Wall clock time and date at job start Thu Mar 4 2021 13:21:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.35979 * 116.99735 * 2 1 4 4 C 1.38681 * 120.00092 * 180.02562 * 3 2 1 5 5 C 1.38159 * 120.00143 * 179.74404 * 4 3 2 6 6 C 1.50695 * 120.00049 * 180.25228 * 5 4 3 7 7 O 1.42900 * 109.47068 * 105.25570 * 6 5 4 8 8 Si 1.86297 * 109.47171 * 345.25678 * 6 5 4 9 9 C 1.38682 * 119.99763 * 0.50674 * 5 4 3 10 10 O 1.35975 * 119.99605 * 179.74211 * 9 5 4 11 11 C 1.42904 * 116.99517 * 179.72697 * 10 9 5 12 12 C 1.50705 * 109.46994 * 180.02562 * 11 10 9 13 13 O 1.21286 * 119.99804 * 359.97438 * 12 11 10 14 14 N 1.34774 * 120.00141 * 180.02562 * 12 11 10 15 15 C 1.46499 * 119.99884 * 180.02562 * 14 12 11 16 16 H 1.08994 * 112.90841 * 336.24152 * 15 14 12 17 17 C 1.53777 * 113.61486 * 107.49951 * 15 14 12 18 18 C 1.53785 * 87.08241 * 139.97730 * 17 15 14 19 19 H 1.09002 * 113.61570 * 220.01842 * 18 17 15 20 20 C 1.50701 * 113.69000 * 89.12299 * 18 17 15 21 21 N 1.34775 * 119.99783 * 80.93572 * 20 18 17 22 22 O 1.21281 * 120.00144 * 260.93299 * 20 18 17 23 23 C 1.53781 * 87.08241 * 334.56547 * 18 17 15 24 24 C 1.38722 * 119.99772 * 359.46973 * 9 5 4 25 25 C 1.38109 * 120.00366 * 0.27574 * 24 9 5 26 26 H 1.09002 * 109.47532 * 60.00406 * 1 2 3 27 27 H 1.09006 * 109.46927 * 180.02562 * 1 2 3 28 28 H 1.08995 * 109.47280 * 299.99803 * 1 2 3 29 29 H 1.08001 * 120.00032 * 0.02562 * 4 3 2 30 30 H 1.09004 * 109.47291 * 225.25797 * 6 5 4 31 31 H 0.96692 * 114.00096 * 300.00113 * 7 6 5 32 32 H 1.48499 * 110.00155 * 180.02562 * 8 6 5 33 33 H 1.48505 * 109.99862 * 301.31939 * 8 6 5 34 34 H 1.08995 * 109.47274 * 60.00567 * 11 10 9 35 35 H 1.09001 * 109.47371 * 300.00024 * 11 10 9 36 36 H 0.97004 * 120.00019 * 359.97438 * 14 12 11 37 37 H 1.08999 * 113.61947 * 25.43156 * 17 15 14 38 38 H 1.08997 * 113.61348 * 254.52371 * 17 15 14 39 39 H 0.97003 * 120.00033 * 0.02562 * 21 20 18 40 40 H 0.97009 * 119.99964 * 179.97438 * 21 20 18 41 41 H 1.09000 * 113.61578 * 139.97748 * 23 18 17 42 42 H 1.09001 * 113.61682 * 270.80327 * 23 18 17 43 43 H 1.07997 * 119.99450 * 180.25204 * 24 9 5 44 44 H 1.07994 * 119.99968 * 179.97438 * 25 24 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0463 1.2116 0.0000 4 6 3.4312 1.2843 -0.0005 5 6 4.0584 2.5153 -0.0059 6 6 5.5632 2.5942 -0.0122 7 8 6.0150 2.9702 -1.3147 8 14 6.2742 0.9315 0.4356 9 6 3.3030 3.6783 -0.0001 10 8 3.9203 4.8899 0.0000 11 6 3.0803 6.0459 0.0000 12 6 3.9345 7.2875 -0.0006 13 8 5.1435 7.1918 -0.0006 14 7 3.3548 8.5043 -0.0001 15 6 4.1852 9.7112 -0.0012 16 1 5.1832 9.5399 0.4021 17 6 4.1838 10.4586 -1.3452 