Wall clock time and date at job start Thu Mar 4 2021 13:21:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50693 * 1 3 3 C 1.37941 * 120.07791 * 2 1 4 4 C 1.38374 * 120.14874 * 179.97438 * 3 2 1 5 5 C 1.50694 * 119.85545 * 179.97438 * 4 3 2 6 6 C 1.38337 * 120.29376 * 0.02608 * 4 3 2 7 7 C 1.50701 * 119.93139 * 179.97438 * 6 4 3 8 8 O 1.42906 * 109.46666 * 285.01812 * 7 6 4 9 9 Si 1.86300 * 109.47293 * 165.01855 * 7 6 4 10 10 C 1.37982 * 120.14612 * 359.97438 * 6 4 3 11 11 C 1.39565 * 119.84714 * 0.28082 * 10 6 4 12 12 C 1.47850 * 120.13961 * 179.71780 * 11 10 6 13 13 O 1.21552 * 119.99873 * 186.22131 * 12 11 10 14 14 N 1.34778 * 120.00116 * 6.23209 * 12 11 10 15 15 C 1.46499 * 119.99683 * 179.97438 * 14 12 11 16 16 H 1.08997 * 112.84994 * 336.19345 * 15 14 12 17 17 C 1.53779 * 113.61211 * 107.50034 * 15 14 12 18 18 C 1.53779 * 87.08433 * 89.11263 * 17 15 14 19 19 H 1.08994 * 113.61728 * 270.88364 * 18 17 15 20 20 C 1.50700 * 113.69269 * 139.98547 * 18 17 15 21 21 N 1.34779 * 119.99643 * 82.47381 * 20 18 17 22 22 O 1.21281 * 120.00399 * 262.46554 * 20 18 17 23 23 C 1.53785 * 113.61178 * 204.99465 * 15 14 12 24 24 H 1.08997 * 109.47176 * 96.57507 * 1 2 3 25 25 H 1.08998 * 109.47883 * 216.57645 * 1 2 3 26 26 H 1.09000 * 109.47226 * 336.57752 * 1 2 3 27 27 H 1.08003 * 119.92135 * 359.97438 * 3 2 1 28 28 H 1.09001 * 109.47812 * 270.02423 * 5 4 3 29 29 H 1.09001 * 109.47224 * 30.02983 * 5 4 3 30 30 H 1.09007 * 109.47211 * 150.02503 * 5 4 3 31 31 H 1.09001 * 109.47198 * 45.01361 * 7 6 4 32 32 H 0.96700 * 113.99782 * 299.99531 * 8 7 6 33 33 H 1.48501 * 109.99547 * 179.97438 * 9 7 6 34 34 H 1.48501 * 109.99858 * 301.31453 * 9 7 6 35 35 H 1.08001 * 120.07788 * 180.02562 * 10 6 4 36 36 H 0.96999 * 119.99929 * 359.97438 * 14 12 11 37 37 H 1.09001 * 113.61556 * 203.66245 * 17 15 14 38 38 H 1.09000 * 113.61684 * 334.56523 * 17 15 14 39 39 H 0.97001 * 120.00420 * 359.97438 * 21 20 18 40 40 H 0.96999 * 120.00216 * 180.02562 * 21 20 18 41 41 H 1.08998 * 113.61120 * 25.43591 * 23 15 14 42 42 H 1.09002 * 113.61388 * 156.33855 * 23 15 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 6 2.1983 1.1937 0.0000 4 6 3.5820 1.1954 0.0005 5 6 4.3306 2.5032 -0.0001 6 6 4.2813 0.0018 0.0005 7 6 5.7883 0.0132 0.0005 8 8 6.2618 0.3659 -1.3008 9 14 6.4221 -1.6788 0.4546 10 6 3.6021 -1.1993 0.0005 11 6 2.2064 -1.2080 -0.0054 12 6 1.4721 -2.4912 -0.0118 13 8 0.2625 -2.4987 -0.1310 14 7 2.1439 -3.6528 0.1149 15 6 1.4161 -4.9242 0.1091 16 1 0.3737 -4.8165 0.4087 17 6 1.6073 -5.7375 -1.1819 18 6 2.8293 -6.3789 -0.5037 19 