Wall clock time and date at job start Thu Mar 4 2021 13:21:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34776 * 1 3 3 O 1.21281 * 119.99927 * 2 1 4 4 C 1.50699 * 119.99937 * 179.97438 * 2 1 3 5 5 H 1.08996 * 112.85359 * 311.20143 * 4 2 1 6 6 C 1.54057 * 113.61592 * 82.51257 * 4 2 1 7 7 C 1.53779 * 86.98475 * 139.97790 * 6 4 2 8 8 H 1.09005 * 113.61091 * 219.97647 * 7 6 4 9 9 N 1.46498 * 113.61663 * 89.16368 * 7 6 4 10 10 C 1.34774 * 120.00352 * 105.86349 * 9 7 6 11 11 O 1.21284 * 119.99908 * 359.97438 * 10 9 7 12 12 C 1.50694 * 120.00104 * 180.02562 * 10 9 7 13 13 O 1.42898 * 109.47501 * 179.97438 * 12 10 9 14 14 C 1.35908 * 117.00425 * 180.02562 * 13 12 10 15 15 C 1.38672 * 120.05986 * 359.97438 * 14 13 12 16 16 C 1.38195 * 119.95800 * 180.02562 * 15 14 13 17 17 C 1.38242 * 120.06829 * 359.97438 * 16 15 14 18 18 C 1.50701 * 119.93920 * 179.97438 * 17 16 15 19 19 O 1.42895 * 109.47234 * 64.99936 * 18 17 16 20 20 Si 1.86300 * 109.47028 * 185.00131 * 18 17 16 21 21 C 1.38285 * 120.11664 * 0.02562 * 17 16 15 22 22 C 1.38194 * 120.05147 * 359.97438 * 21 17 16 23 23 Br 1.89097 * 120.04138 * 180.02562 * 22 21 17 24 24 C 1.53785 * 113.61232 * 180.02562 * 4 2 1 25 25 H 0.97003 * 119.99934 * 180.02562 * 1 2 3 26 26 H 0.97002 * 120.00354 * 0.02562 * 1 2 3 27 27 H 1.08992 * 113.61313 * 25.47158 * 6 4 2 28 28 H 1.09002 * 113.69117 * 254.49042 * 6 4 2 29 29 H 0.96997 * 119.99426 * 285.85922 * 9 7 6 30 30 H 1.09001 * 109.47437 * 59.99431 * 12 10 9 31 31 H 1.09001 * 109.47519 * 299.99758 * 12 10 9 32 32 H 1.08004 * 120.02559 * 0.04926 * 15 14 13 33 33 H 1.07992 * 119.96619 * 179.72212 * 16 15 14 34 34 H 1.08998 * 109.46624 * 305.00037 * 18 17 16 35 35 H 0.96701 * 113.99849 * 59.99929 * 19 18 17 36 36 H 1.48495 * 109.99970 * 179.97438 * 20 18 17 37 37 H 1.48506 * 109.99992 * 301.31949 * 20 18 17 38 38 H 1.07999 * 119.97529 * 180.02562 * 21 17 16 39 39 H 1.08992 * 113.61485 * 105.47870 * 24 4 2 40 40 H 1.08996 * 113.61112 * 334.56832 * 24 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3478 0.0000 0.0000 3 8 1.9541 1.0503 0.0000 4 6 2.1012 -1.3051 0.0006 5 1 1.7399 -2.0022 0.7566 6 6 2.2505 -1.9322 -1.3987 7 6 3.6826 -2.3120 -0.9866 8 1 4.4152 -2.1816 -1.7831 9 7 3.7781 -3.6204 -0.3345 10 6 4.2958 -4.6702 -1.0026 11 8 4.6821 -4.5318 -2.1440 12 6 4.3935 -6.0161 -0.3320 13 8 4.9709 -6.9588 -1.2376 14 6 5.1300 -8.2307 -0.7859 15 6 4.7392 -8.5644 0.5021 16 6 4.9025 -9.8582 0.9594 17 6 5.4545 -10.8201 0.1340 18 6 5.6317 -12.2300 0.6359 19 8 