Wall clock time and date at job start Thu Mar 4 2021 13:21:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34776 * 1 3 3 O 1.21281 * 119.99927 * 2 1 4 4 C 1.50699 * 119.99937 * 179.97438 * 2 1 3 5 5 H 1.08996 * 112.85359 * 311.20143 * 4 2 1 6 6 C 1.54057 * 113.61592 * 82.51257 * 4 2 1 7 7 C 1.53779 * 86.98475 * 139.97790 * 6 4 2 8 8 H 1.09005 * 113.61091 * 219.97647 * 7 6 4 9 9 N 1.46498 * 113.61663 * 89.16368 * 7 6 4 10 10 C 1.34774 * 120.00352 * 105.86349 * 9 7 6 11 11 O 1.21284 * 119.99908 * 359.97438 * 10 9 7 12 12 C 1.50694 * 120.00104 * 180.02562 * 10 9 7 13 13 O 1.42898 * 109.47501 * 179.97438 * 12 10 9 14 14 C 1.35908 * 117.00425 * 180.02562 * 13 12 10 15 15 C 1.38672 * 120.05986 * 359.97438 * 14 13 12 16 16 C 1.38195 * 119.95800 * 180.02562 * 15 14 13 17 17 C 1.38242 * 120.06829 * 359.97438 * 16 15 14 18 18 C 1.50701 * 119.93920 * 179.97438 * 17 16 15 19 19 O 1.42895 * 109.47234 * 64.99936 * 18 17 16 20 20 Si 1.86300 * 109.47028 * 185.00131 * 18 17 16 21 21 C 1.38285 * 120.11664 * 0.02562 * 17 16 15 22 22 C 1.38194 * 120.05147 * 359.97438 * 21 17 16 23 23 Br 1.89097 * 120.04138 * 180.02562 * 22 21 17 24 24 C 1.53785 * 113.61232 * 180.02562 * 4 2 1 25 25 H 0.97003 * 119.99934 * 180.02562 * 1 2 3 26 26 H 0.97002 * 120.00354 * 0.02562 * 1 2 3 27 27 H 1.08992 * 113.61313 * 25.47158 * 6 4 2 28 28 H 1.09002 * 113.69117 * 254.49042 * 6 4 2 29 29 H 0.96997 * 119.99426 * 285.85922 * 9 7 6 30 30 H 1.09001 * 109.47437 * 59.99431 * 12 10 9 31 31 H 1.09001 * 109.47519 * 299.99758 * 12 10 9 32 32 H 1.08004 * 120.02559 * 0.04926 * 15 14 13 33 33 H 1.07992 * 119.96619 * 179.72212 * 16 15 14 34 34 H 1.08998 * 109.46624 * 305.00037 * 18 17 16 35 35 H 0.96701 * 113.99849 * 59.99929 * 19 18 17 36 36 H 1.48495 * 109.99970 * 179.97438 * 20 18 17 37 37 H 1.48506 * 109.99992 * 301.31949 * 20 18 17 38 38 H 1.07999 * 119.97529 * 180.02562 * 21 17 16 39 39 H 1.08992 * 113.61485 * 105.47870 * 24 4 2 40 40 H 1.08996 * 113.61112 * 334.56832 * 24 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3478 0.0000 0.0000 3 8 1.9541 1.0503 0.0000 4 6 2.1012 -1.3051 0.0006 5 1 1.7399 -2.0022 0.7566 6 6 2.2505 -1.9322 -1.3987 7 6 3.6826 -2.3120 -0.9866 8 1 4.4152 -2.1816 -1.7831 9 7 3.7781 -3.6204 -0.3345 10 6 4.2958 -4.6702 -1.0026 11 8 4.6821 -4.5318 -2.1440 12 6 4.3935 -6.0161 -0.3320 13 8 4.9709 -6.9588 -1.2376 14 6 5.1300 -8.2307 -0.7859 15 6 4.7392 -8.5644 0.5021 16 6 4.9025 -9.8582 0.9594 17 6 5.4545 -10.8201 0.1340 18 6 5.6317 -12.2300 0.6359 19 8 4.3505 -12.8116 0.8850 20 14 6.5322 -13.2372 -0.6469 21 6 5.8453 -10.4906 -1.1509 22 6 5.6843 -9.1982 -1.6132 23 35 6.2181 -8.7481 -3.3705 24 6 3.6295 -1.1340 0.0011 25 1 -0.4850 -0.8401 0.0004 26 1 -0.4851 0.8400 -0.0004 27 1 2.2078 -1.2053 -2.2096 28 1 1.6014 -2.7920 -1.5648 29 1 3.4689 -3.7310 0.5782 30 1 3.3972 -6.3522 -0.0447 31 1 5.0197 -5.9348 0.5564 32 1 4.3071 -7.8138 1.1473 33 1 4.6023 -10.1172 1.9639 34 1 6.2105 -12.2167 1.5595 35 1 3.7804 -12.8558 0.1051 36 1 6.7139 -14.6295 -0.1637 37 1 5.7690 -13.2365 -1.9208 38 1 6.2759 -11.2439 -1.7938 39 1 4.0927 -1.3501 0.9638 40 1 3.9632 -0.1892 -0.4278 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_12220716_6201210.