Wall clock time and date at job start Thu Mar 4 2021 13:21:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50693 * 1 3 3 C 1.37941 * 120.07791 * 2 1 4 4 C 1.38374 * 120.14874 * 179.97438 * 3 2 1 5 5 C 1.50694 * 119.85545 * 179.97438 * 4 3 2 6 6 C 1.38337 * 120.29376 * 0.02608 * 4 3 2 7 7 C 1.50701 * 119.93139 * 179.97438 * 6 4 3 8 8 O 1.42906 * 109.46666 * 285.01812 * 7 6 4 9 9 Si 1.86300 * 109.47293 * 165.01855 * 7 6 4 10 10 C 1.37982 * 120.14612 * 359.97438 * 6 4 3 11 11 C 1.39565 * 119.84714 * 0.28082 * 10 6 4 12 12 C 1.47850 * 120.13961 * 179.71780 * 11 10 6 13 13 O 1.21552 * 119.99873 * 186.22131 * 12 11 10 14 14 N 1.34778 * 120.00116 * 6.23209 * 12 11 10 15 15 C 1.46499 * 119.99683 * 179.97438 * 14 12 11 16 16 H 1.08997 * 112.84994 * 336.19345 * 15 14 12 17 17 C 1.53779 * 113.61211 * 107.50034 * 15 14 12 18 18 C 1.53779 * 87.08433 * 89.11263 * 17 15 14 19 19 H 1.08994 * 113.61728 * 270.88364 * 18 17 15 20 20 C 1.50700 * 113.69269 * 139.98547 * 18 17 15 21 21 N 1.34779 * 119.99643 * 82.47381 * 20 18 17 22 22 O 1.21281 * 120.00399 * 262.46554 * 20 18 17 23 23 C 1.53785 * 113.61178 * 204.99465 * 15 14 12 24 24 H 1.08997 * 109.47176 * 96.57507 * 1 2 3 25 25 H 1.08998 * 109.47883 * 216.57645 * 1 2 3 26 26 H 1.09000 * 109.47226 * 336.57752 * 1 2 3 27 27 H 1.08003 * 119.92135 * 359.97438 * 3 2 1 28 28 H 1.09001 * 109.47812 * 270.02423 * 5 4 3 29 29 H 1.09001 * 109.47224 * 30.02983 * 5 4 3 30 30 H 1.09007 * 109.47211 * 150.02503 * 5 4 3 31 31 H 1.09001 * 109.47198 * 45.01361 * 7 6 4 32 32 H 0.96700 * 113.99782 * 299.99531 * 8 7 6 33 33 H 1.48501 * 109.99547 * 179.97438 * 9 7 6 34 34 H 1.48501 * 109.99858 * 301.31453 * 9 7 6 35 35 H 1.08001 * 120.07788 * 180.02562 * 10 6 4 36 36 H 0.96999 * 119.99929 * 359.97438 * 14 12 11 37 37 H 1.09001 * 113.61556 * 203.66245 * 17 15 14 38 38 H 1.09000 * 113.61684 * 334.56523 * 17 15 14 39 39 H 0.97001 * 120.00420 * 359.97438 * 21 20 18 40 40 H 0.96999 * 120.00216 * 180.02562 * 21 20 18 41 41 H 1.08998 * 113.61120 * 25.43591 * 23 15 14 42 42 H 1.09002 * 113.61388 * 156.33855 * 23 15 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 6 2.1983 1.1937 0.0000 4 6 3.5820 1.1954 0.0005 5 6 4.3306 2.5032 -0.0001 6 6 4.2813 0.0018 0.0005 7 6 5.7883 0.0132 0.0005 8 8 6.2618 0.3659 -1.3008 9 14 6.4221 -1.6788 0.4546 10 6 3.6021 -1.1993 0.0005 11 6 2.2064 -1.2080 -0.0054 12 6 1.4721 -2.4912 -0.0118 13 8 0.2625 -2.4987 -0.1310 14 7 2.1439 -3.6528 0.1149 15 6 1.4161 -4.9242 0.1091 16 1 0.3737 -4.8165 0.4087 17 6 1.6073 -5.7375 -1.1819 