Wall clock time and date at job start Thu Mar 4 2021 13:21:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34777 * 1 3 3 O 1.21283 * 119.99596 * 2 1 4 4 C 1.50701 * 120.00329 * 180.02562 * 2 1 3 5 5 H 1.09002 * 112.85047 * 50.33216 * 4 2 1 6 6 C 1.53781 * 113.61772 * 181.52930 * 4 2 1 7 7 C 1.53777 * 87.08336 * 140.06093 * 6 4 2 8 8 H 1.08996 * 113.61474 * 220.01758 * 7 6 4 9 9 N 1.46500 * 113.61088 * 89.11940 * 7 6 4 10 10 C 1.34772 * 120.00149 * 155.00452 * 9 7 6 11 11 O 1.21640 * 119.99862 * 359.97438 * 10 9 7 12 12 C 1.47188 * 120.00123 * 179.97438 * 10 9 7 13 13 C 1.36009 * 123.46416 * 0.02562 * 12 10 9 14 14 S 1.70447 * 110.81785 * 179.97438 * 13 12 10 15 15 C 1.75499 * 92.44434 * 359.97438 * 14 13 12 16 16 C 1.50708 * 124.70744 * 179.97438 * 15 14 13 17 17 O 1.42900 * 109.46750 * 245.02512 * 16 15 14 18 18 Si 1.86298 * 109.47070 * 5.02430 * 16 15 14 19 19 C 1.32767 * 110.57802 * 359.73945 * 15 14 13 20 20 C 1.53775 * 87.07992 * 334.56762 * 7 6 4 21 21 H 0.97005 * 119.99336 * 179.97438 * 1 2 3 22 22 H 0.96998 * 120.00375 * 359.97438 * 1 2 3 23 23 H 1.08997 * 113.61673 * 254.61641 * 6 4 2 24 24 H 1.09009 * 113.61202 * 25.42872 * 6 4 2 25 25 H 0.96999 * 119.99703 * 334.99353 * 9 7 6 26 26 H 1.08001 * 124.58333 * 359.97379 * 13 12 10 27 27 H 1.08998 * 109.46935 * 125.02930 * 16 15 14 28 28 H 0.96692 * 114.00211 * 60.00216 * 17 16 15 29 29 H 1.48500 * 109.99834 * 58.68215 * 18 16 15 30 30 H 1.48507 * 109.99562 * 179.97438 * 18 16 15 31 31 H 1.08007 * 123.45782 * 180.22913 * 19 15 14 32 32 H 1.08993 * 113.61636 * 270.87622 * 20 7 6 33 33 H 1.09008 * 113.61006 * 139.97865 * 20 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3478 0.0000 0.0000 3 8 1.9541 1.0504 0.0000 4 6 2.1014 -1.3051 -0.0006 5 1 1.7577 -1.9919 -0.7741 6 6 3.6292 -1.1343 0.0371 7 6 3.6598 -2.3267 1.0076 8 1 4.3728 -2.2076 1.8234 9 7 3.7706 -3.6252 0.3385 10 6 4.3013 -4.6773 0.9926 11 8 4.6887 -4.5486 2.1384 12 6 4.4122 -5.9821 0.3205 13 6 4.0025 -6.2047 -0.9572 14 16 4.2817 -7.8243 -1.4093 15 6 4.9689 -8.2215 0.1559 16 6 5.4867 -9.5822 0.5453 17 8 4.6765 -10.1181 1.5934 18 14 5.4230 -10.7168 -0.9309 19 6 4.9737 -7.1557 0.9475 20 6 2.2183 -1.9516 1.3898 21 1 -0.4849 -0.8401 -0.0004 22 1 -0.4850 0.8400 0.0004 23 1 4.1148 -1.3358 -0.9177 24 1 3.9526 -0.1953 0.4866 25 1 3.4619 -3.7278 -0.5753 26 1 3.5603 -5.4566 -1.5984 27 1 6.5165 -9.4936 0.8914 28 1 3.7454 -10.2246 1.3554 29 1 6.2361 -10.1545 -2.0391 30 1 5.9317 -12.0618 -0.5601 31 1 5.3548 -7.1662 1.9581 32 1 2.1560 -1.2370 2.2104 33 1 1.5647 -2.8132 1.5270 There are 48 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 48 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_12220716_6894386.