Wall clock time and date at job start Thu Mar 4 2021 13:21:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34777 * 1 3 3 O 1.21280 * 119.99826 * 2 1 4 4 C 1.50695 * 119.99867 * 179.97438 * 2 1 3 5 5 H 1.09006 * 112.85163 * 48.80273 * 4 2 1 6 6 C 1.53778 * 113.61437 * 179.97438 * 4 2 1 7 7 C 1.53779 * 87.08119 * 89.20083 * 6 4 2 8 8 H 1.08995 * 113.61843 * 270.80183 * 7 6 4 9 9 N 1.46503 * 113.61599 * 139.98136 * 7 6 4 10 10 C 1.34773 * 120.00139 * 155.00017 * 9 7 6 11 11 O 1.21546 * 119.99932 * 0.02562 * 10 9 7 12 12 C 1.47842 * 119.99953 * 179.97438 * 10 9 7 13 13 C 1.39556 * 120.14524 * 180.02562 * 12 10 9 14 14 C 1.50697 * 120.07264 * 359.97438 * 13 12 10 15 15 O 1.42903 * 109.47262 * 179.97438 * 14 13 12 16 16 C 1.35898 * 116.99943 * 179.97438 * 15 14 13 17 17 C 1.38716 * 120.05518 * 179.97438 * 16 15 14 18 18 C 1.38163 * 119.94349 * 180.02562 * 17 16 15 19 19 C 1.50706 * 119.96833 * 179.97438 * 18 17 16 20 20 O 1.42895 * 109.47147 * 65.00211 * 19 18 17 21 21 Si 1.86299 * 109.46748 * 184.99853 * 19 18 17 22 22 C 1.38238 * 120.05749 * 0.25624 * 18 17 16 23 23 C 1.38287 * 120.11238 * 359.49033 * 22 18 17 24 24 C 1.38127 * 120.05446 * 0.51012 * 23 22 18 25 25 C 1.37976 * 119.85431 * 180.25249 * 13 12 10 26 26 C 1.38337 * 120.14561 * 359.45364 * 25 13 12 27 27 C 1.38382 * 120.28964 * 0.54643 * 26 25 13 28 28 C 1.37931 * 120.14584 * 359.73259 * 27 26 25 29 29 C 1.53779 * 113.69208 * 277.53750 * 4 2 1 30 30 H 0.97002 * 120.00413 * 179.97438 * 1 2 3 31 31 H 0.97006 * 120.00246 * 0.02562 * 1 2 3 32 32 H 1.09001 * 113.61661 * 334.64941 * 6 4 2 33 33 H 1.08999 * 113.61232 * 203.74933 * 6 4 2 34 34 H 0.97000 * 119.99606 * 334.99811 * 9 7 6 35 35 H 1.09006 * 109.47109 * 60.00339 * 14 13 12 36 36 H 1.08999 * 109.47479 * 299.99766 * 14 13 12 37 37 H 1.08002 * 120.02697 * 0.04676 * 17 16 15 38 38 H 1.09000 * 109.47318 * 304.99324 * 19 18 17 39 39 H 0.96700 * 113.99916 * 179.97438 * 20 19 18 40 40 H 1.48502 * 110.00097 * 300.00038 * 21 19 18 41 41 H 1.48504 * 110.00088 * 61.32125 * 21 19 18 42 42 H 1.08001 * 119.94354 * 179.72345 * 22 18 17 43 43 H 1.08003 * 119.97758 * 180.23758 * 23 22 18 44 44 H 1.07996 * 120.02910 * 179.76729 * 24 23 22 45 45 H 1.08003 * 119.92766 * 179.72738 * 25 13 12 46 46 H 1.07997 * 119.85711 * 180.30049 * 26 25 13 47 47 H 1.08001 * 119.92720 * 179.70461 * 27 26 25 48 48 H 1.08007 * 120.07713 * 180.02562 * 28 27 26 49 49 H 1.09003 * 113.61584 * 156.32532 * 29 4 2 50 50 H 1.08996 * 113.61469 * 25.42005 * 29 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3478 0.0000 0.0000 3 8 1.9541 1.0503 0.0000 4 6 2.1012 -1.3051 0.0006 5 1 1.7399 -2.0028 -0.7549 6 6 3.6295 -1.1341 -0.0001 7 6 3.5499 -1.1205 1.5355 8 1 3.4023 -0.1259 1.9564 9 7 4.6357 -1.8581 2.1861 10 6 5.0054 -1.5435 3.4433 11 8 4.4376 -0.6481 4.0377 12 6 6.1008 -2.2882 4.1000 13 6 6.4857 -1.9653 5.4020 14 6 5.7859 -0.8553 6.1430 15 8 6.3560 -0.7193 7.4463 16 6 5.8353 0.2451 8.2499 17 6 6.3407 0.4319 