Wall clock time and date at job start Thu Mar 4 2021 13:21:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34777 * 1 3 3 O 1.21276 * 120.00256 * 2 1 4 4 C 1.50703 * 119.99629 * 179.97438 * 2 1 3 5 5 H 1.09004 * 112.91097 * 48.75107 * 4 2 1 6 6 C 1.53784 * 113.61272 * 180.02562 * 4 2 1 7 7 C 1.53787 * 87.07923 * 89.11465 * 6 4 2 8 8 H 1.08998 * 113.61447 * 270.79825 * 7 6 4 9 9 N 1.46501 * 113.61128 * 139.98386 * 7 6 4 10 10 C 1.34772 * 120.00042 * 154.99929 * 9 7 6 11 11 O 1.21280 * 120.00022 * 0.02562 * 10 9 7 12 12 C 1.50700 * 120.00036 * 179.97438 * 10 9 7 13 13 O 1.42902 * 109.47246 * 180.02562 * 12 10 9 14 14 C 1.35900 * 117.00301 * 180.02562 * 13 12 10 15 15 C 1.38706 * 120.05916 * 179.72551 * 14 13 12 16 16 C 1.38165 * 119.94499 * 179.76656 * 15 14 13 17 17 C 1.50704 * 119.97293 * 180.23692 * 16 15 14 18 18 O 1.42896 * 109.47401 * 65.24899 * 17 16 15 19 19 Si 1.86294 * 109.47157 * 185.25422 * 17 16 15 20 20 C 1.38242 * 120.05320 * 0.48389 * 16 15 14 21 21 C 1.38287 * 120.11437 * 359.77109 * 20 16 15 22 22 C 1.38122 * 120.05282 * 359.97438 * 21 20 16 23 23 C 1.53779 * 113.61433 * 277.49565 * 4 2 1 24 24 H 0.97000 * 120.00164 * 180.02562 * 1 2 3 25 25 H 0.97004 * 119.99923 * 0.02562 * 1 2 3 26 26 H 1.09004 * 113.61451 * 334.56951 * 6 4 2 27 27 H 1.08994 * 113.61477 * 203.66253 * 6 4 2 28 28 H 0.97005 * 120.00129 * 334.99728 * 9 7 6 29 29 H 1.08999 * 109.47487 * 300.00623 * 12 10 9 30 30 H 1.09002 * 109.46807 * 60.00250 * 12 10 9 31 31 H 1.08004 * 120.02762 * 0.02562 * 15 14 13 32 32 H 1.09001 * 109.46518 * 305.25033 * 17 16 15 33 33 H 0.96697 * 114.00098 * 180.02562 * 18 17 16 34 34 H 1.48504 * 109.99769 * 299.99664 * 19 17 16 35 35 H 1.48500 * 110.00256 * 61.31217 * 19 17 16 36 36 H 1.08002 * 119.94265 * 179.74544 * 20 16 15 37 37 H 1.07996 * 119.97165 * 179.97438 * 21 20 16 38 38 H 1.08004 * 120.02752 * 179.97438 * 22 21 20 39 39 H 1.09006 * 113.61307 * 156.34016 * 23 4 2 40 40 H 1.09007 * 113.61642 * 25.43773 * 23 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3478 0.0000 0.0000 3 8 1.9542 1.0503 0.0000 4 6 2.1012 -1.3052 0.0006 5 1 1.7400 -2.0040 -0.7540 6 6 3.6295 -1.1342 0.0011 7 6 3.5484 -1.1190 1.5368 8 1 3.4006 -0.1239 1.9564 9 7 4.6337 -1.8559 2.1890 10 6 5.0022 -1.5400 3.4463 11 8 4.4351 -0.6460 4.0379 12 6 6.1182 -2.2984 4.1175 13 8 6.3199 -1.7824 5.4347 14 6 7.2980 -2.3602 6.1806 15 6 7.5518 -1.9052 7.4661 16 6 8.5435 -2.4975 8.2241 17 6 8.8162 -2.0071 9.6229 18 8 7.6798 -2.2678 10.4491 19 14 10.3023 -2.8936 10.3130 20 6 9.2893 -3.5361 7.6987 21 6 9.0418 -3.9882 6.4155 22 6 8.0480 -3.4028 5.6556 23 6 2.2500 -1.9299 1.3978 24 1 -0.4850 -0.8400 0.0004 25 1 -0.4850 0.8401 -0.0004 26 1 3.9633 -0.1893 -0.4278 27 1 4.1653 -1.9948 -0.3993 28 1 5.0870 -2.5712 1.7160 29 1 5.8550 -3.3544 4.1776 30 1 7.0344 -2.1848 3.5381 31 1 6.9719 -1.0913 7.8757 32 1 9.0108 -0.9348 9.6004 33 1 7.7848 -1.9774 11.3654 34 1 10.0497 -4.3565 10.3488 35 1 11.4978 -2.6049 9.4807 36 1 10.0669 -3.9951 8.2914 37 1 9.6261 -4.7995 6.0072 38 1 7.8553 -3.7559 4.6532 39 1 2.4085 -3.0082 1.3794 40 1 1.4699 -1.6277 2.0967 There are 56 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 56 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_12220716_4860298.