Wall clock time and date at job start Thu Mar 4 2021 13:21:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50702 * 1 3 3 C 1.33820 * 122.45109 * 2 1 4 4 C 1.50699 * 124.52333 * 0.02562 * 3 2 1 5 5 O 1.42901 * 109.46830 * 330.00205 * 4 3 2 6 6 Si 1.86298 * 109.46950 * 210.00643 * 4 3 2 7 7 S 1.70617 * 110.95092 * 180.28707 * 3 2 1 8 8 C 1.75826 * 91.56623 * 359.65704 * 7 3 2 9 9 C 1.46582 * 125.45689 * 180.08681 * 8 7 3 10 10 O 1.21706 * 119.99746 * 180.29118 * 9 8 7 11 11 N 1.34776 * 120.00191 * 0.28938 * 9 8 7 12 12 C 1.46504 * 119.99889 * 179.97438 * 11 9 8 13 13 H 1.08998 * 112.85117 * 336.20348 * 12 11 9 14 14 C 1.53778 * 113.61082 * 107.50662 * 12 11 9 15 15 C 1.53774 * 87.08298 * 89.11500 * 14 12 11 16 16 H 1.08997 * 113.61687 * 270.88430 * 15 14 12 17 17 C 1.50700 * 113.69277 * 139.99317 * 15 14 12 18 18 N 1.34776 * 120.00090 * 82.46324 * 17 15 14 19 19 O 1.21283 * 119.99556 * 262.46760 * 17 15 14 20 20 C 1.53775 * 113.61264 * 204.99960 * 12 11 9 21 21 C 1.36647 * 109.08177 * 0.33609 * 8 7 3 22 22 H 1.08995 * 109.46974 * 89.99765 * 1 2 3 23 23 H 1.09002 * 109.47338 * 210.00391 * 1 2 3 24 24 H 1.09003 * 109.46900 * 330.00364 * 1 2 3 25 25 H 1.08991 * 109.47351 * 90.00353 * 4 3 2 26 26 H 0.96708 * 114.00246 * 299.99864 * 5 4 3 27 27 H 1.48506 * 109.99834 * 180.02562 * 6 4 3 28 28 H 1.48502 * 110.00011 * 301.31529 * 6 4 3 29 29 H 0.96990 * 119.99958 * 0.02562 * 11 9 8 30 30 H 1.08999 * 113.61341 * 203.66797 * 14 12 11 31 31 H 1.09004 * 113.61727 * 334.56238 * 14 12 11 32 32 H 0.96998 * 119.99904 * 0.02562 * 18 17 15 33 33 H 0.97004 * 119.99544 * 180.02562 * 18 17 15 34 34 H 1.08994 * 113.61622 * 25.44150 * 20 12 11 35 35 H 1.09003 * 113.61103 * 156.25316 * 20 12 11 36 36 H 1.08004 * 123.34825 * 179.74565 * 21 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2251 1.1292 0.0000 4 6 1.6356 2.5162 0.0006 5 8 0.3752 2.4983 -0.6726 6 14 2.7923 3.6828 -0.8780 7 16 3.8970 0.7891 -0.0080 8 6 3.5937 -0.9428 -0.0008 9 6 4.6231 -1.9863 -0.0013 10 8 4.3001 -3.1597 -0.0013 11 7 5.9273 -1.6464 -0.0017 12 6 6.9561 -2.6894 -0.0016 13 1 6.5991 -3.6360 0.4041 14 6 7.6901 -2.8307 -1.3455 15 6 8.6822 -1.7775 -0.8248 16 1 8.3887 -0.7522 -1.0498 17 6 10.1169 -2.0675 -1.1834 18 7 10.5909 -1.7233 -2.3972 19 8 10.8449 -2.6107 -0.3797 20 6 8.2979 -2.2310 0.5934 21 6 2.2446 -1.1601 -0.0004 22 1 -0.3633 0.0000 -1.0276 23 1 -0.3634 -0.8899 0.5139 24 1 -0.3633 0.8901 0.5138 25 1 1.4939 2.8503 1.0283 26 1 0.4256 2.2100 -1.5943 27 1 2.2226 5.0542 -0.8838 28 1 4.1168 3.6864 -0.2065 29 1 6.1847 -0.7113 -0.0013 30 1 8.1364 -3.8133 -1.4980 31 1 7.1042 -2.4936 -2.2006 32 1 10.0088 -1.2886 -3.0398 33 1 11.5144 -1.9103 -2.6281 34 1 8.2028 -1.4098 1.3037 35 1 8.9099 -3.0496 0.9724 36 1 1.8019 -2.1452 -0.0004 There are 51 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 51 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_12220716_6739946.