Wall clock time and date at job start Thu Mar 4 2021 13:21:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42904 * 1 3 3 C 1.35892 * 117.00509 * 2 1 4 4 C 1.38611 * 120.03110 * 180.02562 * 3 2 1 5 5 C 1.38654 * 119.89212 * 180.02562 * 4 3 2 6 6 O 1.35893 * 120.02997 * 179.97438 * 5 4 3 7 7 C 1.42906 * 116.99564 * 0.02562 * 6 5 4 8 8 C 1.50706 * 109.46699 * 179.97438 * 7 6 5 9 9 O 1.21274 * 120.00042 * 359.71986 * 8 7 6 10 10 N 1.34777 * 119.99766 * 179.97438 * 8 7 6 11 11 C 1.46496 * 120.00266 * 179.97438 * 10 8 7 12 12 H 1.09002 * 112.84436 * 23.80614 * 11 10 8 13 13 C 1.53772 * 113.61598 * 155.00257 * 11 10 8 14 14 C 1.53780 * 87.08584 * 139.98595 * 13 11 10 15 15 H 1.08998 * 113.61951 * 220.02196 * 14 13 11 16 16 C 1.50698 * 113.61412 * 89.11263 * 14 13 11 17 17 N 1.34783 * 119.99783 * 180.02562 * 16 14 13 18 18 O 1.21277 * 120.00432 * 0.02562 * 16 14 13 19 19 C 1.53775 * 113.61694 * 252.50238 * 11 10 8 20 20 C 1.38756 * 119.94419 * 0.25891 * 5 4 3 21 21 C 1.50697 * 119.97147 * 179.74573 * 20 5 4 22 22 O 1.42898 * 109.47127 * 284.99233 * 21 20 5 23 23 Si 1.86308 * 109.47158 * 164.99647 * 21 20 5 24 24 C 1.38201 * 120.05503 * 359.48279 * 20 5 4 25 25 C 1.38160 * 120.10543 * 0.51526 * 24 20 5 26 26 H 1.09004 * 109.46627 * 299.99574 * 1 2 3 27 27 H 1.09000 * 109.47293 * 59.99469 * 1 2 3 28 28 H 1.08999 * 109.47335 * 179.97438 * 1 2 3 29 29 H 1.08002 * 120.05188 * 359.97438 * 4 3 2 30 30 H 1.09000 * 109.47490 * 59.99632 * 7 6 5 31 31 H 1.09001 * 109.47232 * 299.98986 * 7 6 5 32 32 H 0.96999 * 120.00043 * 0.02562 * 10 8 7 33 33 H 1.09008 * 113.61805 * 254.53516 * 13 11 10 34 34 H 1.09001 * 113.61778 * 25.43240 * 13 11 10 35 35 H 0.96997 * 120.00025 * 0.02562 * 17 16 14 36 36 H 0.96996 * 119.99911 * 180.02562 * 17 16 14 37 37 H 1.09004 * 113.61935 * 334.56468 * 19 11 10 38 38 H 1.09009 * 113.61608 * 105.47125 * 19 11 10 39 39 H 1.09003 * 109.47609 * 44.99726 * 21 20 5 40 40 H 0.96697 * 114.00612 * 300.00341 * 22 21 20 41 41 H 1.48502 * 109.99770 * 180.02562 * 23 21 20 42 42 H 1.48495 * 109.99587 * 301.31826 * 23 21 20 43 43 H 1.07993 * 119.94663 * 180.25618 * 24 20 5 44 44 H 1.07997 * 119.96615 * 179.72194 * 25 24 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0461 1.2107 0.0000 4 6 3.4303 1.2839 -0.0005 5 6 4.0568 2.5208 0.0000 6 8 5.4137 2.5958 0.0000 7 6 6.1317 1.3602 -0.0011 8 6 7.6126 1.6398 -0.0016 9 8 8.0136 2.7843 -0.0061 10 7 8.4913 0.6179 -0.0021 11 6 9.9308 0.8896 -0.0031 12 1 10.1765 1.8712 0.4021 13 6 10.7734 -0.2510 0.5917 14 6 11.7870 0.0164 -0.5334 15 1 12.2144 -0.8906 -0.9608 16 6 12.8296 1.0438 -0.1749 17 7 13.7822 1.3772 -1.0683 18 8 12.8116 1.5706 0.9173 19 6 10.6138 0.5875 -1.3474 20 6 3.2973 3.6820 0.0065 21 6 3.9777 5.0266 0.0129 22 8 4.5047 5.2876 1.3153 23 14 2.7439 6.3491 -0.4342 24 6 1.9174 3.6065 0.0017 25 6 1.2907 2.3752 0.0011 26 1 -0.3633 0.5138 0.8901 27 1 -0.3634 0.5139 -0.8899 28 1 -0.3634 -1.0276 -0.0005 29 1 4.0197 0.3789 -0.0005 30 1 5.8699 0.7886 -0.8916 31 1 5.8701 0.7872 0.8884 32 1 8.1705 -0.2975 -0.0026 33 1 11.1597 -0.0348 1.5879 34 1 10.2948 -1.2280 0.5252 35 1 13.7964 0.9562 -1.9420 36 1 14.4535 2.0382 -0.8375 37 1 10.0916 -0.1604 -1.9442 38 1 10.8713 1.4806 -1.9168 39 1 4.7896 5.0265 -0.7143 40 1 3.8367 5.3025 2.0142 41 1 3.4027 7.6799 -0.4320 42 1 2.1649 6.0717 -1.7732 43 1 1.3279 4.5114 0.0025 44 1 0.2122 2.3188 0.0018 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_12220716_4974312.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:21:28 Heat of formation + Delta-G solvation = -126.475288 kcal Electronic energy + Delta-G solvation = -28814.302571 eV Core-core repulsion = 24506.927133 eV Total energy + Delta-G solvation = -4307.375438 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 337.145 amu Computer time = 0.97 seconds Orbital eigenvalues (eV) -41.95897 -41.64557 -40.66427 -39.82809 -38.55379 -38.12373 -36.92372 -34.87682 -34.50328 -32.28924 -31.44758 -29.71022 -28.35354 -26.81337 -26.74567 -26.11769 -23.85049 -22.80404 -22.49250 -21.79544 -20.36983 -19.95344 -18.66415 -18.25839 -18.11800 -18.01301 -17.70649 -17.56777 -17.21965 -16.98426 -16.67587 -16.51607 -16.03050 -15.92346 -15.82582 -15.38456 -15.36350 -15.13952 -14.64073 -14.46869 -14.35127 -13.88539 -13.67430 -13.45487 -13.33552 -13.32292 -13.19487 -13.05013 -12.48714 -12.27252 -12.01721 -11.89683 -11.87369 -11.71541 -11.62731 -11.09579 -11.00028 -10.73109 -10.36550 -10.20973 -9.70145 -9.10266 -5.04611 0.20644 0.30021 1.30712 1.35317 1.42861 1.51193 1.63652 1.97805 2.25396 2.51276 2.55894 2.58313 3.33944 3.38953 3.50484 3.59648 3.69233 3.73498 3.83043 3.85765 3.91918 4.01452 4.08377 4.16561 4.23838 4.34640 4.39213 4.44608 4.46695 4.51093 4.60651 4.66253 4.76411 4.80751 4.81987 4.96379 5.02037 5.04076 5.23504 5.27709 5.41422 5.48288 5.81242 6.12060 6.35856 6.40166 6.42698 6.85184 7.08411 7.27977 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.016 3.984 2 O -0.330 6.330 3 C 0.164 3.836 4 C -0.253 4.253 5 C 0.172 3.828 6 O -0.308 6.308 7 C 0.037 3.963 8 C 0.511 3.489 9 O -0.574 6.574 10 N -0.695 5.695 11 C 0.109 3.891 12 H 0.071 0.929 13 C -0.117 4.117 14 C -0.130 4.130 15 H 0.151 0.849 16 C 0.520 3.480 17 N -0.837 5.837 18 O -0.595 6.595 19 C -0.122 4.122 20 