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:21:37 Heat of formation + Delta-G solvation = -81.703093 kcal Electronic energy + Delta-G solvation = -26100.932276 eV Core-core repulsion = 21929.900114 eV Total energy + Delta-G solvation = -4171.032162 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 385.040 amu Computer time = 0.87 seconds Orbital eigenvalues (eV) -41.85108 -41.41515 -40.40481 -39.24193 -38.39977 -37.30878 -34.70512 -34.33084 -33.47351 -32.12563 -30.51567 -29.64024 -27.18521 -26.77187 -26.27883 -24.09431 -22.62836 -22.20060 -21.84803 -20.32299 -19.52449 -18.77542 -18.36795 -18.10598 -17.73566 -17.48780 -17.18493 -16.79562 -16.42432 -16.22606 -16.06613 -15.77178 -15.62990 -15.31111 -15.23104 -14.79679 -14.51872 -14.29210 -14.02513 -13.95325 -13.58857 -13.37142 -13.32295 -12.93760 -12.40598 -12.34901 -12.17652 -11.85160 -11.77205 -11.72014 -11.61523 -11.18846 -11.02956 -10.92880 -10.66352 -10.62195 -10.18215 -9.97981 -9.30456 -4.94576 -0.01002 0.10313 0.65947 1.29109 1.38491 1.44006 1.56338 1.59341 1.92719 2.41367 2.47930 2.63958 3.36139 3.42761 3.42928 3.48261 3.54112 3.72472 3.80215 3.85700 3.92956 4.06068 4.10621 4.11093 4.27514 4.36353 4.51132 4.56050 4.69171 4.70956 4.76240 4.81569 4.86695 4.93078 5.05779 5.06440 5.32429 5.46370 5.51042 5.87953 6.07827 6.44984 6.47328 6.48564 7.14539 7.34434 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.839 5.839 2 C 0.519 3.481 3 O -0.597 6.597 4 C -0.126 4.126 5 H 0.152 0.848 6 C -0.128 4.128 7 C 0.121 3.879 8 H 0.083 0.917 9 N -0.689 5.689 10 C 0.515 3.485 11 O -0.566 6.566 12 C 0.034 3.966 13 O -0.305 6.305 14 C 0.151 3.849 15 C -0.194 4.194 16 C -0.032 4.032 17 C -0.149 4.149 18 C -0.061 4.061 19 O -0.543 6.543 20 Si 0.734 3.266 21 C -0.057 4.057 22 C -0.141 4.141 23 Br -0.052 7.052 24 C -0.120 4.120 25 H 0.418 0.582 26 H 0.404 0.596 27 H 0.083 0.917 28 H 0.094 0.906 29 H 0.424 0.576 30 H 0.133 0.867 31 H 0.132 0.868 32 H 0.176 0.824 33 H 0.157 0.843 34 H 0.138 0.862 35 H 0.386 0.614 36 H -0.297 1.297 37 H -0.287 1.287 38 H 0.144 0.856 39 H 0.098 0.902 40 H 0.087 0.913 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.581 -1.993 8.049 9.473 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.402 5.402 2 C 0.304 3.696 3 O -0.477 6.477 4 C -0.147 4.147 5 H 0.170 0.830 6 C -0.167 4.167 7 C 0.015 3.985 8 H 0.101 0.899 9 N -0.344 5.344 10 C 0.302 3.698 11 O -0.444 6.444 12 C -0.044 4.044 13 O -0.218 6.218 14 C 0.103 3.897 15 C -0.213 4.213 16 C -0.050 4.050 17 C -0.150 4.150 18 C -0.171 4.171 19 O -0.351 6.351 20 Si 0.641 3.359 21 C -0.077 4.077 22 C -0.221 4.221 23 Br 0.033 6.967 24 C -0.158 4.158 25 H 0.249 0.751 26 H 0.234 0.766 27 H 0.102 0.898 28 H 0.113 0.887 29 H 0.262 0.738 30 H 0.151 0.849 31 H 0.150 0.850 32 H 0.193 0.807 33 H 0.175 0.825 34 H 0.155 0.845 35 H 0.236 0.764 36 H -0.225 1.225 37 H -0.214 1.214 38 H 0.161 0.839 39 H 0.117 0.883 40 H 0.106 0.894 Dipole moment (debyes) X Y Z Total from point charges -3.311 -1.817 6.443 7.468 hybrid contribution -1.864 -0.003 0.227 1.878 sum -5.175 -1.819 6.670 8.636 Atomic orbital electron populations 1.43842 1.06569 1.13722 1.76049 1.20963 0.83359 0.91328 0.73919 1.90754 1.69460 1.35563 1.51970 1.22960 0.96181 0.94585 1.00999 0.82994 1.23338 0.97129 1.01031 0.95193 1.21717 0.97912 0.82376 0.96511 0.89919 1.45262 1.63367 1.07540 1.18212 1.20530 0.76805 0.86344 