1 3.7571 -5.8307 -0.6670 20 6 2.9666 -7.8551 -0.7740 21 7 3.5418 -8.2804 -1.9163 22 8 2.5596 -8.6605 0.0363 23 6 2.1530 -6.0591 0.8399 24 1 -0.3633 -0.1177 -1.0209 25 1 -0.3635 -0.8252 0.6123 26 1 -0.3634 0.9430 0.4085 27 1 1.6582 2.1290 -0.0004 28 1 4.5111 2.8182 -1.0278 29 1 3.7387 3.2609 0.5135 30 1 5.2835 2.3767 0.5139 31 1 6.1461 0.7424 0.7274 32 1 5.9811 -0.2410 -1.9994 33 1 7.9071 -1.6808 0.4575 34 1 5.9106 -2.0706 1.7925 35 1 4.1491 -2.1305 0.0009 36 1 3.1092 -3.6469 0.2098 37 1 0.7980 -6.4407 -1.3788 38 1 1.8594 -5.1273 -2.0491 39 1 3.8671 -7.6363 -2.5646 40 1 3.6299 -9.2305 -2.0905 41 1 2.8457 -5.7083 1.6049 42 1 1.4930 -6.8502 1.1957 There are 56 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 56 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_22_12220716_9599494.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:21:58 Heat of formation + Delta-G solvation = -56.506223 kcal Electronic energy + Delta-G solvation = -25179.723023 eV Core-core repulsion = 21512.746055 eV Total energy + Delta-G solvation = -3666.976968 eV No. of doubly occupied orbitals = 56 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 305.146 amu Computer time = 0.68 seconds Orbital eigenvalues (eV) -41.96990 -41.20802 -39.96489 -38.55857 -37.62745 -34.85379 -34.58551 -34.42313 -33.03126 -29.42220 -28.72388 -27.23081 -26.86957 -25.63173 -23.80980 -23.01106 -22.03968 -21.06837 -20.29914 -19.21715 -18.49018 -17.85560 -17.51939 -17.38581 -16.68293 -16.50204 -16.30165 -16.24941 -15.92500 -15.58493 -15.40658 -14.99265 -14.76092 -14.60979 -14.46123 -14.15448 -13.95240 -13.63234 -13.53768 -13.35442 -13.13014 -12.94854 -12.75663 -12.69366 -12.55602 -12.15949 -11.90537 -11.84787 -11.71031 -10.87943 -10.71277 -10.66614 -10.54053 -10.18439 -9.94144 -9.64105 -5.24830 -0.26758 0.12326 1.13131 1.48169 1.58438 1.75576 1.84454 1.95274 2.50366 2.62981 3.25449 3.31060 3.33515 3.41517 3.50254 3.61724 3.66302 3.74556 3.78095 4.05842 4.08434 4.11566 4.35140 4.45650 4.46634 4.48706 4.60764 4.66319 4.67521 4.70385 4.73120 4.79980 4.84844 4.91233 4.98377 5.01045 5.04539 5.26710 5.42803 5.47040 5.54725 5.75124 5.76903 6.29260 6.36487 6.44277 7.13792 7.24495 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.124 4.124 2 C -0.007 4.007 3 C -0.132 4.132 4 C -0.024 4.024 5 C -0.121 4.121 6 C -0.138 4.138 7 C -0.064 4.064 8 O -0.536 6.536 9 Si 0.671 3.329 10 C -0.071 4.071 11 C -0.146 4.146 12 C 0.564 3.436 13 O -0.522 6.522 14 N -0.712 5.712 15 C 0.121 3.879 16 H 0.113 0.887 17 C -0.132 4.132 18 C -0.143 4.143 19 H 0.115 