9.5281 18 6 5.8092 1.4127 10.3433 19 6 6.3575 1.6157 11.7323 20 8 7.7131 2.0599 11.6491 21 14 5.3378 2.8967 12.6212 22 6 4.7711 2.2039 9.8881 23 6 4.2690 2.0232 8.6123 24 6 4.7968 1.0441 7.7934 25 6 7.5123 -2.6608 6.0071 26 6 8.1520 -3.6838 5.3303 27 6 7.7752 -4.0090 4.0391 28 6 6.7544 -3.3178 3.4206 29 6 2.2502 -1.9319 1.3969 30 1 -0.4851 -0.8400 -0.0004 31 1 -0.4851 0.8401 -0.0004 32 1 3.9629 -0.1889 -0.4285 33 1 4.1648 -1.9943 -0.4020 34 1 5.0885 -2.5729 1.7119 35 1 4.7255 -1.0910 6.2335 36 1 5.9050 0.0791 5.5947 37 1 7.1492 -0.1885 9.8856 38 1 6.3165 0.6744 12.2804 39 1 8.1307 2.2117 12.5080 40 1 5.3854 4.1849 11.8840 41 1 3.9324 2.4325 12.7424 42 1 4.3541 2.9670 10.5285 43 1 3.4605 2.6451 8.2575 44 1 4.4018 0.9008 6.7985 45 1 7.8141 -2.4090 7.0131 46 1 8.9517 -4.2283 5.8103 47 1 8.2818 -4.8055 3.5144 48 1 6.4609 -3.5728 2.4129 49 1 2.4087 -3.0102 1.3768 50 1 1.4703 -1.6307 2.0962 There are 70 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 70 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_12220716_4557126.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:21:19 Heat of formation + Delta-G solvation = -58.305989 kcal Electronic energy + Delta-G solvation = -34241.404467 eV Core-core repulsion = 29587.225082 eV Total energy + Delta-G solvation = -4654.179384 eV No. of doubly occupied orbitals = 70 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 383.161 amu Computer time = 1.57 seconds Orbital eigenvalues (eV) -42.02574 -41.54862 -40.97957 -39.63227 -38.96492 -38.31983 -37.35378 -34.98728 -34.59292 -33.37592 -32.75578 -32.12366 -31.18119 -28.15012 -27.17935 -26.77539 -26.57762 -24.85177 -23.87364 -23.37976 -22.64320 -21.81767 -21.67932 -20.38484 -19.01856 -18.95628 -18.42567 -18.24339 -18.07386 -17.61929 -17.57395 -17.28007 -17.23371 -16.61001 -16.28137 -16.21310 -16.02804 -15.72932 -15.59480 -15.44153 -15.36846 -14.73292 -14.72240 -14.58516 -14.38696 -14.26582 -14.13129 -13.67948 -13.61363 -13.45830 -13.33033 -13.26830 -13.09650 -12.74495 -12.49270 -12.30319 -12.24931 -12.22798 -11.89917 -11.87625 -11.69274 -11.05671 -10.94302 -10.72779 -10.41873 -10.31229 -10.06758 -9.99663 -9.85417 -9.46035 -4.96038 -0.29411 0.00425 0.16425 0.24575 1.25989 1.50975 1.64018 1.71337 1.87373 1.97739 2.00283 2.44136 2.51352 2.70535 3.33030 3.34576 3.39619 3.46852 3.55246 3.65272 3.70559 3.76276 3.78307 3.82773 3.86798 4.01474 4.05847 4.10281 4.15683 4.24189 4.24679 4.33084 4.37566 4.40820 4.51028 4.55848 4.65869 4.70238 4.77261 4.78271 4.82362 4.89709 4.96443 5.03255 5.04905 5.13319 5.19273 5.22336 5.30919 5.41399 5.43932 5.52216 5.81018 5.81264 6.17084 6.39372 6.40638 6.89388 7.05325 7.28005 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.837 5.837 2 C 0.521 3.479 3 O -0.595 6.595 4 C -0.130 4.130 5 H 0.149 0.851 6 C -0.120 4.120 7 C 0.110 3.890 8 H 0.077 0.923 9 N -0.695 5.695 10 C 0.552 3.448 11 O -0.577 6.577 12 C -0.148 4.148 13 C -0.054 4.054 14 C 0.116 3.884 15 O -0.321 6.321 16 C 0.124 3.876 17 C -0.134 4.134 18 C -0.050 4.050 19 C -0.083 4.083 20 O -0.563 6.563 21 Si 0.787 3.213 22 C -0.178 4.178 23 C -0.077 4.077 24 C -0.211 4.211 25 C -0.123 4.123 26 C -0.088 4.088 27 C -0.121 4.121 28 C -0.074 4.074 29 C -0.121 4.121 30 H 0.419 0.581 31 H 0.405 0.595 32 H 0.065 0.935 33 H 0.132 0.868 34 H 0.418 0.582 35 H 0.076 0.924 36 H 0.071 0.929 37 H 0.142 0.858 38 H 0.098 0.902 39 H 0.405 0.595 40 H -0.297 1.297 41 H -0.288 1.288 42 H 0.124 0.876 43 H 0.147 0.853 44 H 0.135 0.865 45 H 0.133 0.867 46 H 0.154 0.846 47 H 0.165 0.835 48 H 0.164 0.836 49 H 0.128 0.872 50 H 0.066 0.934 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.595 -9.828 -1.630 9.980 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.400 5.400 2 C 0.307 3.693 3 O -0.475 6.475 4 C -0.152 4.152 5 H 0.167 0.833 6 C -0.158 4.158 7 C 0.005 3.995 8 H 0.095 0.905 9 N -0.347 5.347 10 C 0.341 3.659 11 O -0.458 6.458 12 C -0.151 4.151 13 C -0.055 4.055 14 C 0.042 3.958 15 O -0.235 6.235 16 C 0.078 3.922 17 C -0.152 4.152 18 C -0.050 4.050 19 C -0.192 4.192 20 O -0.373 6.373 21 Si 0.692 3.308 22 C -0.196 4.196 23 C -0.094 4.094 24 C -0.230 4.230 25 C -0.141 4.141 26 C -0.106 4.106 27 C -0.139 4.139 28 C -0.093 4.093 29 C -0.160 4.160 30 H 0.251 0.749 31 H 0.236 0.764 32 H 0.083 0.917 33 H 0.150 0.850 34 H 0.258 0.742 35 H 0.094 0.906 36 H 0.089 0.911 37 H 0.160 0.840 38 H 0.116 0.884 39 H 0.256 0.744 40 H -0.225 1.225 41 H -0.215 1.215 42 H 0.141 0.859 43 H 0.164 0.836 44 H 0.152 0.848 45 H 0.151 0.849 46 H 0.172 0.828 47 H 0.183 0.817 48 H 0.182 0.818 49 H 0.147 0.853 50 H 0.085 0.915 Dipole moment (debyes) X Y Z Total from point charges -1.109 -8.313 -1.884 8.595 hybrid contribution -0.695 0.068 -0.808 1.068 sum -1.804 -8.245 -2.692 8.859 Atomic orbital electron populations 1.43762 1.06367 1.13830 1.76046 1.20714 0.83507 0.91043 0.74048 1.90763 1.69452 1.35548 1.51781 1.22221 0.96593 0.94716 1.01637 0.83343 1.23284 0.94514 1.04508 0.93514 1.22625 0.87376 0.95961 0.93525 0.90509 1.45712 1.36958 1.38074 1.13982 1.18620 0.82548 0.82446 0.82240 1.90746 1.56976 1.33043 1.65044 1.19661 0.99852 1.01030 0.94600 1.19674 0.96603 0.95937 0.93318 1.21521 0.96631 0.97737 0.79935 1.85933 1.59343 1.51769 1.26422 1.19151 0.93060 0.88911 0.91042 1.20383 1.02387 1.01034 0.91410 1.19537 0.95102 0.94562 0.95848 1.24932 0.90314 1.08180 0.95773 1.86453 1.24399 1.89545 1.36953 0.94448 0.76411 0.74616 0.85294 1.20996 0.99896 1.01340 0.97336 1.21132 0.99008 0.96462 0.92848 1.21506 0.99798 0.99588 1.02104 1.21124 0.95448 0.96318 1.01180 1.21786 0.98632 0.95128 0.95034 1.21603 0.96855 1.00426 0.94970 1.21610 0.94564 0.92565 1.00524 1.23420 0.96621 1.02012 0.93940 0.74909 0.76416 0.91659 0.84966 0.74218 0.90562 0.91088 0.83996 0.88414 0.74359 1.22506 1.21514 0.85875 0.83552 0.84765 0.84921 0.82846 0.81732 0.81829 0.85344 0.91471 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.84 3.87 8.87 -173.54 -1.54 