18 6 4.1362 11.7621 -0.5306 19 1 3.4789 12.5199 -0.9571 20 6 5.4967 12.3022 -0.1722 21 7 6.1989 13.0136 -1.0764 22 8 5.9598 12.0968 0.9297 23 6 3.4828 10.9427 0.5948 24 6 1.9177 3.6056 0.0000 25 6 1.2907 2.3750 0.0000 26 1 -0.3634 0.5138 -0.8900 27 1 -0.3633 -1.0277 0.0005 28 1 -0.3633 0.5138 0.8899 29 1 4.0195 0.3785 -0.0014 30 1 5.8912 3.3373 0.7147 31 1 5.7587 2.3528 -2.0133 32 1 7.7578 0.9962 0.4335 33 1 5.7864 0.5146 1.7749 34 1 2.4511 6.0378 0.8900 35 1 2.4510 6.0379 -0.8899 36 1 2.3878 8.5808 0.0003 37 1 3.2883 10.2835 -1.9413 38 1 5.1043 10.3335 -1.9153 39 1 5.8283 13.1782 -1.9576 40 1 7.0745 13.3616 -0.8456 41 1 3.8375 11.2082 1.5907 42 1 2.3956 10.9009 0.5298 43 1 1.3295 4.5114 0.0004 44 1 0.2123 2.3185 0.0004 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_12220716_4974302.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:21:25 Heat of formation + Delta-G solvation = -125.052437 kcal Electronic energy + Delta-G solvation = -28738.965215 eV Core-core repulsion = 24431.651476 eV Total energy + Delta-G solvation = -4307.313739 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 337.145 amu Computer time = 0.89 seconds Orbital eigenvalues (eV) -41.91635 -41.61484 -40.64408 -39.77903 -38.49707 -38.06770 -36.89594 -34.86590 -34.48516 -32.80261 -31.07525 -29.61276 -27.96809 -26.78721 -26.71919 -26.62438 -23.81835 -22.79714 -22.42375 -21.77094 -20.35512 -19.62027 -18.81274 -18.54436 -18.08119 -18.05900 -17.70900 -17.50447 -17.20671 -17.09251 -16.61237 -16.14239 -15.97807 -15.89956 -15.78499 -15.44842 -15.29539 -15.15880 -14.64950 -14.38605 -14.27523 -14.09822 -13.65786 -13.47832 -13.44179 -13.32331 -13.10837 -12.96451 -12.49711 -12.34456 -12.09812 -11.89108 -11.82056 -11.69599 -11.41197 -11.07236 -10.97814 -10.72484 -10.41709 -10.18843 -10.10868 -8.78958 -5.05877 0.07305 0.36568 1.25376 1.39083 1.49687 1.52355 1.60735 1.92363 2.36199 2.52243 2.56389 2.62043 3.35150 3.39734 3.48149 3.52852 3.69339 3.73395 3.77216 3.86739 3.93671 4.07318 4.11107 4.14051 4.24962 4.26794 4.39557 4.46252 4.47110 4.51697 4.67438 4.69932 4.77952 4.81048 4.83791 4.97558 4.98389 5.05386 5.15944 5.22876 5.42357 5.45396 5.81726 6.19023 6.40831 6.42088 6.49430 6.79883 7.12197 7.28571 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.017 3.983 2 O -0.332 6.332 3 C 0.088 3.912 4 C -0.116 4.116 5 C -0.126 4.126 6 C -0.068 4.068 7 O -0.552 6.552 8 Si 0.785 3.215 9 C 0.096 3.904 10 O -0.314 6.314 11 C 0.038 3.962 12 C 0.509 3.491 13 O -0.576 6.576 14 N -0.695 5.695 15 C 0.109 3.891 16 H 0.070 0.930 17 C -0.121 4.121 18 C -0.131 4.131 19 H 0.151 0.849 20 C 