3.895 8 H 0.089 0.911 9 N -0.671 5.671 10 C 0.515 3.485 11 O -0.513 6.513 12 C 0.436 3.564 13 F -0.168 7.168 14 F -0.169 7.169 15 O -0.306 6.306 16 C 0.084 3.916 17 C -0.192 4.192 18 C -0.079 4.079 19 C -0.104 4.104 20 C -0.082 4.082 21 O -0.558 6.558 22 Si 0.759 3.241 23 C -0.059 4.059 24 C -0.137 4.137 25 C -0.118 4.118 26 H 0.420 0.580 27 H 0.405 0.595 28 H 0.132 0.868 29 H 0.075 0.925 30 H 0.427 0.573 31 H 0.145 0.855 32 H 0.154 0.846 33 H 0.101 0.899 34 H 0.396 0.604 35 H -0.298 1.298 36 H -0.283 1.283 37 H 0.151 0.849 38 H 0.145 0.855 39 H 0.072 0.928 40 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.088 -5.950 4.987 7.764 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.400 5.400 2 C 0.307 3.693 3 O -0.474 6.474 4 C -0.151 4.151 5 H 0.170 0.830 6 C -0.161 4.161 7 C 0.001 3.999 8 H 0.108 0.892 9 N -0.324 5.324 10 C 0.293 3.707 11 O -0.386 6.386 12 C 0.358 3.642 13 F -0.150 7.150 14 F -0.151 7.151 15 O -0.223 6.223 16 C 0.042 3.958 17 C -0.210 4.210 18 C -0.096 4.096 19 C -0.105 4.105 20 C -0.190 4.190 21 O -0.368 6.368 22 Si 0.664 3.336 23 C -0.077 4.077 24 C -0.156 4.156 25 C -0.156 4.156 26 H 0.251 0.749 27 H 0.236 0.764 28 H 0.150 0.850 29 H 0.094 0.906 30 H 0.267 0.733 31 H 0.163 0.837 32 H 0.171 0.829 33 H 0.119 0.881 34 H 0.247 0.753 35 H -0.225 1.225 36 H -0.210 1.210 37 H 0.168 0.832 38 H 0.163 0.837 39 H 0.091 0.909 40 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges -0.253 -5.227 4.862 7.143 hybrid contribution -0.307 -0.506 -1.072 1.224 sum -0.560 -5.733 3.790 6.896 Atomic orbital electron populations 1.43768 1.06383 1.13876 1.75958 1.20685 0.83522 0.90989 0.74140 1.90770 1.69410 1.35471 1.51755 1.22213 0.96423 0.94764 1.01665 0.83021 1.23461 0.96239 1.02113 0.94244 1.23002 0.87021 0.96146 0.93703 0.89245 1.45756 1.37578 1.38240 1.10845 1.19534 0.83103 0.84009 0.84060 1.90862 1.52331 1.30653 1.64802 1.21732 0.82854 0.78065 0.81557 1.93199 1.48496 1.95085 1.78205 1.93197 1.92094 1.33771 1.96018 1.86649 1.54438 1.58521 1.22718 1.19228 0.89788 0.94712 0.92096 1.21589 0.99083 0.98128 1.02212 1.20981 0.96452 0.98879 0.93300 1.19572 0.99051 0.97461 0.94376 1.24951 0.97600 1.05084 0.91405 1.86538 1.39685 1.76079 1.34496 0.94224 0.77300 0.77162 0.84933 1.21060 0.92767 0.94001 0.99897 1.20706 1.00957 1.02936 0.90966 1.23320 0.94842 1.05132 0.92334 0.74894 0.76368 0.85024 0.90636 0.73341 0.83724 0.82920 0.88080 0.75307 1.22537 1.21012 0.83169 0.83697 0.90940 0.84709 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.84 5.33 8.87 -173.53 -1.54 3.79 16 2 C 0.52 0.22 7.35 87.66 