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:21:49 Heat of formation + Delta-G solvation = -53.175029 kcal Electronic energy + Delta-G solvation = -21285.716423 eV Core-core repulsion = 17863.573772 eV Total energy + Delta-G solvation = -3422.142651 eV No. of doubly occupied orbitals = 51 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 297.087 amu Computer time = 0.61 seconds Orbital eigenvalues (eV) -41.76339 -40.64707 -39.82804 -38.54175 -37.25072 -34.72450 -34.37144 -32.05241 -30.19785 -27.86558 -26.79515 -26.11995 -24.48960 -22.32563 -22.00855 -20.46714 -20.00873 -19.53657 -18.43501 -17.80027 -17.67796 -17.23967 -16.91379 -16.45361 -16.27105 -16.10258 -15.73080 -15.43876 -15.25774 -14.63348 -14.56834 -14.40102 -13.94069 -13.69512 -13.47004 -13.39709 -13.09777 -12.97492 -12.90484 -12.42743 -12.23469 -11.80238 -11.76409 -11.66515 -11.29789 -10.95083 -10.66891 -10.65590 -10.29044 -9.67468 -9.41245 -5.05403 -0.67672 0.27429 0.69409 1.11741 1.32919 1.55608 1.57496 1.87715 1.91790 2.03867 2.61957 3.32498 3.38151 3.40129 3.58605 3.67437 3.74895 3.89520 4.10517 4.24970 4.27444 4.45988 4.52372 4.60555 4.67675 4.71781 4.81150 4.85858 4.90239 4.92792 5.01229 5.03286 5.40618 5.42755 5.49251 5.87794 6.28495 6.46371 6.68657 6.97706 7.33736 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.093 4.093 2 C -0.100 4.100 3 C -0.234 4.234 4 C -0.033 4.033 5 O -0.540 6.540 6 Si 0.732 3.268 7 S 0.241 5.759 8 C -0.283 4.283 9 C 0.594 3.406 10 O -0.568 6.568 11 N -0.695 5.695 12 C 0.117 3.883 13 H 0.092 0.908 14 C -0.124 4.124 15 C -0.130 4.130 16 H 0.147 0.853 17 C 0.522 3.478 18 N -0.838 5.838 19 O -0.596 6.596 20 C -0.122 4.122 21 C -0.054 4.054 22 H 0.085 0.915 23 H 0.059 0.941 24 H 0.079 0.921 25 H 0.121 0.879 26 H 0.396 0.604 27 H -0.276 1.276 28 H -0.252 1.252 29 H 0.412 0.588 30 H 0.091 0.909 31 H 0.096 0.904 32 H 0.419 0.581 33 H 0.405 0.595 34 H 0.091 0.909 35 H 0.094 0.906 36 H 0.146 0.854 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.562 6.192 -6.147 8.743 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.151 4.151 2 C -0.112 4.112 3 C -0.354 4.354 4 C -0.145 4.145 5 O -0.348 6.348 6 Si 0.634 3.366 7 S 0.509 5.491 8 C -0.403 4.403 9 C 0.382 3.618 10 O -0.448 6.448 11 N -0.346 5.346 12 C 0.012 3.988 13 H 0.110 0.890 14 C -0.163 4.163 15 C -0.151 4.151 16 H 0.164 0.836 17 C 0.307 3.693 18 N -0.401 5.401 19 O -0.476 6.476 20 C -0.161 4.161 21 C -0.088 4.088 22 H 0.104 0.896 23 H 0.078 0.922 24 H 0.098 0.902 25 H 0.138 0.862 26 H 0.246 0.754 27 H -0.202 1.202 28 H -0.178 1.178 29 H 0.249 0.751 30 H 0.110 0.890 31 H 0.114 0.886 32 H 0.250 0.750 33 H 0.235 0.765 34 H 0.110 0.890 35 H 0.112 0.888 36 H 0.164 0.836 Dipole moment (debyes) X Y Z Total from point charges 1.167 6.861 -4.914 8.519 hybrid contribution -1.199 -0.893 0.307 1.526 sum -0.033 5.968 -4.607 7.540 Atomic orbital electron populations 1.20629 0.87983 1.02919 1.03576 1.18758 0.98938 0.90262 1.03233 1.24685 0.98852 1.01191 1.10656 1.24626 0.92673 0.94881 1.02318 1.86514 1.27600 1.90090 1.30586 0.94010 0.75959 0.77652 0.88940 1.82745 1.02519 0.95743 1.68044 1.24497 0.97617 0.98306 