Wall clock time and date at job start Thu Mar 4 2021 13:21:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42893 * 1 3 3 C 1.35966 * 116.99988 * 2 1 4 4 C 1.39453 * 120.11766 * 180.02562 * 3 2 1 5 5 O 1.34769 * 133.24544 * 0.02562 * 4 3 2 6 6 C 1.34936 * 110.84107 * 179.30066 * 5 4 3 7 7 C 1.46991 * 125.13765 * 180.10027 * 6 5 4 8 8 O 1.21656 * 119.99971 * 180.53668 * 7 6 5 9 9 N 1.34774 * 120.00183 * 0.54290 * 7 6 5 10 10 C 1.46505 * 120.00059 * 179.97438 * 9 7 6 11 11 H 1.09002 * 112.84783 * 334.66242 * 10 9 7 12 12 C 1.53776 * 113.61814 * 105.86101 * 10 9 7 13 13 C 1.54045 * 86.98602 * 89.15968 * 12 10 9 14 14 H 1.08999 * 113.61555 * 270.88425 * 13 12 10 15 15 C 1.50699 * 113.61823 * 139.97694 * 13 12 10 16 16 N 1.34784 * 119.99817 * 82.50842 * 15 13 12 17 17 O 1.21276 * 120.00411 * 262.50434 * 15 13 12 18 18 C 1.53780 * 113.61194 * 203.47091 * 10 9 7 19 19 C 1.35805 * 109.71780 * 0.57666 * 6 5 4 20 20 C 1.40617 * 119.13318 * 179.70942 * 4 3 2 21 21 C 1.39780 * 120.11690 * 0.50653 * 20 4 3 22 22 C 1.50696 * 120.09011 * 179.79244 * 21 20 4 23 23 O 1.42903 * 109.47131 * 284.71774 * 22 21 20 24 24 Si 1.86305 * 109.47185 * 164.72315 * 22 21 20 25 25 C 1.36629 * 119.81493 * 359.51673 * 21 20 4 26 26 C 1.38260 * 120.12281 * 0.02562 * 3 2 1 27 27 H 1.09000 * 109.47570 * 299.99403 * 1 2 3 28 28 H 1.09002 * 109.47129 * 59.99638 * 1 2 3 29 29 H 1.08998 * 109.47454 * 179.97438 * 1 2 3 30 30 H 0.97001 * 120.00351 * 359.97438 * 9 7 6 31 31 H 1.09003 * 113.61336 * 203.66799 * 12 10 9 32 32 H 1.09003 * 113.61222 * 334.56415 * 12 10 9 33 33 H 0.96995 * 119.99499 * 359.97438 * 16 15 13 34 34 H 0.97000 * 119.99851 * 180.02562 * 16 15 13 35 35 H 1.08995 * 113.61684 * 25.42604 * 18 10 9 36 36 H 1.09004 * 113.61385 * 156.25285 * 18 10 9 37 37 H 1.08006 * 126.95673 * 179.56044 * 19 6 5 38 38 H 1.08999 * 109.47358 * 44.72134 * 22 21 20 39 39 H 0.96700 * 114.00311 * 300.00591 * 23 22 21 40 40 H 1.48499 * 109.99670 * 58.67633 * 24 22 21 41 41 H 1.48497 * 110.00233 * 179.97438 * 24 22 21 42 42 H 1.07994 * 119.75354 * 180.25683 * 25 21 20 43 43 H 1.07999 * 119.65683 * 0.02562 * 26 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0462 1.2115 0.0000 4 6 3.4387 1.2873 -0.0005 5 8 4.4140 0.3573 -0.0016 6 6 5.6316 0.9386 -0.0171 7 6 6.9130 0.2183 -0.0246 8 8 7.9595 0.8387 -0.0289 9 7 6.9285 -1.1293 -0.0269 10 6 8.2056 -1.8472 -0.0350 11 1 9.0170 -1.2624 -0.4683 12 6 8.5613 -2.4870 1.3173 13 6 7.7961 -3.7344 0.8363 14 1 6.7340 -3.7163 1.0806 15 6 8.4622 -5.0332 1.2113 16 7 8.2776 -5.5550 2.4402 17 8 9.1643 -5.6089 0.4073 18 6 8.1062 -3.2747 -0.5981 19 6 5.4944 2.2897 -0.0141 20 6 4.0554 2.5510 -0.0068 21 6 3.2765 3.7116 -0.0016 22 6 3.9381 5.0656 -0.0036 23 8 4.4614 5.3419 1.2972 24 14 2.6861 6.3680 -0.4587 25 6 1.9136 3.6151 -0.0005 26 6 1.2957 2.3726 0.0005 27 1 -0.3634 0.5137 0.8900 28 1 -0.3633 0.5139 -0.8900 29 1 -0.3634 -1.0276 -0.0005 30 1 6.0941 -1.6240 -0.0232 31 1 9.6296 -2.6554 1.4531 32 1 8.0982 -1.9908 2.1703 33 1 7.7163 -5.0944 3.0833 34 1 8.7066 -6.3908 2.6817 35 1 7.2759 -3.4143 -1.2903 36 1 9.0500 -3.6577 -0.9862 37 1 6.2874 3.0230 -0.0172 38 1 4.7500 5.0722 -0.7308 39 1 3.7931 5.3518 1.9961 40 1 1.5583 6.3476 0.5071 41 1 3.3260 7.7080 -0.4636 42 1 1.3128 4.5125 -0.0008 43 1 0.2174 2.3120 0.0014 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_22_12220716_6672420.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:21:47 Heat of formation + Delta-G solvation = -72.603595 kcal Electronic energy + Delta-G solvation = -29950.065880 eV Core-core repulsion = 25544.111832 eV Total energy + Delta-G solvation = -4405.954048 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 347.129 amu Computer time = 0.94 seconds Orbital eigenvalues (eV) -43.69779 -41.71782 -40.80137 -40.19074 -39.15658 -38.50579 -37.11694 -34.69754 -34.35789 -33.59500 -31.94626 -31.00287 -28.82133 -27.57735 -26.88058 -26.35800 -25.01787 -23.98914 -22.36210 -22.04738 -21.70785 -20.36967 -19.89049 -19.07755 -18.67170 -18.41553 -17.86539 -17.80062 -17.69734 -17.08081 -16.99739 -16.68311 -16.29000 -16.22953 -15.94369 -15.82448 -15.58392 -15.30228 -14.85682 -14.67345 -14.57201 -14.45964 -14.11908 -13.71150 -13.51004 -13.48660 -13.42455 -13.34503 -12.93226 -12.65646 -12.38189 -12.16338 -11.90381 -11.72623 -11.69985 -11.44972 -10.97396 -10.87658 -10.69883 -10.63560 -10.29064 -9.80267 -9.02516 -5.01772 -0.62070 0.08943 0.67989 1.18771 1.26102 1.50221 1.59585 1.86442 1.90250 2.00999 2.01463 2.37377 2.51703 3.17474 3.25020 3.32400 3.34726 3.47934 3.57701 3.61170 3.75858 3.80341 3.84210 3.97345 4.05614 4.06063 4.08657 4.15013 4.42085 4.43866 4.44503 4.46735 4.60350 4.67854 4.70376 4.78840 4.81110 4.86551 4.95668 5.04228 5.20347 5.26781 5.37041 5.60228 5.76494 6.11622 6.28201 6.30542 6.36831 6.88967 7.25614 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.024 3.976 2 O -0.311 6.311 3 C 0.150 3.850 4 C 0.047 3.953 5 O -0.174 6.174 6 C -0.025 4.025 7 C 0.606 3.394 8 O -0.505 6.505 9 N -0.701 5.701 10 C 0.118 3.882 11 H 0.115 0.885 12 C -0.133 4.133 13 C -0.144 4.144 14 H 0.115 0.885 15 C 0.527 3.473 16 N -0.855 5.855 17 O -0.540 6.540 18 C -0.120 4.120 19 C -0.102 4.102 20 C -0.082 4.082 21 C -0.094 4.094 22 C -0.074 4.074 23 O -0.525 