18 6 2.8293 -6.3789 -0.5037 19 1 3.7571 -5.8307 -0.6670 20 6 2.9666 -7.8551 -0.7740 21 7 3.5418 -8.2804 -1.9163 22 8 2.5596 -8.6605 0.0363 23 6 2.1530 -6.0591 0.8399 24 1 -0.3633 -0.1177 -1.0209 25 1 -0.3635 -0.8252 0.6123 26 1 -0.3634 0.9430 0.4085 27 1 1.6582 2.1290 -0.0004 28 1 4.5111 2.8182 -1.0278 29 1 3.7387 3.2609 0.5135 30 1 5.2835 2.3767 0.5139 31 1 6.1461 0.7424 0.7274 32 1 5.9811 -0.2410 -1.9994 33 1 7.9071 -1.6808 0.4575 34 1 5.9106 -2.0706 1.7925 35 1 4.1491 -2.1305 0.0009 36 1 3.1092 -3.6469 0.2098 37 1 0.7980 -6.4407 -1.3788 38 1 1.8594 -5.1273 -2.0491 39 1 3.8671 -7.6363 -2.5646 40 1 3.6299 -9.2305 -2.0905 41 1 2.8457 -5.7083 1.6049 42 1 1.4930 -6.8502 1.1957 There are 56 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 56 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_12220716_9599494.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:21:57 Heat of formation + Delta-G solvation = -60.164790 kcal Electronic energy + Delta-G solvation = -25179.881670 eV Core-core repulsion = 21512.746055 eV Total energy + Delta-G solvation = -3667.135615 eV No. of doubly occupied orbitals = 56 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 305.146 amu Computer time = 0.76 seconds Orbital eigenvalues (eV) -41.92759 -41.14514 -39.96293 -38.53729 -37.52843 -34.84621 -34.50886 -34.37982 -32.95686 -29.38327 -28.67107 -27.11583 -26.71396 -25.56063 -23.74773 -22.95205 -21.98806 -21.03302 -20.18998 -19.13967 -18.35933 -17.74772 -17.41863 -17.33804 -16.58818 -16.42604 -16.23242 -16.20062 -15.87877 -15.52686 -15.35545 -14.97402 -14.70011 -14.55553 -14.40853 -14.10607 -13.90526 -13.55278 -13.48100 -13.27764 -13.06828 -12.90493 -12.74170 -12.64545 -12.47661 -12.13784 -11.81550 -11.68755 -11.57157 -10.89396 -10.72867 -10.61669 -10.40224 -10.16120 -9.88071 -9.60335 -5.06731 -0.24440 0.18528 1.30101 1.62655 1.64470 1.75503 1.99211 2.01309 2.65373 2.68573 3.40453 3.46153 3.47917 3.52394 3.65157 3.74913 3.79490 3.82524 3.97716 4.15824 4.20559 4.33049 4.46068 4.51543 4.57597 4.61454 4.68879 4.75703 4.77461 4.80495 4.81307 4.91412 4.92675 4.98448 5.04776 5.09753 5.14108 5.27520 5.48846 5.51005 5.57920 5.81047 5.92546 6.46919 6.52615 6.80216 7.16636 7.39465 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.119 4.119 2 C -0.025 4.025 3 C -0.138 4.138 4 C -0.032 4.032 5 C -0.120 4.120 6 C -0.140 4.140 7 C -0.072 4.072 8 O -0.550 6.550 9 Si 0.766 3.234 10 C -0.061 4.061 11 C -0.156 4.156 12 C 0.561 3.439 13 O -0.560 6.560 14 N -0.696 5.696 15 C 0.120 3.880 16 H 0.089 