0.520 3.480 21 N -0.837 5.837 22 O -0.596 6.596 23 C -0.117 4.117 24 C -0.164 4.164 25 C -0.158 4.158 26 H 0.068 0.932 27 H 0.114 0.886 28 H 0.064 0.936 29 H 0.156 0.844 30 H 0.086 0.914 31 H 0.392 0.608 32 H -0.297 1.297 33 H -0.284 1.284 34 H 0.123 0.877 35 H 0.128 0.872 36 H 0.425 0.575 37 H 0.132 0.868 38 H 0.064 0.936 39 H 0.420 0.580 40 H 0.405 0.595 41 H 0.063 0.937 42 H 0.136 0.864 43 H 0.165 0.835 44 H 0.161 0.839 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -13.025 1.503 -6.568 14.665 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.246 6.246 3 C 0.043 3.957 4 C -0.134 4.134 5 C -0.127 4.127 6 C -0.177 4.177 7 O -0.360 6.360 8 Si 0.690 3.310 9 C 0.051 3.949 10 O -0.228 6.228 11 C -0.040 4.040 12 C 0.295 3.705 13 O -0.455 6.455 14 N -0.349 5.349 15 C 0.004 3.996 16 H 0.088 0.912 17 C -0.160 4.160 18 C -0.152 4.152 19 H 0.168 0.832 20 C 0.306 3.694 21 N -0.400 5.400 22 O -0.477 6.477 23 C -0.156 4.156 24 C -0.183 4.183 25 C -0.177 4.177 26 H 0.087 0.913 27 H 0.132 0.868 28 H 0.083 0.917 29 H 0.173 0.827 30 H 0.103 0.897 31 H 0.241 0.759 32 H -0.225 1.225 33 H -0.211 1.211 34 H 0.140 0.860 35 H 0.146 0.854 36 H 0.264 0.736 37 H 0.151 0.849 38 H 0.083 0.917 39 H 0.251 0.749 40 H 0.236 0.764 41 H 0.082 0.918 42 H 0.154 0.846 43 H 0.183 0.817 44 H 0.179 0.821 Dipole moment (debyes) X Y Z Total from point charges -11.029 1.123 -4.964 12.147 hybrid contribution -0.097 1.229 0.214 1.251 sum -11.126 2.352 -4.750 12.324 Atomic orbital electron populations 1.23348 0.76446 1.05578 1.02344 1.86082 1.23325 1.26251 1.88991 1.18956 0.91999 0.85258 0.99466 1.20167 0.92367 0.96522 1.04298 1.19503 0.96170 0.90859 1.06140 1.25099 0.92176 1.11647 0.88805 1.86551 1.78419 1.54409 1.16579 0.94019 0.76363 0.77523 0.83090 1.18899 0.91684 0.84499 0.99803 1.86214 1.35376 1.12056 1.89112 1.22724 0.92518 0.82012 1.06766 1.20734 0.88367 0.85881 0.75524 1.90787 1.17237 1.87440 1.50011 1.45610 1.11221 1.03611 1.74472 1.22579 0.95382 0.83205 0.98456 0.91212 1.23428 1.04839 0.91711 0.96038 1.22232 0.93654 0.99201 1.00123 0.83159 1.20765 0.87774 0.77033 0.83873 1.43763 1.22593 1.55835 1.17816 1.90762 1.72144 1.60186 1.24610 1.23284 1.02140 0.91901 0.98250 1.21378 0.91967 1.00123 1.04796 1.21413 1.01577 0.90877 1.03809 0.91311 0.86767 0.91721 0.82681 0.89672 0.75902 1.22515 1.21110 0.85950 0.85397 0.73601 0.84942 0.91700 0.74881 0.76429 0.91775 0.84600 0.81719 0.82125 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.11 9.81 113.37 1.11 1.00 16 2 O -0.33 -0.37 10.50 -93.31 -0.98 -1.35 16 3 C 0.09 0.15 6.69 22.49 0.15 0.30 16 4 C -0.12 -0.33 8.59 22.36 