Wall clock time and date at job start Thu Mar 4 2021 13:21:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42895 * 1 3 3 C 1.35998 * 116.99860 * 2 1 4 4 C 1.39158 * 120.07355 * 180.02562 * 3 2 1 5 5 O 1.35987 * 120.07341 * 359.94914 * 4 3 2 6 6 C 1.42901 * 117.00199 * 180.02562 * 5 4 3 7 7 C 1.50702 * 109.47398 * 180.02562 * 6 5 4 8 8 O 1.21278 * 120.00022 * 359.97438 * 7 6 5 9 9 N 1.34776 * 119.99916 * 180.02562 * 7 6 5 10 10 C 1.46498 * 119.99811 * 180.02562 * 9 7 6 11 11 H 1.08998 * 112.85299 * 23.79825 * 10 9 7 12 12 C 1.53783 * 113.61513 * 154.99400 * 10 9 7 13 13 C 1.53780 * 87.08112 * 139.97742 * 12 10 9 14 14 H 1.09000 * 113.61850 * 220.02023 * 13 12 10 15 15 C 1.50699 * 113.61330 * 89.19919 * 13 12 10 16 16 N 1.34779 * 120.00382 * 179.97438 * 15 13 12 17 17 O 1.21276 * 120.00040 * 0.02562 * 15 13 12 18 18 C 1.53781 * 113.61042 * 252.49219 * 10 9 7 19 19 C 1.38561 * 119.85205 * 179.97438 * 4 3 2 20 20 C 1.38245 * 120.00240 * 359.97438 * 19 4 3 21 21 C 1.38256 * 120.14249 * 0.02562 * 20 19 4 22 22 C 1.50705 * 119.92175 * 179.97438 * 21 20 19 23 23 O 1.42900 * 109.46942 * 244.99696 * 22 21 20 24 24 Si 1.86293 * 109.47351 * 5.00376 * 22 21 20 25 25 C 1.38234 * 120.14940 * 359.97438 * 21 20 19 26 26 H 1.08990 * 109.47690 * 60.00392 * 1 2 3 27 27 H 1.09000 * 109.46784 * 180.02562 * 1 2 3 28 28 H 1.08999 * 109.47483 * 299.99541 * 1 2 3 29 29 H 1.09004 * 109.47077 * 300.00595 * 6 5 4 30 30 H 1.09004 * 109.47037 * 60.00343 * 6 5 4 31 31 H 0.97000 * 119.99802 * 359.97438 * 9 7 6 32 32 H 1.08994 * 113.61275 * 254.52810 * 12 10 9 33 33 H 1.09003 * 113.61375 * 25.34986 * 12 10 9 34 34 H 0.97001 * 119.99310 * 0.02562 * 16 15 13 35 35 H 0.96996 * 120.00873 * 180.02562 * 16 15 13 36 36 H 1.08995 * 113.61421 * 334.56411 * 18 10 9 37 37 H 1.08998 * 113.61328 * 105.47124 * 18 10 9 38 38 H 1.08005 * 119.99996 * 180.02562 * 19 4 3 39 39 H 1.07998 * 119.92777 * 179.72640 * 20 19 4 40 40 H 1.09002 * 109.46563 * 125.00448 * 22 21 20 41 41 H 0.96705 * 113.99895 * 180.02562 * 23 22 21 42 42 H 1.48506 * 109.99833 * 299.99512 * 24 22 21 43 43 H 1.48498 * 110.00514 * 61.31697 * 24 22 21 44 44 H 1.08006 * 120.00369 * 180.02562 * 25 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0463 1.2118 0.0000 4 6 3.4359 1.2864 -0.0005 5 8 4.1795 0.1479 0.0000 6 6 5.6003 0.3009 -0.0001 7 6 6.2519 -1.0580 -0.0001 8 8 5.5671 -2.0589 0.0004 9 7 7.5958 -1.1609 0.0004 10 6 8.2292 -2.4818 -0.0002 11 1 7.5837 -3.2607 -0.4063 12 6 9.6472 -2.4848 -0.5952 13 6 10.0320 -3.4611 0.5289 14 1 11.0160 -3.2689 0.9564 15 6 9.8234 -4.9094 0.1682 16 7 10.1199 -5.8755 1.0600 17 8 9.3896 -5.2056 -0.9249 18 6 8.8772 -2.8548 1.3437 19 6 4.0602 2.5234 -0.0011 20 6 3.3028 3.6800 -0.0016 21 6 1.9222 3.6057 -0.0011 22 6 1.1014 4.8696 -0.0011 23 8 0.3649 4.9592 1.2202 24 14 2.2305 6.3434 -0.1550 25 6 1.2931 2.3748 -0.0005 26 1 -0.3634 0.5137 -0.8899 27 1 -0.3633 -1.0277 0.0005 28 1 -0.3634 0.5137 0.8900 29 1 5.9065 0.8504 -0.8902 30 1 5.9065 0.8510 0.8898 31 1 8.1435 -0.3603 0.0004 32 1 9.7016 -2.9229 -1.5917 33 1 10.1506 -1.5202 -0.5288 34 1 10.4673 -5.6385 1.9341 35 1 9.9860 -6.8077 0.8278 36 1 9.1706 -1.9918 1.9413 37 1 8.3100 -3.5917 1.9123 38 1 5.1385 2.5842 -0.0019 39 1 3.7906 4.6435 0.0024 40 1 0.4088 4.8530 -0.8426 41 1 -0.1875 5.7500 1.2893 42 1 3.1797 6.3774 0.9865 43 1 2.9788 6.2784 -1.4360 44 1 0.2144 2.3196 -0.0005 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_12220716_60476.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:21:34 Heat of formation + Delta-G solvation = -122.481751 kcal Electronic energy + Delta-G solvation = -28494.733541 eV Core-core repulsion = 24187.531275 eV Total energy + Delta-G solvation = -4307.202265 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 337.145 amu Computer time = 1.05 seconds Orbital eigenvalues (eV) -42.00003 -41.69932 -40.65620 -39.46132 -38.86115 -38.30005 -37.03956 -34.87616 -34.50450 -32.23699 -31.62324 -29.88506 -28.53393 -26.87779 -26.76590 -26.11198 -23.83149 -22.93210 -22.46845 -21.78979 -20.36536 -19.86317 -18.61583 -18.52141 -18.24246 -18.06821 -18.05053 -17.63142 -17.55228 -17.13309 -16.71083 -16.34617 -16.01245 -15.90539 -15.75879 -15.53904 -15.43968 -15.25818 -14.51050 -14.32821 -14.21370 -14.08130 -13.72726 -13.60361 -13.50839 -13.33729 -13.10100 -12.82508 -12.44887 -12.32423 -12.26091 -12.09605 -11.89916 -11.84697 -11.71303 -11.09895 -11.00053 -10.72466 -10.30483 -10.21267 -9.91361 -9.04380 -4.89579 0.03386 0.10088 1.32439 1.34689 1.40360 1.51643 1.69289 1.99194 2.20990 2.39343 2.49275 2.52231 3.33676 3.36805 3.39483 3.45464 3.64276 3.68671 3.72343 3.84454 3.86306 3.90830 4.01240 4.09685 4.14967 4.24396 4.25571 4.27867 4.46067 4.48006 4.51562 4.62555 4.66512 4.76719 4.82703 4.84840 4.92522 4.96524 5.03958 5.22438 5.40473 5.43935 5.81867 5.85693 6.33756 6.40794 6.44587 6.91778 7.08171 7.28512 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.018 3.982 2 O -0.333 6.333 3 C 0.082 3.918 4 C 0.085 3.915 5 O -0.312 6.312 6 C 0.034 3.966 7 C 0.511 3.489 8 O -0.576 6.576 9 N -0.694 5.694 10 C 0.109 3.891 11 H 0.072 0.928 12 C -0.117 4.117 13 C -0.130 4.130 14 H 0.151 0.849 15 C 0.520 3.480 16 N -0.837 5.837 17 O -0.596 6.596 18 C -0.122 4.122 19 C -0.160 4.160 20 C -0.133 4.133 21 C -0.085 4.085 22 C -0.082 4.082 23 O -0.565 6.565 24 Si 0.779 3.221 25 C -0.147 4.147 26 H 0.068 0.932 27 H 0.113 0.887 28 H 0.065 0.935 29 H 0.126 0.874 30 H 0.129 0.871 31 H 0.425 0.575 32 H 0.064 0.936 33 H 0.135 0.865 34 H 0.420 0.580 35 H 0.405 0.595 36 H 0.132 0.868 37 H 0.065 0.935 38 H 0.173 0.827 39 H 0.133 0.867 40 H 0.092 0.908 41 H 0.404 0.596 42 H -0.290 1.290 43 H -0.285 1.285 44 H 0.153 0.847 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.283 9.260 3.894 10.920 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 O -0.247 6.247 3 C 0.037 3.963 4 C 0.039 3.961 5 O -0.225 6.225 6 C -0.043 4.043 7 C 0.297 3.703 8 O -0.454 6.454 9 N -0.348 5.348 10 C 0.003 3.997 11 H 0.090 0.910 12 C -0.156 4.156 13 C -0.152 4.152 14 H 0.168 0.832 15 C 0.306 3.694 16 N -0.400 5.400 17 O -0.476 6.476 18 C -0.161 4.161 19 C -0.178 4.178 20 C -0.150 4.150 21 C -0.086 4.086 22 C -0.191 4.191 23 O -0.375 6.375 24 Si 0.684 3.316 25 C -0.166 4.166 26 H 0.087 0.913 27 H 0.131 0.869 28 H 0.084 0.916 29 H 0.143 0.857 30 H 0.146 0.854 31 H 0.264 0.736 32 H 0.083 0.917 33 H 0.153 0.847 34 H 0.251 0.749 35 H 0.236 0.764 36 H 0.150 0.850 37 H 0.083 0.917 38 H 0.191 0.809 39 H 0.151 0.849 40 H 0.110 0.890 41 H 0.255 0.745 42 H -0.218 1.218 43 H -0.212 1.212 44 H 0.170 0.830 Dipole moment (debyes) X Y Z Total from point charges 4.633 7.860 3.212 9.673 hybrid contribution -0.084 -0.987 0.077 0.993 sum 4.549 6.873 3.289 8.875 Atomic orbital electron populations 1.23343 0.76463 1.05444 1.02359 1.86202 1.23361 1.26202 1.88905 1.18669 0.89785 0.85838 1.02023 1.18508 0.88434 0.86240 1.02884 1.86228 1.18298 1.28732 1.89278 1.22801 0.79313 0.95254 1.06982 1.20623 0.83389 0.90686 0.75587 1.90777 1.64266 1.40303 1.50042 1.45613 1.04898 1.09947 1.74384 1.22611 0.93589 0.84964 0.98491 0.91020 1.23281 0.93240 1.00724 0.98312 1.22226 1.03317 0.89556 1.00072 0.83180 1.20746 0.75591 0.89353 0.83738 1.43757 1.67654 1.09670 1.18910 1.90762 1.47195 1.84705 1.24954 1.23427 0.94541 1.02047 0.96041 1.21273 1.02074 0.89409 1.05049 1.20832 0.93260 0.98264 1.02676 1.19494 0.93473 0.94469 1.01139 1.24900 1.01605 1.02126 0.90441 1.86449 1.63815 1.50275 1.36961 0.94262 0.78662 0.82250 0.76450 1.21076 1.00956 0.90044 1.04517 0.91296 0.86893 0.91627 0.85661 0.85351 0.73588 0.91670 0.84658 0.74889 0.76409 0.85021 0.91661 0.80935 0.84941 0.88971 0.74518 1.21778 1.21237 0.82959 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.07 9.81 113.37 1.11 1.18 16 2 O -0.33 -4.47 10.28 -79.67 -0.82 -5.29 16 3 C 0.08 0.95 6.70 22.57 0.15 1.10 16 4 C 0.08 0.84 