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:21:23 Heat of formation + Delta-G solvation = -89.750753 kcal Electronic energy + Delta-G solvation = -24125.769388 eV Core-core repulsion = 20294.206256 eV Total energy + Delta-G solvation = -3831.563132 eV No. of doubly occupied orbitals = 56 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 307.130 amu Computer time = 0.80 seconds Orbital eigenvalues (eV) -41.90234 -41.44979 -40.44842 -39.05946 -38.29261 -37.30745 -34.87419 -34.50301 -32.70419 -31.81929 -29.63164 -27.05622 -26.77029 -26.51982 -23.83151 -23.20651 -22.40649 -21.64196 -20.34935 -19.25637 -18.51384 -18.42245 -18.09643 -18.03937 -17.59817 -17.51101 -17.17049 -16.89468 -15.96627 -15.89605 -15.81200 -15.50557 -15.35163 -14.87943 -14.63778 -14.38922 -14.34324 -13.85673 -13.78840 -13.53713 -13.35182 -13.24599 -13.07902 -12.45463 -12.28284 -12.16830 -11.89911 -11.85934 -11.70415 -11.09728 -10.99699 -10.71983 -10.39994 -10.21264 -10.02005 -9.43680 -4.93042 0.06105 0.21816 1.24886 1.34754 1.43824 1.52180 1.65716 1.95762 2.48902 2.51916 2.53478 3.34485 3.37971 3.39941 3.47776 3.68496 3.72650 3.79496 3.85235 3.86849 3.95070 4.02621 4.14430 4.17824 4.24982 4.37938 4.51017 4.55626 4.67172 4.77264 4.83161 4.83847 4.97031 5.04409 5.07160 5.18098 5.28684 5.41674 5.52794 5.82239 6.16618 6.40837 6.41827 6.86962 7.07952 7.28952 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.837 5.837 2 C 0.520 3.480 3 O -0.596 6.596 4 C -0.131 4.131 5 H 0.150 0.850 6 C -0.117 4.117 7 C 0.109 3.891 8 H 0.072 0.928 9 N -0.694 5.694 10 C 0.510 3.490 11 O -0.578 6.578 12 C 0.037 3.963 13 O -0.320 6.320 14 C 0.120 3.880 15 C -0.147 4.147 16 C -0.052 4.052 17 C -0.092 4.092 18 O -0.565 6.565 19 Si 0.789 3.211 20 C -0.180 4.180 21 C -0.071 4.071 22 C -0.200 4.200 23 C -0.122 4.122 24 H 0.420 0.580 25 H 0.405 0.595 26 H 0.064 0.936 27 H 0.136 0.864 28 H 0.425 0.575 29 H 0.130 0.870 30 H 0.128 0.872 31 H 0.122 0.878 32 H 0.088 0.912 33 H 0.404 0.596 34 H -0.291 1.291 35 H -0.285 1.285 36 H 0.123 0.877 37 H 0.161 0.839 38 H 0.169 0.831 39 H 0.132 0.868 40 H 0.065 0.935 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.764 -8.421 -3.143 9.021 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.400 5.400 2 C 0.306 3.694 3 O -0.476 6.476 4 C -0.152 4.152 5 H 0.168 0.832 6 C -0.156 4.156 7 C 0.004 3.996 8 H 0.090 0.910 9 N -0.348 5.348 10 C 0.297 3.703 11 O -0.456 6.456 12 C -0.041 4.041 13 O -0.234 6.234 14 C 0.075 3.925 15 C -0.166 4.166 16 C -0.052 4.052 17 C -0.201 4.201 18 O -0.375 6.375 19 Si 0.694 3.306 20 C -0.198 4.198 21 C -0.089 4.089 22 C -0.219 4.219 23 C -0.161 4.161 24 H 0.251 0.749 25 H 0.236 0.764 26 H 0.083 0.917 27 H 0.154 0.846 28 H 0.265 0.735 29 H 0.148 0.852 30 H 0.145 0.855 31 H 0.140 0.860 32 H 0.106 0.894 33 H 0.255 0.745 34 H -0.218 1.218 35 H -0.212 1.212 36 H 0.140 0.860 37 H 0.178 0.822 38 H 0.186 0.814 39 H 0.150 0.850 40 H 0.083 0.917 Dipole moment (debyes) X Y Z Total from point charges 1.141 -7.888 -3.372 8.654 hybrid contribution -0.794 0.343 -0.633 1.072 sum 0.347 -7.545 -4.005 8.549 Atomic orbital electron populations 1.43763 1.06376 1.13844 1.76023 1.20750 0.83533 0.91103 0.74048 1.90762 1.69458 1.35598 1.51805 1.22234 0.96684 0.94678 1.01630 0.83205 1.23286 0.94450 1.04623 0.93212 1.22597 0.87535 0.95900 