C -0.204 4.204 21 C -0.071 4.071 22 O -0.559 6.559 23 Si 0.797 3.203 24 C -0.031 4.031 25 C -0.237 4.237 26 H 0.071 0.929 27 H 0.068 0.932 28 H 0.116 0.884 29 H 0.153 0.847 30 H 0.126 0.874 31 H 0.122 0.878 32 H 0.425 0.575 33 H 0.065 0.935 34 H 0.135 0.865 35 H 0.419 0.581 36 H 0.405 0.595 37 H 0.132 0.868 38 H 0.064 0.936 39 H 0.079 0.921 40 H 0.391 0.609 41 H -0.305 1.305 42 H -0.278 1.278 43 H 0.167 0.833 44 H 0.162 0.838 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.863 -9.732 -3.755 11.966 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.078 4.078 2 O -0.243 6.243 3 C 0.118 3.882 4 C -0.272 4.272 5 C 0.126 3.874 6 O -0.220 6.220 7 C -0.041 4.041 8 C 0.297 3.703 9 O -0.452 6.452 10 N -0.349 5.349 11 C 0.004 3.996 12 H 0.089 0.911 13 C -0.156 4.156 14 C -0.152 4.152 15 H 0.169 0.831 16 C 0.306 3.694 17 N -0.400 5.400 18 O -0.476 6.476 19 C -0.161 4.161 20 C -0.205 4.205 21 C -0.179 4.179 22 O -0.367 6.367 23 Si 0.701 3.299 24 C -0.048 4.048 25 C -0.255 4.255 26 H 0.089 0.911 27 H 0.087 0.913 28 H 0.134 0.866 29 H 0.171 0.829 30 H 0.144 0.856 31 H 0.140 0.860 32 H 0.263 0.737 33 H 0.083 0.917 34 H 0.153 0.847 35 H 0.251 0.749 36 H 0.236 0.764 37 H 0.150 0.850 38 H 0.083 0.917 39 H 0.096 0.904 40 H 0.240 0.760 41 H -0.233 1.233 42 H -0.204 1.204 43 H 0.183 0.817 44 H 0.180 0.820 Dipole moment (debyes) X Y Z Total from point charges -5.186 -8.099 -3.928 10.388 hybrid contribution 1.027 -0.404 -0.397 1.173 sum -4.159 -8.503 -4.325 10.407 Atomic orbital electron populations 1.23414 0.75930 1.05715 1.02778 1.86053 1.23818 1.26537 1.87921 1.18869 0.91575 0.85098 0.92686 1.20545 0.93554 0.97286 1.15845 1.18642 0.81633 0.93398 0.93716 1.86228 1.15755 1.31807 1.88196 1.22749 0.88147 0.86460 1.06769 1.20633 0.88784 0.85303 0.75604 1.90782 1.80850 1.23625 1.49990 1.45617 1.05341 1.09525 1.74401 1.22601 0.78785 0.99774 0.98468 0.91052 1.23282 0.94528 0.99439 0.98308 1.22230 0.93558 0.99298 1.00084 0.83147 1.20749 0.82499 0.82458 0.83719 1.43759 1.31471 1.45889 1.18897 1.90764 1.75696 1.56110 1.25033 1.23428 0.94316 1.02267 0.96041 1.19751 0.93895 0.93971 1.12913 1.25175 1.04407 0.99978 0.88327 1.86547 1.39339 1.93865 1.16911 0.94110 0.80292 0.72904 0.82545 1.20860 0.91430 0.98672 0.93888 1.21454 1.01816 0.91126 1.11150 0.91068 0.91312 0.86606 0.82915 0.85629 0.86025 0.73651 0.91661 0.84667 0.74894 0.76414 0.85028 0.91694 0.90370 0.76023 1.23342 1.20444 0.81653 0.82047 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.11 9.81 113.37 1.11 1.00 16 2 O -0.33 -0.14 10.49 -92.33 -0.97 -1.11 16 3 C 0.16 0.26 6.68 22.49 0.15 0.41 16 4 C -0.25 -0.69 