6.525 24 Si 0.692 3.308 25 C -0.096 4.096 26 C -0.177 4.177 27 H 0.060 0.940 28 H 0.061 0.939 29 H 0.105 0.895 30 H 0.409 0.591 31 H 0.100 0.900 32 H 0.082 0.918 33 H 0.402 0.598 34 H 0.402 0.598 35 H 0.082 0.918 36 H 0.114 0.886 37 H 0.175 0.825 38 H 0.119 0.881 39 H 0.375 0.625 40 H -0.258 1.258 41 H -0.255 1.255 42 H 0.140 0.860 43 H 0.148 0.852 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.888 -0.104 1.240 7.985 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.071 4.071 2 O -0.224 6.224 3 C 0.104 3.896 4 C -0.002 4.002 5 O -0.076 6.076 6 C -0.075 4.075 7 C 0.391 3.609 8 O -0.381 6.381 9 N -0.352 5.352 10 C 0.013 3.987 11 H 0.133 0.867 12 C -0.172 4.172 13 C -0.165 4.165 14 H 0.132 0.868 15 C 0.312 3.688 16 N -0.418 5.418 17 O -0.416 6.416 18 C -0.159 4.159 19 C -0.122 4.122 20 C -0.083 4.083 21 C -0.095 4.095 22 C -0.183 4.183 23 O -0.331 6.331 24 Si 0.593 3.407 25 C -0.114 4.114 26 C -0.196 4.196 27 H 0.078 0.922 28 H 0.080 0.920 29 H 0.124 0.876 30 H 0.245 0.755 31 H 0.119 0.881 32 H 0.101 0.899 33 H 0.230 0.770 34 H 0.233 0.767 35 H 0.101 0.899 36 H 0.132 0.868 37 H 0.192 0.808 38 H 0.137 0.863 39 H 0.223 0.777 40 H -0.183 1.183 41 H -0.180 1.180 42 H 0.158 0.842 43 H 0.165 0.835 Dipole moment (debyes) X Y Z Total from point charges -6.524 0.363 0.499 6.553 hybrid contribution -0.844 -0.581 1.796 2.068 sum -7.367 -0.218 2.296 7.720 Atomic orbital electron populations 1.23191 0.77290 1.04771 1.01811 1.86169 1.22177 1.25691 1.88372 1.17744 0.86498 0.85883 0.99432 1.18771 0.87428 0.86962 1.07010 1.84045 1.12653 1.34729 1.76155 1.21921 0.83829 0.92580 1.09194 1.16596 0.85465 0.82014 0.76788 1.90935 1.30300 1.67375 1.49477 1.45579 1.09710 1.05605 1.74303 1.21922 0.86578 0.93081 0.97081 0.86720 1.23415 1.01558 0.93828 0.98356 1.22931 1.01257 0.92542 0.99761 0.86751 1.20428 0.80561 0.86161 0.81692 1.43912 1.53963 1.28359 1.15543 1.90767 1.38956 1.61883 1.49996 1.23239 1.04953 0.92965 0.94720 1.22759 0.94789 0.94321 1.00339 1.19408 0.92612 0.92054 1.04229 1.19404 0.92812 0.94339 1.02939 1.25031 1.06861 0.97919 0.88514 1.86642 1.37577 1.92626 1.16277 0.94882 0.77539 0.77909 0.90383 1.20591 0.93494 0.97817 0.99477 1.20972 1.00376 0.90535 1.07727 0.92158 0.91997 0.87632 0.75549 0.88137 0.89885 0.76970 0.76720 0.89891 0.86772 0.80759 0.86316 0.77716 1.18321 1.17967 0.84232 0.83490 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.08 9.81 101.05 0.99 0.91 16 2 O -0.31 -0.25 10.50 -19.63 -0.21 -0.45 16 3 C 0.15 0.16 6.70 -39.12 -0.26 -0.10 16 4 C 0.05 0.12 7.35 -38.23 -0.28 -0.17 16 5 O -0.17 -0.43 10.28 2.65 0.03 -0.41 16 6 C -0.03 -0.06 7.07 -36.91 -0.26 -0.32 16 7 C 0.61 1.45 7.80 -12.72 -0.10 1.35 16 8 O -0.51 -2.70 16.44 5.23 0.09 -2.61 16 9 N -0.70 0.27 5.26 -54.23 -0.29 -0.01 16 10 C 0.12 -0.08 4.29 -67.12 -0.29 -0.37 16 11 H 0.11 0.07 7.50 -51.93 -0.39 -0.32 16 12 C -0.13 0.22 7.45 -25.78 -0.19 0.02 16 13 C -0.14 0.25 4.04 -90.82 -0.37 -0.11 16 14 H 0.11 -0.42 8.14 -51.93 -0.42 -0.85 16 15 C 0.53 0.39 7.63 -10.98 -0.08 0.30 16 16 N -0.85 2.01 8.87 31.22 0.28 2.29 16 17 O -0.54 -2.89 16.74 5.56 0.09 -2.80 16 18 C -0.12 0.12 7.14 -25.92 -0.19 -0.06 16 19 C -0.10 -0.24 10.68 -37.24 -0.40 -0.64 16 20 C -0.08 -0.16 6.16 -105.20 -0.65 -0.81 16 21 C -0.09 -0.02 5.26 -104.63 -0.55 -0.57 16 22 C -0.07 0.03 2.71 36.00 0.10 0.13 16 23 O -0.53 -0.56 12.88 -35.23 -0.45 -1.02 16 24 Si 0.69 -1.20 30.25 -169.99 -5.14 -6.35 16 25 C -0.10 0.11 8.62 -39.97 -0.34 -0.23 16 26 C -0.18 0.20 9.03 -39.38 -0.36 -0.16 16 27 H 0.06 -0.26 7.66 -51.93 -0.40 -0.66 16 28 H 0.06 -0.27 7.66 -51.93 -0.40 -0.67 16 29 H 0.11 -0.48 8.14 -51.93 -0.42 -0.90 16 30 H 0.41 -0.85 8.42 -40.82 -0.34 -1.19 16 31 H 0.10 -0.13 8.10 -51.93 -0.42 -0.55 16 32 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 33 H 0.40 -2.04 8.83 -40.82 -0.36 -2.40 16 34 H 0.40 -1.05 8.93 -40.82 -0.36 -1.42 16 35 H 0.08 -0.14 8.14 -51.93 -0.42 -0.56 16 36 H 0.11 0.04 7.44 -51.93 -0.39 -0.34 16 37 H 0.18 0.31 8.06 -52.48 -0.42 -0.11 16 38 H 0.12 -0.09 7.96 -51.93 -0.41 -0.51 16 39 H 0.38 -0.72 8.70 45.56 0.40 -0.32 16 40 H -0.26 0.15 6.69 56.52 0.38 0.52 16 41 H -0.25 -0.44 7.11 56.52 0.40 -0.04 16 42 H 0.14 -0.43 4.81 -52.49 -0.25 -0.68 16 43 H 0.15 -0.56 6.26 -52.49 -0.33 -0.89 16 LS Contribution 369.65 15.07 5.57 5.57 Total: 0.00 -10.82 369.65 -8.25 -19.07 By element: Atomic # 1 Polarization: -7.47 SS G_CDS: -4.99 Total: -12.46 kcal Atomic # 6 Polarization: 2.41 SS G_CDS: -3.23 Total: -0.81 kcal Atomic # 7 Polarization: 2.28 SS G_CDS: -0.01 Total: 2.27 kcal Atomic # 8 Polarization: -6.83 SS G_CDS: -0.45 Total: -7.29 kcal Atomic # 14 Polarization: -1.20 SS G_CDS: -5.14 Total: -6.35 kcal Total LS contribution 5.57 Total: 5.57 kcal Total: -10.82 -8.25 -19.07 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_12220716_6672420.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -53.535 kcal (2) G-P(sol) polarization free energy of solvation -10.816 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -64.350 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.253 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.069 kcal (6) G-S(sol) free energy of system = (1) + (5) -72.604 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.94 seconds