2.33 16 2 C 0.52 1.32 7.36 87.66 0.65 1.96 16 3 O -0.59 -8.25 16.59 -3.03 -0.05 -8.30 16 4 C -0.13 0.67 4.34 -11.02 -0.05 0.63 16 5 H 0.15 -1.82 8.14 -2.38 -0.02 -1.84 16 6 C -0.12 0.39 7.20 31.12 0.22 0.62 16 7 C 0.11 0.13 3.90 45.54 0.18 0.31 16 8 H 0.08 0.84 7.40 -2.39 -0.02 0.83 16 9 N -0.70 0.74 5.31 -442.82 -2.35 -1.61 16 10 C 0.55 3.59 7.75 86.79 0.67 4.26 16 11 O -0.58 -8.42 13.01 -3.86 -0.05 -8.47 16 12 C -0.15 -0.57 5.87 -20.09 -0.12 -0.69 16 13 C -0.05 -0.40 5.91 -19.61 -0.12 -0.52 16 14 C 0.12 1.30 3.38 71.24 0.24 1.54 16 15 O -0.32 -3.90 8.62 -92.40 -0.80 -4.69 16 16 C 0.12 1.59 6.69 22.51 0.15 1.74 16 17 C -0.13 -1.49 9.62 22.37 0.22 -1.28 16 18 C -0.05 -0.50 5.38 -19.88 -0.11 -0.60 16 19 C -0.08 -0.23 2.79 71.24 0.20 -0.03 16 20 O -0.56 -1.57 12.81 -148.98 -1.91 -3.47 16 21 Si 0.79 0.25 29.84 68.60 2.05 2.30 16 22 C -0.18 -1.88 8.67 22.28 0.19 -1.69 16 23 C -0.08 -0.79 10.04 22.26 0.22 -0.57 16 24 C -0.21 -2.58 9.04 22.37 0.20 -2.38 16 25 C -0.12 -0.53 9.37 22.23 0.21 -0.32 16 26 C -0.09 0.14 10.04 22.33 0.22 0.37 16 27 C -0.12 0.59 10.03 22.23 0.22 0.81 16 28 C -0.07 0.28 9.54 22.53 0.21 0.50 16 29 C -0.12 0.60 7.47 31.14 0.23 0.83 16 30 H 0.42 -4.89 8.83 -92.71 -0.82 -5.71 16 31 H 0.40 -1.81 8.93 -92.70 -0.83 -2.63 16 32 H 0.06 0.21 7.43 -2.39 -0.02 0.19 16 33 H 0.13 -1.41 8.12 -2.39 -0.02 -1.43 16 34 H 0.42 -3.74 6.76 -92.71 -0.63 -4.36 16 35 H 0.08 0.97 6.86 -2.38 -0.02 0.96 16 36 H 0.07 0.99 6.86 -2.39 -0.02 0.98 16 37 H 0.14 1.24 8.06 -2.91 -0.02 1.21 16 38 H 0.10 -0.17 7.96 -2.39 -0.02 -0.19 16 39 H 0.40 -3.49 8.74 -74.06 -0.65 -4.14 16 40 H -0.30 -2.37 7.05 99.48 0.70 -1.66 16 41 H -0.29 -1.62 7.11 99.48 0.71 -0.92 16 42 H 0.12 1.07 4.86 -2.91 -0.01 1.06 16 43 H 0.15 0.84 8.06 -2.91 -0.02 0.81 16 44 H 0.13 1.61 6.30 -2.91 -0.02 1.60 16 45 H 0.13 0.66 7.00 -2.91 -0.02 0.64 16 46 H 0.15 -0.99 8.06 -2.91 -0.02 -1.01 16 47 H 0.17 -1.83 8.06 -2.91 -0.02 -1.86 16 48 H 0.16 -1.91 6.41 -2.91 -0.02 -1.93 16 49 H 0.13 -1.34 8.14 -2.39 -0.02 -1.36 16 50 H 0.07 -0.14 8.10 -2.39 -0.02 -0.16 16 Total: 0.00 -34.74 412.68 -2.63 -37.38 By element: Atomic # 1 Polarization: -19.10 SS G_CDS: -1.84 Total: -20.94 kcal Atomic # 6 Polarization: 1.62 SS G_CDS: 3.86 Total: 5.48 kcal Atomic # 7 Polarization: 4.61 SS G_CDS: -3.89 Total: 0.72 kcal Atomic # 8 Polarization: -22.14 SS G_CDS: -2.81 Total: -24.94 kcal Atomic # 14 Polarization: 0.25 SS G_CDS: 2.05 Total: 2.30 kcal Total: -34.74 -2.63 -37.38 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_12220716_4557126.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -20.930 kcal (2) G-P(sol) polarization free energy of solvation -34.744 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -55.674 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.632 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.376 kcal (6) G-S(sol) free energy of system = (1) + (5) -58.306 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.57 seconds