8.97 22.46 0.20 -0.48 16 5 C 0.17 1.18 6.66 22.49 0.15 1.33 16 6 O -0.31 -3.24 8.99 -73.31 -0.66 -3.90 16 7 C 0.04 0.05 5.22 71.24 0.37 0.42 16 8 C 0.51 3.71 7.91 87.66 0.69 4.40 16 9 O -0.57 -11.74 16.10 16.03 0.26 -11.48 16 10 N -0.69 0.83 5.35 -440.07 -2.36 -1.53 16 11 C 0.11 0.26 3.89 45.51 0.18 0.44 16 12 H 0.07 0.95 7.39 -2.39 -0.02 0.94 16 13 C -0.12 0.32 7.20 31.12 0.22 0.54 16 14 C -0.13 0.58 4.34 -11.01 -0.05 0.53 16 15 H 0.15 -1.78 8.14 -2.39 -0.02 -1.80 16 16 C 0.52 1.88 7.36 87.66 0.64 2.52 16 17 N -0.84 3.05 8.87 -173.53 -1.54 1.51 16 18 O -0.60 -9.01 16.58 -3.02 -0.05 -9.06 16 19 C -0.12 0.49 7.46 31.12 0.23 0.72 16 20 C -0.20 -1.07 5.28 -19.75 -0.10 -1.17 16 21 C -0.07 -0.53 2.37 71.23 0.17 -0.36 16 22 O -0.56 -5.33 12.88 -148.98 -1.92 -7.24 16 23 Si 0.80 1.19 29.91 68.60 2.05 3.24 16 24 C -0.03 0.03 8.65 22.24 0.19 0.22 16 25 C -0.24 0.39 9.04 22.38 0.20 0.59 16 26 H 0.07 -0.65 7.66 -2.38 -0.02 -0.67 16 27 H 0.07 -0.60 7.66 -2.39 -0.02 -0.62 16 28 H 0.12 -1.13 8.14 -2.39 -0.02 -1.15 16 29 H 0.15 -0.28 6.30 -2.91 -0.02 -0.30 16 30 H 0.13 -0.70 7.66 -2.39 -0.02 -0.72 16 31 H 0.12 -0.53 7.66 -2.39 -0.02 -0.55 16 32 H 0.42 -4.44 8.73 -92.71 -0.81 -5.25 16 33 H 0.06 0.25 7.43 -2.38 -0.02 0.23 16 34 H 0.14 -1.43 8.12 -2.39 -0.02 -1.45 16 35 H 0.42 -4.54 8.83 -92.71 -0.82 -5.36 16 36 H 0.41 -1.41 8.93 -92.71 -0.83 -2.24 16 37 H 0.13 -1.34 8.14 -2.39 -0.02 -1.36 16 38 H 0.06 -0.05 8.09 -2.38 -0.02 -0.07 16 39 H 0.08 1.06 7.82 -2.39 -0.02 1.04 16 40 H 0.39 -0.27 8.70 -74.06 -0.64 -0.91 16 41 H -0.30 -2.97 7.11 99.48 0.71 -2.27 16 42 H -0.28 -1.33 7.11 99.48 0.71 -0.62 16 43 H 0.17 -1.22 5.11 -2.91 -0.01 -1.24 16 44 H 0.16 -1.20 6.29 -2.91 -0.02 -1.22 16 Total: 0.00 -41.28 371.06 -2.78 -44.05 By element: Atomic # 1 Polarization: -23.62 SS G_CDS: -1.96 Total: -25.58 kcal Atomic # 6 Polarization: 6.74 SS G_CDS: 4.37 Total: 11.11 kcal Atomic # 7 Polarization: 3.87 SS G_CDS: -3.90 Total: -0.02 kcal Atomic # 8 Polarization: -29.46 SS G_CDS: -3.34 Total: -32.80 kcal Atomic # 14 Polarization: 1.19 SS G_CDS: 2.05 Total: 3.24 kcal Total: -41.28 -2.78 -44.05 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_12220716_4974312.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -82.423 kcal (2) G-P(sol) polarization free energy of solvation -41.276 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -123.699 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.776 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -44.053 kcal (6) G-S(sol) free energy of system = (1) + (5) -126.475 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.97 seconds