4.3505 -12.8116 0.8850 20 14 6.5322 -13.2372 -0.6469 21 6 5.8453 -10.4906 -1.1509 22 6 5.6843 -9.1982 -1.6132 23 35 6.2181 -8.7481 -3.3705 24 6 3.6295 -1.1340 0.0011 25 1 -0.4850 -0.8401 0.0004 26 1 -0.4851 0.8400 -0.0004 27 1 2.2078 -1.2053 -2.2096 28 1 1.6014 -2.7920 -1.5648 29 1 3.4689 -3.7310 0.5782 30 1 3.3972 -6.3522 -0.0447 31 1 5.0197 -5.9348 0.5564 32 1 4.3071 -7.8138 1.1473 33 1 4.6023 -10.1172 1.9639 34 1 6.2105 -12.2167 1.5595 35 1 3.7804 -12.8558 0.1051 36 1 6.7139 -14.6295 -0.1637 37 1 5.7690 -13.2365 -1.9208 38 1 6.2759 -11.2439 -1.7938 39 1 4.0927 -1.3501 0.9638 40 1 3.9632 -0.1892 -0.4278 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_22_12220716_6201210.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:21:38 Heat of formation + Delta-G solvation = -75.258729 kcal Electronic energy + Delta-G solvation = -26100.652828 eV Core-core repulsion = 21929.900114 eV Total energy + Delta-G solvation = -4170.752713 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 385.040 amu Computer time = 0.76 seconds Orbital eigenvalues (eV) -41.95033 -41.51601 -40.43232 -39.31738 -38.42163 -37.37690 -34.75126 -34.42392 -33.51804 -32.23859 -30.57586 -29.75567 -27.33042 -26.94374 -26.39639 -24.20732 -22.71810 -22.30379 -21.95336 -20.45592 -19.65957 -18.88366 -18.47783 -18.21321 -17.84235 -17.65143 -17.24412 -16.94236 -16.52982 -16.32523 -16.15111 -15.84757 -15.71526 -15.35102 -15.28267 -14.81836 -14.63268 -14.38927 -14.09824 -14.06927 -13.68515 -13.44814 -13.41564 -13.00491 -12.53482 -12.37252 -12.30641 -11.94721 -11.83785 -11.78126 -11.72305 -11.08309 -11.01098 -10.93006 -10.75415 -10.69442 -10.29262 -10.05776 -9.36414 -5.02002 -0.10187 -0.00167 0.68026 1.19660 1.22280 1.35551 1.53137 1.54311 1.90253 2.30053 2.31110 2.46255 3.18727 3.24148 3.26859 3.30046 3.41542 3.53543 3.60118 3.64099 3.68806 3.75664 3.80209 3.96625 4.00914 4.23461 4.35740 4.38710 4.52687 4.54377 4.63558 4.65652 4.70013 4.72843 4.90355 4.91250 5.19266 5.30574 5.36115 5.70979 5.91953 6.20144 6.24852 6.30458 6.97449 7.19991 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.855 5.855 2 C 0.526 3.474 3 O -0.539 6.539 4 C -0.142 4.142 5 H 0.114 0.886 6 C -0.133 4.133 7 C 0.122 3.878 8 H 0.112 0.888 9 N -0.712 5.712 10 C 0.518 3.482 11 O -0.502 6.502 12 C 0.038 3.962 13 O -0.274 6.274 14 C 0.161 3.839 15 C -0.205 4.205 16 C -0.035 4.035 17 C -0.149 4.149 18 C -0.067 4.067 19 O -0.529 6.529 20 Si 0.677 3.323 21 C -0.051 4.051 22 C -0.119 4.119 23 Br -0.023 