0.911 17 C -0.124 4.124 18 C -0.130 4.130 19 H 0.154 0.846 20 C 0.520 3.480 21 N -0.838 5.838 22 O -0.598 6.598 23 C -0.125 4.125 24 H 0.072 0.928 25 H 0.077 0.923 26 H 0.070 0.930 27 H 0.143 0.857 28 H 0.082 0.918 29 H 0.075 0.925 30 H 0.071 0.929 31 H 0.109 0.891 32 H 0.395 0.605 33 H -0.298 1.298 34 H -0.279 1.279 35 H 0.156 0.844 36 H 0.414 0.586 37 H 0.086 0.914 38 H 0.098 0.902 39 H 0.419 0.581 40 H 0.403 0.597 41 H 0.092 0.908 42 H 0.089 0.911 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.648 1.356 -4.626 6.697 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.175 4.175 2 C -0.026 4.026 3 C -0.156 4.156 4 C -0.033 4.033 5 C -0.176 4.176 6 C -0.140 4.140 7 C -0.182 4.182 8 O -0.358 6.358 9 Si 0.672 3.328 10 C -0.079 4.079 11 C -0.159 4.159 12 C 0.351 3.649 13 O -0.440 6.440 14 N -0.348 5.348 15 C 0.014 3.986 16 H 0.107 0.893 17 C -0.163 4.163 18 C -0.151 4.151 19 H 0.171 0.829 20 C 0.306 3.694 21 N -0.401 5.401 22 O -0.479 6.479 23 C -0.163 4.163 24 H 0.090 0.910 25 H 0.096 0.904 26 H 0.089 0.911 27 H 0.160 0.840 28 H 0.100 0.900 29 H 0.094 0.906 30 H 0.090 0.910 31 H 0.127 0.873 32 H 0.245 0.755 33 H -0.226 1.226 34 H -0.206 1.206 35 H 0.173 0.827 36 H 0.252 0.748 37 H 0.105 0.895 38 H 0.117 0.883 39 H 0.251 0.749 40 H 0.234 0.766 41 H 0.110 0.890 42 H 0.107 0.893 Dipole moment (debyes) X Y Z Total from point charges 4.225 0.994 -3.219 5.404 hybrid contribution 0.297 0.394 -0.018 0.493 sum 4.522 1.388 -3.236 5.731 Atomic orbital electron populations 1.21017 0.90212 1.03079 1.03172 1.20202 0.96906 0.92019 0.93443 1.21169 0.93674 0.98048 1.02710 1.20206 0.93466 0.95957 0.93645 1.20933 1.00041 0.93199 1.03440 1.20193 0.96563 0.92824 1.04447 1.25176 0.91086 1.12470 0.89427 1.86497 1.75935 1.56835 1.16525 0.94269 0.77551 0.78095 0.82934 1.21179 0.92255 0.97886 0.96595 1.19639 0.93788 0.92632 1.09890 1.18391 0.86727 0.84223 0.75593 1.90756 1.15215 1.87471 1.50541 1.45444 1.11282 1.04227 1.73836 1.21753 0.97156 0.82322 0.97367 0.89278 1.23280 0.96559 0.98397 0.98088 1.22948 1.01916 0.91368 0.98872 0.82862 1.20925 0.75629 0.91768 0.81072 1.43831 1.62151 1.12758 1.21372 1.90751 1.51004 1.57956 1.48197 1.23199 0.99861 0.96957 0.96329 0.90974 0.90441 0.91071 0.83967 0.89963 0.90576 0.91038 0.87329 0.75525 1.22585 1.20572 0.82714 0.74765 0.89513 0.88343 0.74934 0.76596 0.88981 0.89251 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -0.43 8.72 71.23 0.62 0.19 16 2 C -0.02 -0.06 5.91 -19.61 -0.12 -0.18 16 3 C -0.14 -0.03 9.31 22.23 0.21 0.18 16 4 C -0.03 