6.70 22.57 0.15 0.99 16 5 O -0.31 -3.82 9.45 -67.00 -0.63 -4.46 16 6 C 0.03 0.03 5.22 71.24 0.37 0.41 16 7 C 0.51 3.58 7.91 87.66 0.69 4.27 16 8 O -0.58 -11.72 16.10 16.01 0.26 -11.47 16 9 N -0.69 1.17 5.35 -440.04 -2.36 -1.18 16 10 C 0.11 0.21 3.89 45.52 0.18 0.39 16 11 H 0.07 0.92 7.40 -2.39 -0.02 0.91 16 12 C -0.12 0.37 7.20 31.12 0.22 0.59 16 13 C -0.13 0.62 4.34 -11.01 -0.05 0.57 16 14 H 0.15 -1.82 8.14 -2.39 -0.02 -1.84 16 15 C 0.52 1.70 7.36 87.66 0.65 2.35 16 16 N -0.84 3.31 8.87 -173.53 -1.54 1.77 16 17 O -0.60 -8.78 16.59 -3.02 -0.05 -8.83 16 18 C -0.12 0.53 7.46 31.12 0.23 0.76 16 19 C -0.16 -0.55 9.04 22.35 0.20 -0.35 16 20 C -0.13 -0.60 8.66 22.28 0.19 -0.41 16 21 C -0.09 -0.47 5.38 -19.86 -0.11 -0.57 16 22 C -0.08 0.07 2.79 71.24 0.20 0.27 16 23 O -0.56 0.32 12.81 -148.98 -1.91 -1.59 16 24 Si 0.78 -2.78 29.85 68.60 2.05 -0.74 16 25 C -0.15 -1.06 8.67 22.35 0.19 -0.87 16 26 H 0.07 0.03 7.66 -2.39 -0.02 0.01 16 27 H 0.11 0.09 8.14 -2.39 -0.02 0.07 16 28 H 0.07 0.09 7.66 -2.39 -0.02 0.08 16 29 H 0.13 -0.73 7.66 -2.39 -0.02 -0.75 16 30 H 0.13 -0.83 7.66 -2.39 -0.02 -0.85 16 31 H 0.43 -4.77 8.73 -92.71 -0.81 -5.58 16 32 H 0.06 0.22 7.43 -2.39 -0.02 0.20 16 33 H 0.14 -1.49 8.12 -2.39 -0.02 -1.51 16 34 H 0.42 -4.66 8.83 -92.71 -0.82 -5.48 16 35 H 0.41 -1.54 8.93 -92.71 -0.83 -2.37 16 36 H 0.13 -1.38 8.14 -2.39 -0.02 -1.40 16 37 H 0.06 -0.07 8.10 -2.39 -0.02 -0.09 16 38 H 0.17 -0.85 6.30 -2.91 -0.02 -0.87 16 39 H 0.13 0.26 4.85 -2.91 -0.01 0.24 16 40 H 0.09 -0.44 7.96 -2.39 -0.02 -0.45 16 41 H 0.40 -4.57 8.74 -74.05 -0.65 -5.22 16 42 H -0.29 -0.87 7.04 99.48 0.70 -0.17 16 43 H -0.29 -0.42 7.11 99.48 0.71 0.29 16 44 H 0.15 0.54 6.30 -2.91 -0.02 0.52 16 Total: 0.00 -42.76 371.37 -2.58 -45.34 By element: Atomic # 1 Polarization: -22.27 SS G_CDS: -1.97 Total: -24.24 kcal Atomic # 6 Polarization: 6.29 SS G_CDS: 4.39 Total: 10.68 kcal Atomic # 7 Polarization: 4.48 SS G_CDS: -3.90 Total: 0.59 kcal Atomic # 8 Polarization: -28.48 SS G_CDS: -3.15 Total: -31.63 kcal Atomic # 14 Polarization: -2.78 SS G_CDS: 2.05 Total: -0.74 kcal Total: -42.76 -2.58 -45.34 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_12220716_60476.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -77.138 kcal (2) G-P(sol) polarization free energy of solvation -42.763 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -119.901 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.581 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -45.344 kcal (6) G-S(sol) free energy of system = (1) + (5) -122.482 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.05 seconds