0.64 0.86 16 3 O -0.59 -6.89 16.67 -3.03 -0.05 -6.94 16 4 C -0.13 0.95 4.34 -11.01 -0.05 0.90 16 5 H 0.15 -2.16 8.14 -2.39 -0.02 -2.18 16 6 C -0.12 0.89 7.46 31.12 0.23 1.12 16 7 C 0.10 -0.12 3.91 45.52 0.18 0.06 16 8 H 0.09 0.66 7.46 -2.39 -0.02 0.64 16 9 N -0.67 1.43 5.35 -440.02 -2.36 -0.92 16 10 C 0.51 3.08 7.34 87.66 0.64 3.73 16 11 O -0.51 -7.48 16.10 15.99 0.26 -7.22 16 12 C 0.44 2.26 2.05 71.24 0.15 2.41 16 13 F -0.17 -0.50 15.28 44.97 0.69 0.19 16 14 F -0.17 -0.48 15.31 44.97 0.69 0.21 16 15 O -0.31 -3.13 9.60 -73.36 -0.70 -3.84 16 16 C 0.08 0.68 6.48 22.51 0.15 0.83 16 17 C -0.19 -0.93 8.26 22.36 0.18 -0.74 16 18 C -0.08 -0.19 8.66 22.25 0.19 0.00 16 19 C -0.10 -0.31 5.42 -19.85 -0.11 -0.42 16 20 C -0.08 0.08 2.81 71.24 0.20 0.28 16 21 O -0.56 -0.91 12.74 -148.98 -1.90 -2.81 16 22 Si 0.76 -1.84 29.78 68.60 2.04 0.20 16 23 C -0.06 -0.22 9.60 22.25 0.21 -0.01 16 24 C -0.14 -0.84 9.99 22.37 0.22 -0.61 16 25 C -0.12 0.65 7.21 31.12 0.22 0.88 16 26 H 0.42 -5.57 8.83 -92.71 -0.82 -6.39 16 27 H 0.41 -2.46 8.93 -92.70 -0.83 -3.29 16 28 H 0.13 -1.65 8.14 -2.39 -0.02 -1.67 16 29 H 0.07 -0.39 8.10 -2.39 -0.02 -0.41 16 30 H 0.43 -3.95 8.73 -92.71 -0.81 -4.75 16 31 H 0.15 0.32 5.10 -2.91 -0.01 0.31 16 32 H 0.15 -0.37 4.87 -2.91 -0.01 -0.38 16 33 H 0.10 -0.55 7.96 -2.39 -0.02 -0.57 16 34 H 0.40 -2.56 8.74 -74.06 -0.65 -3.21 16 35 H -0.30 -1.46 7.11 99.48 0.71 -0.75 16 36 H -0.28 -0.42 7.11 99.48 0.71 0.29 16 37 H 0.15 0.08 8.06 -2.91 -0.02 0.06 16 38 H 0.15 0.59 8.06 -2.91 -0.02 0.57 16 39 H 0.07 0.03 7.41 -2.39 -0.02 0.02 16 40 H 0.13 -1.69 8.12 -2.39 -0.02 -1.71 16 Total: 0.00 -29.79 351.47 -1.70 -31.48 By element: Atomic # 1 Polarization: -21.53 SS G_CDS: -1.90 Total: -23.43 kcal Atomic # 6 Polarization: 6.21 SS G_CDS: 3.07 Total: 9.28 kcal Atomic # 7 Polarization: 6.77 SS G_CDS: -3.90 Total: 2.87 kcal Atomic # 8 Polarization: -18.41 SS G_CDS: -2.40 Total: -20.80 kcal Atomic # 9 Polarization: -0.98 SS G_CDS: 1.38 Total: 0.39 kcal Atomic # 14 Polarization: -1.84 SS G_CDS: 2.04 Total: 0.20 kcal Total: -29.79 -1.70 -31.48 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_12220716_4549640.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -148.394 kcal (2) G-P(sol) polarization free energy of solvation -29.787 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -178.181 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.697 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.484 kcal (6) G-S(sol) free energy of system = (1) + (5) -179.878 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.94 seconds