1.19895 1.17162 0.82329 0.87102 0.75238 1.90844 1.82255 1.20054 1.51662 1.45387 1.04178 1.10376 1.74686 1.21819 0.87115 0.92005 0.97883 0.89005 1.23292 0.95853 0.99148 0.98026 1.22901 0.90447 1.03071 0.98677 0.83566 1.20845 0.90083 0.76596 0.81753 1.43818 1.17112 1.63051 1.16086 1.90752 1.60798 1.44866 1.51211 1.23188 0.94098 1.02920 0.95870 1.20811 0.91305 1.00354 0.96368 0.89647 0.92243 0.90225 0.86187 0.75359 1.20165 1.17761 0.75106 0.89007 0.88558 0.75004 0.76461 0.89015 0.88781 0.83617 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 0.23 8.67 71.24 0.62 0.85 16 2 C -0.10 0.07 5.75 -21.05 -0.12 -0.05 16 3 C -0.23 0.71 5.54 24.68 0.14 0.85 16 4 C -0.03 0.16 2.76 71.24 0.20 0.35 16 5 O -0.54 2.62 9.85 -148.98 -1.47 1.16 16 6 Si 0.73 -4.70 31.31 68.60 2.15 -2.55 16 7 S 0.24 -1.06 19.77 -56.49 -1.12 -2.18 16 8 C -0.28 -0.45 6.45 24.08 0.16 -0.29 16 9 C 0.59 2.85 7.78 86.42 0.67 3.53 16 10 O -0.57 -7.62 16.44 -4.37 -0.07 -7.69 16 11 N -0.70 1.30 5.26 -444.09 -2.34 -1.04 16 12 C 0.12 -0.10 4.32 45.51 0.20 0.09 16 13 H 0.09 0.37 7.46 -2.39 -0.02 0.36 16 14 C -0.12 0.52 7.43 31.12 0.23 0.75 16 15 C -0.13 0.69 4.02 -11.02 -0.04 0.65 16 16 H 0.15 -1.74 8.14 -2.39 -0.02 -1.76 16 17 C 0.52 0.27 7.63 87.66 0.67 0.94 16 18 N -0.84 5.57 8.87 -173.53 -1.54 4.03 16 19 O -0.60 -6.81 16.74 -3.04 -0.05 -6.86 16 20 C -0.12 0.23 7.15 31.12 0.22 0.46 16 21 C -0.05 -0.13 9.80 21.72 0.21 0.08 16 22 H 0.08 -0.45 8.14 -2.39 -0.02 -0.47 16 23 H 0.06 -0.11 8.13 -2.39 -0.02 -0.13 16 24 H 0.08 -0.09 6.41 -2.39 -0.02 -0.11 16 25 H 0.12 -0.47 7.96 -2.39 -0.02 -0.49 16 26 H 0.40 -4.74 8.66 -74.05 -0.64 -5.38 16 27 H -0.28 -0.19 7.11 99.48 0.71 0.51 16 28 H -0.25 0.98 7.09 99.48 0.71 1.68 16 29 H 0.41 -3.09 7.81 -92.72 -0.72 -3.81 16 30 H 0.09 -0.20 8.10 -2.39 -0.02 -0.22 16 31 H 0.10 -0.62 8.14 -2.38 -0.02 -0.64 16 32 H 0.42 -5.59 8.83 -92.71 -0.82 -6.41 16 33 H 0.40 -2.69 8.93 -92.71 -0.83 -3.52 16 34 H 0.09 -0.38 8.14 -2.39 -0.02 -0.40 16 35 H 0.09 0.25 7.44 -2.39 -0.02 0.23 16 36 H 0.15 0.53 8.06 -2.91 -0.02 0.50 16 Total: 0.00 -23.88 320.12 -3.10 -26.98 By element: Atomic # 1 Polarization: -18.25 SS G_CDS: -1.81 Total: -20.06 kcal Atomic # 6 Polarization: 5.07 SS G_CDS: 3.15 Total: 8.21 kcal Atomic # 7 Polarization: 6.87 SS G_CDS: -3.87 Total: 2.99 kcal Atomic # 8 Polarization: -11.80 SS G_CDS: -1.59 Total: -13.39 kcal Atomic # 14 Polarization: -4.70 SS G_CDS: 2.15 Total: -2.55 kcal Atomic # 16 Polarization: -1.06 SS G_CDS: -1.12 Total: -2.18 kcal Total: -23.88 -3.10 -26.98 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_12220716_6739946.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -26.196 kcal (2) G-P(sol) polarization free energy of solvation -23.881 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -50.077 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.098 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.979 kcal (6) G-S(sol) free energy of system = (1) + (5) -53.175 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.61 seconds