0.885 20 C 0.526 3.474 21 N -0.855 5.855 22 O -0.540 6.540 23 C -0.123 4.123 24 H 0.079 0.921 25 H 0.096 0.904 26 H 0.060 0.940 27 H 0.133 0.867 28 H 0.082 0.918 29 H 0.069 0.931 30 H 0.071 0.929 31 H 0.116 0.884 32 H 0.378 0.622 33 H -0.250 1.250 34 H -0.252 1.252 35 H 0.126 0.874 36 H 0.399 0.601 37 H 0.098 0.902 38 H 0.083 0.917 39 H 0.402 0.598 40 H 0.402 0.598 41 H 0.081 0.919 42 H 0.112 0.888 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.007 1.070 -3.724 4.905 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.180 4.180 2 C -0.008 4.008 3 C -0.150 4.150 4 C -0.024 4.024 5 C -0.177 4.177 6 C -0.139 4.139 7 C -0.175 4.175 8 O -0.341 6.341 9 Si 0.572 3.428 10 C -0.089 4.089 11 C -0.149 4.149 12 C 0.353 3.647 13 O -0.399 6.399 14 N -0.364 5.364 15 C 0.015 3.985 16 H 0.131 0.869 17 C -0.171 4.171 18 C -0.165 4.165 19 H 0.133 0.867 20 C 0.311 3.689 21 N -0.418 5.418 22 O -0.417 6.417 23 C -0.162 4.162 24 H 0.097 0.903 25 H 0.114 0.886 26 H 0.079 0.921 27 H 0.151 0.849 28 H 0.101 0.899 29 H 0.088 0.912 30 H 0.090 0.910 31 H 0.133 0.867 32 H 0.226 0.774 33 H -0.175 1.175 34 H -0.177 1.177 35 H 0.143 0.857 36 H 0.234 0.766 37 H 0.116 0.884 38 H 0.101 0.899 39 H 0.230 0.770 40 H 0.233 0.767 41 H 0.099 0.901 42 H 0.130 0.870 Dipole moment (debyes) X Y Z Total from point charges 2.554 0.698 -2.250 3.474 hybrid contribution 0.749 0.456 -0.285 0.922 sum 3.303 1.153 -2.535 4.321 Atomic orbital electron populations 1.21125 0.89595 1.03360 1.03934 1.20100 0.97053 0.91222 0.92430 1.21051 0.93357 0.97936 1.02672 1.20001 0.93449 0.95174 0.93775 1.20929 1.00061 0.93375 1.03384 1.20048 0.96164 0.92821 1.04823 1.25007 0.91606 1.11564 0.89333 1.86526 1.75803 1.55763 1.16033 0.95301 0.81604 0.80432 0.85479 1.20973 0.93061 0.96815 0.98055 1.19594 0.92961 0.93185 1.09183 1.18224 0.87101 0.83429 0.75991 1.90765 1.13586 1.86956 1.48617 1.45616 1.10617 1.05159 1.75028 1.21836 0.98145 0.82145 0.96328 0.86941 1.23361 0.96700 0.98882 0.98204 1.22884 1.00558 0.92839 1.00204 0.86741 1.20452 0.76338 0.91008 0.81116 1.43914 1.63724 1.12098 1.22051 1.90772 1.48341 1.56394 1.46145 1.23267 0.99858 0.97831 0.95223 0.90257 0.88563 0.92104 0.84892 0.89942 0.91244 0.91010 0.86653 0.77444 1.17476 1.17650 0.85655 0.76582 0.88387 0.89872 0.76953 0.76737 0.90083 0.86987 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -0.13 8.72 36.00 0.31 0.18 16 2 C -0.01 -0.01 5.91 -104.23 -0.62 -0.62 16 3 C -0.13 -0.01 9.31 -39.64 -0.37 -0.38 16 4 C -0.02 0.00 5.89 -104.54 -0.62 -0.61 16 5 C -0.12 0.14 9.53 36.00 0.34 0.49 16 6 C -0.14 