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:21:51 Heat of formation + Delta-G solvation = -52.563706 kcal Electronic energy + Delta-G solvation = -19319.715279 eV Core-core repulsion = 16053.136755 eV Total energy + Delta-G solvation = -3266.578523 eV No. of doubly occupied orbitals = 48 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 283.071 amu Computer time = 0.53 seconds Orbital eigenvalues (eV) -41.76986 -40.62467 -39.01610 -38.38042 -37.07862 -34.71569 -34.33078 -31.65921 -27.65918 -26.92852 -26.77903 -25.48244 -22.45753 -22.08965 -20.59971 -20.35401 -18.87081 -18.60379 -18.01538 -17.73225 -17.57987 -16.82989 -16.33688 -16.17783 -16.06378 -15.60596 -15.38196 -15.17080 -14.62801 -14.38813 -14.12708 -13.79997 -13.66884 -13.51858 -13.31607 -12.94503 -12.61122 -12.29845 -11.93324 -11.76700 -11.63611 -11.08773 -10.94000 -10.67016 -10.57144 -10.23708 -9.98094 -9.41894 -5.13341 -0.32183 0.41252 0.71247 0.82694 1.23547 1.57904 1.61696 1.91838 2.00492 2.24134 2.62298 3.34515 3.40974 3.42230 3.66670 3.72503 3.87955 3.92680 3.99870 4.25941 4.29234 4.41960 4.55153 4.69380 4.72376 4.75879 4.85055 4.91423 5.00576 5.06445 5.18173 5.48869 5.87568 6.44206 6.46478 6.70732 7.13511 7.33677 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.838 5.838 2 C 0.520 3.480 3 O -0.596 6.596 4 C -0.126 4.126 5 H 0.150 0.850 6 C -0.121 4.121 7 C 0.118 3.882 8 H 0.085 0.915 9 N -0.690 5.690 10 C 0.579 3.421 11 O -0.583 6.583 12 C -0.184 4.184 13 C -0.186 4.186 14 S 0.255 5.745 15 C -0.251 4.251 16 C -0.039 4.039 17 O -0.553 6.553 18 Si 0.744 3.256 19 C -0.077 4.077 20 C -0.126 4.126 21 H 0.418 0.582 22 H 0.404 0.596 23 H 0.094 0.906 24 H 0.089 0.911 25 H 0.417 0.583 26 H 0.209 0.791 27 H 0.112 0.888 28 H 0.397 0.603 29 H -0.256 1.256 30 H -0.276 1.276 31 H 0.129 0.871 32 H 0.087 0.913 33 H 0.094 0.906 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.420 -4.198 -7.636 11.445 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.401 5.401 2 C 0.306 3.694 3 O -0.477 6.477 4 C -0.147 4.147 5 H 0.168 0.832 6 C -0.159 4.159 7 C 0.012 3.988 8 H 0.103 0.897 9 N -0.342 5.342 10 C 0.366 3.634 11 O -0.464 6.464 12 C -0.202 4.202 13 C -0.325 4.325 14 S 0.522 5.478 15 C -0.367 4.367 16 C -0.150 4.150 17 O -0.361 6.361 18 Si 0.646 3.354 19 C -0.106 4.106 20 C -0.165 4.165 21 H 0.250 0.750 22 H 0.235 0.765 23 H 0.113 0.887 24 H 0.108 0.892 25 H 0.256 0.744 26 H 0.225 0.775 27 H 0.129 0.871 28 H 0.247 0.753 29 H -0.182 1.182 30 H -0.201 1.201 31 H 0.147 0.853 32 H 0.106 0.894 33 H 0.113 0.887 Dipole moment (debyes) X Y Z Total from point charges -5.870 -4.870 -8.401 11.347 hybrid contribution 0.194 1.498 1.786 2.339 sum -5.676 -3.372 -6.615 9.346 Atomic orbital electron populations 1.43826 1.06505 1.13751 1.76029 1.20901 0.83374 0.91192 0.73926 1.90753 1.69478 1.35499 1.51975 1.22890 0.96102 0.94594 1.01146 0.83205 1.23167 0.94300 0.97645 1.00798 1.21752 0.98097 0.82475 0.96505 0.89728 1.45293 1.62721 1.08364 1.17775 1.17922 0.76274 