0.93609 0.90980 1.45617 1.37189 1.38398 1.13598 1.20660 0.83892 0.83231 0.82560 1.90773 1.56522 1.33016 1.65295 1.22789 0.99083 0.99703 0.82485 1.86135 1.51791 1.58617 1.26835 1.19182 0.88835 0.93258 0.91226 1.20354 1.00383 1.03275 0.92562 1.19489 0.95263 0.95398 0.95069 1.25071 0.99539 1.05715 0.89732 1.86450 1.39246 1.85595 1.26259 0.94196 0.72395 0.76639 0.87396 1.21056 1.02016 0.98661 0.98078 1.21264 0.96118 0.98822 0.92655 1.21630 0.98972 0.98204 1.03063 1.23419 0.96558 1.02171 0.93925 0.74890 0.76415 0.91674 0.84646 0.73547 0.85217 0.85484 0.85997 0.89396 0.74510 1.21825 1.21224 0.85959 0.82181 0.81355 0.85005 0.91661 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.84 3.74 8.87 -173.53 -1.54 2.20 16 2 C 0.52 1.39 7.36 87.66 0.64 2.03 16 3 O -0.60 -8.41 16.58 -3.02 -0.05 -8.46 16 4 C -0.13 0.71 4.35 -11.01 -0.05 0.66 16 5 H 0.15 -1.90 8.14 -2.39 -0.02 -1.92 16 6 C -0.12 0.46 7.20 31.12 0.22 0.69 16 7 C 0.11 0.10 3.89 45.50 0.18 0.28 16 8 H 0.07 0.85 7.39 -2.39 -0.02 0.83 16 9 N -0.69 2.09 5.35 -440.14 -2.36 -0.27 16 10 C 0.51 2.69 7.91 87.66 0.69 3.38 16 11 O -0.58 -10.68 16.10 16.01 0.26 -10.43 16 12 C 0.04 -0.04 5.22 71.24 0.37 0.33 16 13 O -0.32 -3.04 9.67 -73.39 -0.71 -3.75 16 14 C 0.12 0.92 6.69 22.51 0.15 1.08 16 15 C -0.15 -1.54 9.63 22.36 0.22 -1.32 16 16 C -0.05 -0.42 5.38 -19.88 -0.11 -0.52 16 17 C -0.09 -0.25 2.79 71.24 0.20 -0.05 16 18 O -0.57 -1.90 12.81 -148.98 -1.91 -3.81 16 19 Si 0.79 -0.83 29.85 68.60 2.05 1.21 16 20 C -0.18 -1.06 8.67 22.28 0.19 -0.86 16 21 C -0.07 -0.11 10.04 22.25 0.22 0.11 16 22 C -0.20 -0.20 9.04 22.37 0.20 0.00 16 23 C -0.12 0.63 7.45 31.10 0.23 0.87 16 24 H 0.42 -4.87 8.83 -92.71 -0.82 -5.69 16 25 H 0.41 -1.73 8.93 -92.71 -0.83 -2.56 16 26 H 0.06 0.17 7.43 -2.39 -0.02 0.15 16 27 H 0.14 -1.60 8.12 -2.39 -0.02 -1.62 16 28 H 0.43 -5.32 8.73 -92.70 -0.81 -6.13 16 29 H 0.13 -1.09 7.66 -2.39 -0.02 -1.11 16 30 H 0.13 -0.99 7.66 -2.39 -0.02 -1.01 16 31 H 0.12 1.46 8.06 -2.91 -0.02 1.44 16 32 H 0.09 -0.03 7.96 -2.39 -0.02 -0.05 16 33 H 0.40 -3.14 8.74 -74.06 -0.65 -3.78 16 34 H -0.29 -1.58 7.05 99.48 0.70 -0.88 16 35 H -0.29 -1.08 7.11 99.48 0.71 -0.37 16 36 H 0.12 0.55 4.86 -2.91 -0.01 0.53 16 37 H 0.16 -0.78 8.06 -2.91 -0.02 -0.80 16 38 H 0.17 -1.25 6.30 -2.91 -0.02 -1.27 16 39 H 0.13 -1.49 8.14 -2.38 -0.02 -1.51 16 40 H 0.06 -0.12 8.09 -2.38 -0.02 -0.14 16 Total: 0.00 -39.69 342.11 -2.83 -42.52 By element: Atomic # 1 Polarization: -23.94 SS G_CDS: -1.94 Total: -25.88 kcal Atomic # 6 Polarization: 3.29 SS G_CDS: 3.37 Total: 6.66 kcal Atomic # 7 Polarization: 5.83 SS G_CDS: -3.90 Total: 1.93 kcal Atomic # 8 Polarization: -24.04 SS G_CDS: -2.41 Total: -26.45 kcal Atomic # 14 Polarization: -0.83 SS G_CDS: 2.05 Total: 1.21 kcal Total: -39.69 -2.83 -42.52 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_12220716_4860298.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -47.227 kcal (2) G-P(sol) polarization free energy of solvation -39.693 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -86.920 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.831 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -42.524 kcal (6) G-S(sol) free energy of system = (1) + (5) -89.751 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.80 seconds