0.03 5.89 -19.81 -0.12 -0.09 16 5 C -0.12 0.33 9.53 71.23 0.68 1.01 16 6 C -0.14 0.42 5.26 -19.90 -0.10 0.32 16 7 C -0.07 0.32 2.04 71.24 0.15 0.46 16 8 O -0.55 2.23 12.80 -148.98 -1.91 0.33 16 9 Si 0.77 -5.17 29.91 68.60 2.05 -3.11 16 10 C -0.06 0.29 8.13 22.53 0.18 0.47 16 11 C -0.16 -0.08 5.87 -20.09 -0.12 -0.20 16 12 C 0.56 1.28 7.70 86.79 0.67 1.95 16 13 O -0.56 -5.42 12.96 -3.88 -0.05 -5.47 16 14 N -0.70 3.16 5.21 -442.90 -2.31 0.85 16 15 C 0.12 -0.33 4.32 45.52 0.20 -0.14 16 16 H 0.09 0.22 7.46 -2.39 -0.02 0.20 16 17 C -0.12 0.73 7.43 31.12 0.23 0.96 16 18 C -0.13 0.92 4.02 -11.01 -0.04 0.88 16 19 H 0.15 -2.28 8.14 -2.39 -0.02 -2.30 16 20 C 0.52 -0.28 7.63 87.66 0.67 0.39 16 21 N -0.84 6.42 8.87 -173.53 -1.54 4.88 16 22 O -0.60 -6.46 16.74 -3.03 -0.05 -6.51 16 23 C -0.12 0.41 7.15 31.12 0.22 0.63 16 24 H 0.07 0.32 8.14 -2.39 -0.02 0.30 16 25 H 0.08 0.59 5.89 -2.39 -0.01 0.58 16 26 H 0.07 0.04 8.04 -2.39 -0.02 0.02 16 27 H 0.14 -0.37 8.06 -2.91 -0.02 -0.39 16 28 H 0.08 -0.22 8.14 -2.39 -0.02 -0.24 16 29 H 0.08 -0.32 8.08 -2.39 -0.02 -0.34 16 30 H 0.07 -0.19 6.22 -2.38 -0.01 -0.20 16 31 H 0.11 -0.33 6.48 -2.39 -0.02 -0.34 16 32 H 0.39 -4.77 8.70 -74.06 -0.64 -5.41 16 33 H -0.30 -0.44 7.11 99.48 0.71 0.27 16 34 H -0.28 0.56 7.11 99.48 0.71 1.27 16 35 H 0.16 -1.85 3.52 -2.91 -0.01 -1.86 16 36 H 0.41 -4.62 6.77 -92.71 -0.63 -5.24 16 37 H 0.09 -0.27 8.10 -2.39 -0.02 -0.29 16 38 H 0.10 -0.84 8.14 -2.39 -0.02 -0.86 16 39 H 0.42 -6.14 8.83 -92.71 -0.82 -6.96 16 40 H 0.40 -2.96 8.93 -92.71 -0.83 -3.78 16 41 H 0.09 -0.51 8.14 -2.39 -0.02 -0.53 16 42 H 0.09 0.17 7.43 -2.39 -0.02 0.15 16 Total: 0.00 -25.93 342.83 -2.25 -28.19 By element: Atomic # 1 Polarization: -24.20 SS G_CDS: -1.77 Total: -25.98 kcal Atomic # 6 Polarization: 3.51 SS G_CDS: 3.32 Total: 6.83 kcal Atomic # 7 Polarization: 9.57 SS G_CDS: -3.85 Total: 5.73 kcal Atomic # 8 Polarization: -9.64 SS G_CDS: -2.01 Total: -11.65 kcal Atomic # 14 Polarization: -5.17 SS G_CDS: 2.05 Total: -3.11 kcal Total: -25.93 -2.25 -28.19 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_12220716_9599494.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -31.976 kcal (2) G-P(sol) polarization free energy of solvation -25.934 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -57.910 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.255 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.189 kcal (6) G-S(sol) free energy of system = (1) + (5) -60.165 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.76 seconds