7.023 24 C -0.121 4.121 25 H 0.402 0.598 26 H 0.402 0.598 27 H 0.099 0.901 28 H 0.082 0.918 29 H 0.403 0.597 30 H 0.097 0.903 31 H 0.099 0.901 32 H 0.139 0.861 33 H 0.137 0.863 34 H 0.121 0.879 35 H 0.377 0.623 36 H -0.253 1.253 37 H -0.256 1.256 38 H 0.143 0.857 39 H 0.082 0.918 40 H 0.113 0.887 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.121 -1.422 5.146 6.184 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.418 5.418 2 C 0.310 3.690 3 O -0.416 6.416 4 C -0.164 4.164 5 H 0.132 0.868 6 C -0.172 4.172 7 C 0.017 3.983 8 H 0.130 0.870 9 N -0.365 5.365 10 C 0.303 3.697 11 O -0.374 6.374 12 C -0.041 4.041 13 O -0.185 6.185 14 C 0.113 3.887 15 C -0.224 4.224 16 C -0.053 4.053 17 C -0.151 4.151 18 C -0.177 4.177 19 O -0.335 6.335 20 Si 0.578 3.422 21 C -0.070 4.070 22 C -0.199 4.199 23 Br 0.062 6.938 24 C -0.159 4.159 25 H 0.230 0.770 26 H 0.233 0.767 27 H 0.117 0.883 28 H 0.100 0.900 29 H 0.237 0.763 30 H 0.115 0.885 31 H 0.117 0.883 32 H 0.157 0.843 33 H 0.155 0.845 34 H 0.139 0.861 35 H 0.225 0.775 36 H -0.177 1.177 37 H -0.181 1.181 38 H 0.160 0.840 39 H 0.100 0.900 40 H 0.131 0.869 Dipole moment (debyes) X Y Z Total from point charges -1.791 -1.239 3.490 4.114 hybrid contribution -2.254 -0.158 1.114 2.519 sum -4.045 -1.396 4.604 6.286 Atomic orbital electron populations 1.43914 1.07320 1.12662 1.77877 1.20445 0.82596 0.91113 0.74823 1.90775 1.68217 1.33472 1.49095 1.22924 0.97392 0.95514 1.00549 0.86835 1.23414 0.97601 1.01013 0.95170 1.21853 0.98082 0.81558 0.96812 0.86975 1.45475 1.64650 1.08847 1.17572 1.19957 0.77919 0.85010 0.86847 1.90823 1.45582 1.83907 1.17097 1.22536 1.00613 0.87820 0.93136 1.86279 1.76813 1.15840 1.39571 1.18630 0.94169 0.83904 0.91976 1.21284 1.07422 0.98794 0.94911 1.20953 0.93600 0.91077 0.99679 1.20188 1.03612 0.97182 0.94110 1.24903 0.90223 0.92719 1.09847 1.86606 1.25860 1.82597 1.38472 0.94991 0.89231 0.81125 0.76901 1.20910 0.96774 0.94013 0.95312 1.21000 1.10067 0.94607 0.94270 1.96821 1.89834 1.93948 1.13156 1.23249 0.92998 0.99174 1.00477 0.76993 0.76690 0.88283 0.89965 0.76282 0.88483 0.88339 0.84298 0.84492 0.86086 0.77532 1.17749 1.18078 0.83980 0.89977 0.86898 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.85 2.76 8.87 31.22 0.28 3.04 16 2 C 0.53 -0.11 7.63 -10.99 -0.08 -0.19 16 3 O -0.54 -2.50 16.74 5.56 0.09 -2.41 16 4 C -0.14 0.45 4.04 -90.81 -0.37 0.08 16 5 H 0.11 -0.65 8.14 -51.93 -0.42 -1.07 16 6 C -0.13 0.36 7.45 -25.77 -0.19 0.17 16 7 C 0.12 -0.24 4.30 -67.10 -0.29 -0.53 16 8 H 0.11 0.02 7.50 -51.93 -0.39 -0.37 16 9 N -0.71 2.34 5.26 -53.00 -0.28 2.06 16 10 C 0.52 -0.07 7.91 -10.99 -0.09 -0.16 16 11 O -0.50 -2.57 16.12 -14.36 -0.23 -2.80 16 12 C 0.04 -0.09 5.22 36.00 0.19 0.09 16 13 O -0.27 -0.44 9.01 -39.36 -0.35 -0.80 16 14 C 0.16 0.12 6.68 -39.20 -0.26 -0.14 16 15 C -0.20 0.35 9.04 -39.44 -0.36 -0.01 16 16 C -0.03 0.05 9.68 -39.60 -0.38 -0.33 16 17 C -0.15 0.14 5.35 -104.60 -0.56 -0.42 16 18 C -0.07 0.09 2.80 36.01 0.10 0.19 16 19 O -0.53 0.02 12.83 -35.23 -0.45 -0.43 16 20 Si 0.68 -0.92 29.88 -169.99 -5.08 -6.00 16 21 C -0.05 0.00 8.40 -39.58 -0.33 -0.33 16 22 C -0.12 -0.19 6.24 -39.37 -0.25 -0.43 16 23 Br -0.02 -0.07 33.16 -68.01 -2.26 -2.32 16 24 C -0.12 0.27 7.15 -25.90 -0.19 0.09 16 25 H 0.40 -2.45 8.83 -40.82 -0.36 -2.81 16 26 H 0.40 -1.34 8.93 -40.82 -0.36 -1.70 16 27 H 0.10 -0.18 8.10 -51.93 -0.42 -0.60 16 28 H 0.08 -0.26 8.14 -51.93 -0.42 -0.68 16 29 H 0.40 -2.66 8.70 -40.82 -0.36 -3.02 16 30 H 0.10 -0.51 7.66 -51.93 -0.40 -0.91 16 31 H 0.10 -0.51 7.66 -51.93 -0.40 -0.91 16 32 H 0.14 -0.65 6.30 -52.48 -0.33 -0.98 16 33 H 0.14 -0.39 8.06 -52.49 -0.42 -0.81 16 34 H 0.12 -0.29 7.96 -51.93 -0.41 -0.70 16 35 H 0.38 -0.99 8.70 45.56 0.40 -0.60 16 36 H -0.25 -0.46 7.11 56.52 0.40 -0.06 16 37 H -0.26 -0.16 7.01 56.52 0.40 0.24 16 38 H 0.14 -0.16 4.84 -52.49 -0.25 -0.41 16 39 H 0.08 -0.27 8.14 -51.93 -0.42 -0.69 16 40 H 0.11 -0.04 7.43 -51.93 -0.39 -0.43 16 LS Contribution 362.94 15.07 5.47 5.47 Total: 0.00 -12.19 362.94 -10.43 -22.62 By element: Atomic # 1 Polarization: -11.95 SS G_CDS: -4.57 Total: -16.52 kcal Atomic # 6 Polarization: 1.15 SS G_CDS: -3.05 Total: -1.90 kcal Atomic # 7 Polarization: 5.10 SS G_CDS: 0.00 Total: 5.10 kcal Atomic # 8 Polarization: -5.50 SS G_CDS: -0.94 Total: -6.44 kcal Atomic # 14 Polarization: -0.92 SS G_CDS: -5.08 Total: -6.00 kcal Atomic # 35 Polarization: -0.07 SS G_CDS: -2.26 Total: -2.32 kcal Total LS contribution 5.47 Total: 5.47 kcal Total: -12.19 -10.43 -22.62 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_12220716_6201210.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -52.641 kcal (2) G-P(sol) polarization free energy of solvation -12.185 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -64.827 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.432 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.617 kcal (6) G-S(sol) free energy of system = (1) + (5) -75.259 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.76 seconds