0.13 5.26 -104.68 -0.55 -0.42 16 7 C -0.06 0.10 2.04 36.01 0.07 0.18 16 8 O -0.54 0.71 12.80 -35.23 -0.45 0.26 16 9 Si 0.67 -1.72 29.91 -169.99 -5.08 -6.80 16 10 C -0.07 0.11 8.13 -39.18 -0.32 -0.20 16 11 C -0.15 -0.06 5.87 -104.96 -0.62 -0.67 16 12 C 0.56 0.58 7.70 -12.33 -0.09 0.49 16 13 O -0.52 -2.12 12.96 5.32 0.07 -2.05 16 14 N -0.71 1.32 5.21 -53.96 -0.28 1.03 16 15 C 0.12 -0.18 4.32 -67.12 -0.29 -0.47 16 16 H 0.11 0.03 7.46 -51.93 -0.39 -0.36 16 17 C -0.13 0.35 7.43 -25.92 -0.19 0.15 16 18 C -0.14 0.42 4.02 -90.96 -0.37 0.05 16 19 H 0.11 -0.64 8.14 -51.93 -0.42 -1.06 16 20 C 0.53 -0.05 7.63 -10.98 -0.08 -0.14 16 21 N -0.85 2.78 8.87 31.22 0.28 3.06 16 22 O -0.54 -2.60 16.74 5.56 0.09 -2.50 16 23 C -0.12 0.21 7.15 -25.91 -0.19 0.02 16 24 H 0.08 0.10 8.14 -51.93 -0.42 -0.32 16 25 H 0.10 0.26 5.89 -51.93 -0.31 -0.05 16 26 H 0.06 -0.02 8.04 -51.93 -0.42 -0.43 16 27 H 0.13 -0.18 8.06 -52.48 -0.42 -0.60 16 28 H 0.08 -0.09 8.14 -51.93 -0.42 -0.52 16 29 H 0.07 -0.13 8.08 -51.93 -0.42 -0.55 16 30 H 0.07 -0.08 6.22 -51.93 -0.32 -0.40 16 31 H 0.12 -0.13 6.48 -51.93 -0.34 -0.47 16 32 H 0.38 -1.91 8.70 45.56 0.40 -1.51 16 33 H -0.25 -0.22 7.11 56.52 0.40 0.18 16 34 H -0.25 0.04 7.11 56.52 0.40 0.44 16 35 H 0.13 -0.58 3.52 -52.49 -0.18 -0.76 16 36 H 0.40 -1.75 6.77 -40.82 -0.28 -2.03 16 37 H 0.10 -0.18 8.10 -51.93 -0.42 -0.60 16 38 H 0.08 -0.27 8.14 -51.93 -0.42 -0.70 16 39 H 0.40 -2.51 8.83 -40.82 -0.36 -2.87 16 40 H 0.40 -1.34 8.93 -40.82 -0.36 -1.71 16 41 H 0.08 -0.19 8.14 -51.93 -0.42 -0.62 16 42 H 0.11 0.00 7.43 -51.93 -0.39 -0.38 16 LS Contribution 342.83 15.07 5.17 5.17 Total: 0.00 -9.82 342.83 -9.30 -19.12 By element: Atomic # 1 Polarization: -9.80 SS G_CDS: -5.52 Total: -15.32 kcal Atomic # 6 Polarization: 1.60 SS G_CDS: -3.57 Total: -1.97 kcal Atomic # 7 Polarization: 4.10 SS G_CDS: 0.00 Total: 4.10 kcal Atomic # 8 Polarization: -4.01 SS G_CDS: -0.29 Total: -4.29 kcal Atomic # 14 Polarization: -1.72 SS G_CDS: -5.08 Total: -6.80 kcal Total LS contribution 5.17 Total: 5.17 kcal Total: -9.82 -9.30 -19.12 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_12220716_9599494.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -37.387 kcal (2) G-P(sol) polarization free energy of solvation -9.819 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -47.207 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.300 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.119 kcal (6) G-S(sol) free energy of system = (1) + (5) -56.506 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.68 seconds