0.84059 0.85118 1.90808 1.50776 1.85130 1.19731 1.20025 1.10199 0.94421 0.95515 1.26211 1.03253 1.04549 0.98468 1.82884 1.54027 1.00575 1.10334 1.24886 1.11230 1.00701 0.99925 1.24700 0.96474 0.93025 1.00838 1.86508 1.25374 1.84665 1.39556 0.94218 0.89587 0.77070 0.74515 1.20987 0.98749 0.90451 1.00448 1.23291 0.96908 1.00968 0.95365 0.75032 0.76503 0.88720 0.89213 0.74438 0.77460 0.87087 0.75274 1.18177 1.20136 0.85302 0.89442 0.88731 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.84 5.65 8.87 -173.53 -1.54 4.11 16 2 C 0.52 0.17 7.63 87.66 0.67 0.83 16 3 O -0.60 -6.79 16.75 -3.04 -0.05 -6.84 16 4 C -0.13 0.76 4.02 -11.01 -0.04 0.71 16 5 H 0.15 -1.99 8.14 -2.39 -0.02 -2.01 16 6 C -0.12 0.29 7.14 31.12 0.22 0.52 16 7 C 0.12 -0.12 4.32 45.51 0.20 0.08 16 8 H 0.08 0.43 7.46 -2.39 -0.02 0.41 16 9 N -0.69 2.27 5.23 -443.54 -2.32 -0.05 16 10 C 0.58 2.76 7.79 86.59 0.67 3.43 16 11 O -0.58 -8.80 16.40 -4.16 -0.07 -8.87 16 12 C -0.18 -0.15 5.98 -19.87 -0.12 -0.27 16 13 C -0.19 1.35 10.38 67.30 0.70 2.04 16 14 S 0.26 -1.90 20.20 -56.49 -1.14 -3.04 16 15 C -0.25 0.30 5.65 24.51 0.14 0.44 16 16 C -0.04 0.05 2.94 71.24 0.21 0.26 16 17 O -0.55 -0.09 12.88 -148.98 -1.92 -2.00 16 18 Si 0.74 -3.32 30.92 68.60 2.12 -1.20 16 19 C -0.08 -0.29 9.95 22.67 0.23 -0.06 16 20 C -0.13 0.51 7.43 31.12 0.23 0.74 16 21 H 0.42 -5.62 8.83 -92.70 -0.82 -6.44 16 22 H 0.40 -2.69 8.93 -92.71 -0.83 -3.51 16 23 H 0.09 -0.50 8.14 -2.39 -0.02 -0.52 16 24 H 0.09 0.24 7.45 -2.38 -0.02 0.23 16 25 H 0.42 -4.63 7.20 -92.71 -0.67 -5.30 16 26 H 0.21 -3.22 7.01 -2.91 -0.02 -3.24 16 27 H 0.11 0.06 7.96 -2.39 -0.02 0.04 16 28 H 0.40 -3.42 8.70 -74.06 -0.64 -4.06 16 29 H -0.26 0.33 7.11 99.48 0.71 1.04 16 30 H -0.28 -0.72 7.11 99.48 0.71 -0.01 16 31 H 0.13 1.07 8.06 -2.91 -0.02 1.05 16 32 H 0.09 -0.13 8.10 -2.39 -0.02 -0.15 16 33 H 0.09 -0.58 8.14 -2.38 -0.02 -0.60 16 Total: 0.00 -28.71 302.83 -3.53 -32.24 By element: Atomic # 1 Polarization: -21.37 SS G_CDS: -1.72 Total: -23.09 kcal Atomic # 6 Polarization: 5.63 SS G_CDS: 3.10 Total: 8.73 kcal Atomic # 7 Polarization: 7.92 SS G_CDS: -3.86 Total: 4.06 kcal Atomic # 8 Polarization: -15.68 SS G_CDS: -2.04 Total: -17.71 kcal Atomic # 14 Polarization: -3.32 SS G_CDS: 2.12 Total: -1.20 kcal Atomic # 16 Polarization: -1.90 SS G_CDS: -1.14 Total: -3.04 kcal Total: -28.71 -3.53 -32.24 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_12220716_6894386.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -20.320 kcal (2) G-P(sol) polarization free energy of solvation -28.708 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -49.029 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.535 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.243 kcal (6) G-S(sol) free energy of system = (1) + (5) -52.564 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.53 seconds