0.86166 1.90806 1.48600 1.84970 1.19994 1.22844 1.03080 0.85557 0.92890 1.86240 1.77436 1.16577 1.41505 1.18792 0.94529 0.83546 0.92809 1.21626 1.06146 0.99519 0.93982 1.21237 0.92617 0.90877 1.00302 1.20209 1.03605 0.97492 0.93704 1.24877 0.89826 0.92248 1.10178 1.86582 1.26368 1.82716 1.39437 0.94292 0.88229 0.78493 0.74874 1.20950 0.97181 0.93598 0.95932 1.21140 1.11820 0.95740 0.93418 1.96777 1.90196 1.94162 1.15527 1.23161 0.94110 0.97721 1.00820 0.75050 0.76571 0.89812 0.88723 0.73764 0.84924 0.85031 0.80709 0.82491 0.84480 0.76435 1.22515 1.21358 0.83917 0.88348 0.89440 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.84 6.18 8.87 -173.53 -1.54 4.64 16 2 C 0.52 -0.28 7.63 87.66 0.67 0.38 16 3 O -0.60 -6.35 16.74 -3.03 -0.05 -6.40 16 4 C -0.13 0.96 4.04 -10.92 -0.04 0.91 16 5 H 0.15 -2.31 8.14 -2.39 -0.02 -2.33 16 6 C -0.13 0.71 7.45 31.21 0.23 0.94 16 7 C 0.12 -0.43 4.30 45.53 0.20 -0.24 16 8 H 0.08 0.24 7.50 -2.38 -0.02 0.22 16 9 N -0.69 5.52 5.26 -439.98 -2.32 3.20 16 10 C 0.52 -0.42 7.91 87.66 0.69 0.28 16 11 O -0.57 -6.76 16.12 16.00 0.26 -6.50 16 12 C 0.03 -0.25 5.22 71.23 0.37 0.12 16 13 O -0.31 -0.83 9.01 -73.48 -0.66 -1.49 16 14 C 0.15 0.07 6.68 22.52 0.15 0.23 16 15 C -0.19 1.25 9.04 22.36 0.20 1.45 16 16 C -0.03 0.19 9.68 22.26 0.22 0.41 16 17 C -0.15 0.49 5.35 -19.85 -0.11 0.39 16 18 C -0.06 0.24 2.80 71.24 0.20 0.44 16 19 O -0.54 0.73 12.83 -148.98 -1.91 -1.19 16 20 Si 0.73 -1.56 29.88 68.60 2.05 0.49 16 21 C -0.06 0.00 8.40 22.27 0.19 0.19 16 22 C -0.14 -0.49 6.24 22.40 0.14 -0.35 16 23 Br -0.05 -0.39 33.16 -20.37 -0.68 -1.07 16 24 C -0.12 0.53 7.15 31.14 0.22 0.76 16 25 H 0.42 -5.90 8.83 -92.71 -0.82 -6.72 16 26 H 0.40 -2.86 8.93 -92.71 -0.83 -3.68 16 27 H 0.08 -0.18 8.10 -2.39 -0.02 -0.20 16 28 H 0.09 -0.74 8.14 -2.39 -0.02 -0.75 16 29 H 0.42 -7.00 8.70 -92.71 -0.81 -7.81 16 30 H 0.13 -1.95 7.66 -2.39 -0.02 -1.96 16 31 H 0.13 -1.86 7.66 -2.39 -0.02 -1.88 16 32 H 0.18 -2.52 6.30 -2.91 -0.02 -2.53 16 33 H 0.16 -1.52 8.06 -2.91 -0.02 -1.55 16 34 H 0.14 -0.95 7.96 -2.39 -0.02 -0.97 16 35 H 0.39 -2.33 8.70 -74.06 -0.64 -2.98 16 36 H -0.30 -1.58 7.11 99.48 0.71 -0.87 16 37 H -0.29 -0.79 7.01 99.48 0.70 -0.09 16 38 H 0.14 -0.18 4.84 -2.91 -0.01 -0.19 16 39 H 0.10 -0.77 8.14 -2.39 -0.02 -0.79 16 40 H 0.09 0.12 7.43 -2.39 -0.02 0.10 16 Total: 0.00 -33.94 362.94 -3.44 -37.38 By element: Atomic # 1 Polarization: -33.08 SS G_CDS: -1.92 Total: -34.99 kcal Atomic # 6 Polarization: 2.58 SS G_CDS: 3.33 Total: 5.91 kcal Atomic # 7 Polarization: 11.70 SS G_CDS: -3.86 Total: 7.85 kcal Atomic # 8 Polarization: -13.20 SS G_CDS: -2.37 Total: -15.57 kcal Atomic # 14 Polarization: -1.56 SS G_CDS: 2.05 Total: 0.49 kcal Atomic # 35 Polarization: -0.39 SS G_CDS: -0.68 Total: -1.07 kcal Total: -33.94 -3.44 -37.38 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_12220716_6201210.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -44.321 kcal (2) G-P(sol) polarization free energy of solvation -33.944 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -78.265 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.438 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.382 kcal (6) G-S(sol) free energy of system = (1) + (5) -81.703 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.87 seconds