0.19 -0.14 16 5 C -0.13 -0.75 5.27 -19.78 -0.10 -0.86 16 6 C -0.07 -0.56 2.37 71.23 0.17 -0.39 16 7 O -0.55 -5.04 12.88 -148.98 -1.92 -6.96 16 8 Si 0.79 2.96 29.91 68.60 2.05 5.01 16 9 C 0.10 0.52 6.66 22.49 0.15 0.67 16 10 O -0.31 -2.85 9.00 -74.24 -0.67 -3.52 16 11 C 0.04 -0.04 5.22 71.24 0.37 0.33 16 12 C 0.51 3.01 7.91 87.66 0.69 3.70 16 13 O -0.58 -11.32 16.10 15.99 0.26 -11.06 16 14 N -0.69 1.76 5.35 -440.03 -2.36 -0.60 16 15 C 0.11 0.16 3.91 45.52 0.18 0.34 16 16 H 0.07 0.88 7.46 -2.39 -0.02 0.86 16 17 C -0.12 0.59 7.46 31.12 0.23 0.82 16 18 C -0.13 0.65 4.34 -11.01 -0.05 0.61 16 19 H 0.15 -1.86 8.14 -2.39 -0.02 -1.88 16 20 C 0.52 1.67 7.35 87.66 0.64 2.32 16 21 N -0.84 3.31 8.87 -173.53 -1.54 1.77 16 22 O -0.60 -8.80 16.67 -3.03 -0.05 -8.85 16 23 C -0.12 0.41 7.21 31.12 0.22 0.63 16 24 C -0.16 0.25 9.03 22.35 0.20 0.45 16 25 C -0.16 0.32 9.03 22.36 0.20 0.53 16 26 H 0.07 -0.61 7.66 -2.39 -0.02 -0.63 16 27 H 0.11 -1.03 8.14 -2.38 -0.02 -1.05 16 28 H 0.06 -0.54 7.66 -2.39 -0.02 -0.55 16 29 H 0.16 -0.14 5.12 -2.91 -0.01 -0.15 16 30 H 0.09 1.17 7.82 -2.38 -0.02 1.15 16 31 H 0.39 -0.33 8.70 -74.06 -0.64 -0.97 16 32 H -0.30 -3.24 7.11 99.48 0.71 -2.53 16 33 H -0.28 -2.34 7.11 99.48 0.71 -1.63 16 34 H 0.12 -0.93 7.66 -2.39 -0.02 -0.95 16 35 H 0.13 -1.09 7.66 -2.39 -0.02 -1.11 16 36 H 0.42 -5.17 8.73 -92.71 -0.81 -5.98 16 37 H 0.13 -1.47 8.14 -2.39 -0.02 -1.49 16 38 H 0.06 -0.09 8.10 -2.39 -0.02 -0.11 16 39 H 0.42 -4.68 8.83 -92.71 -0.82 -5.50 16 40 H 0.40 -1.52 8.93 -92.70 -0.83 -2.34 16 41 H 0.06 0.21 7.41 -2.39 -0.02 0.19 16 42 H 0.14 -1.57 8.12 -2.39 -0.02 -1.59 16 43 H 0.17 -1.48 6.29 -2.91 -0.02 -1.50 16 44 H 0.16 -1.27 6.29 -2.91 -0.02 -1.29 16 Total: 0.00 -41.50 371.23 -2.80 -44.29 By element: Atomic # 1 Polarization: -27.08 SS G_CDS: -1.96 Total: -29.04 kcal Atomic # 6 Polarization: 5.94 SS G_CDS: 4.37 Total: 10.31 kcal Atomic # 7 Polarization: 5.07 SS G_CDS: -3.90 Total: 1.17 kcal Atomic # 8 Polarization: -28.39 SS G_CDS: -3.36 Total: -31.75 kcal Atomic # 14 Polarization: 2.96 SS G_CDS: 2.05 Total: 5.01 kcal Total: -41.50 -2.80 -44.29 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_12220716_4974302.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -80.759 kcal (2) G-P(sol) polarization free energy of solvation -41.498 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -122.257 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.796 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -44.294 kcal (6) G-S(sol) free energy of system = (1) + (5) -125.052 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.90 seconds