Wall clock time and date at job start Thu Mar 4 2021 13:22:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34777 * 1 3 3 O 1.21282 * 119.99804 * 2 1 4 4 C 1.50700 * 120.00503 * 179.97438 * 2 1 3 5 5 H 1.09005 * 112.84382 * 48.80571 * 4 2 1 6 6 C 1.53780 * 113.61482 * 179.97438 * 4 2 1 7 7 C 1.53778 * 87.07683 * 89.20301 * 6 4 2 8 8 H 1.09003 * 113.61539 * 270.79341 * 7 6 4 9 9 N 1.46504 * 113.61320 * 139.98073 * 7 6 4 10 10 C 1.34775 * 120.00056 * 154.99515 * 9 7 6 11 11 O 1.21282 * 119.99996 * 0.02562 * 10 9 7 12 12 C 1.50703 * 120.00333 * 179.97438 * 10 9 7 13 13 N 1.46499 * 109.47311 * 180.02562 * 12 10 9 14 14 C 1.36833 * 125.06197 * 265.00128 * 13 12 10 15 15 C 1.34232 * 109.93890 * 180.02562 * 14 13 12 16 16 C 1.50701 * 126.50328 * 179.97438 * 15 14 13 17 17 O 1.42899 * 109.46975 * 105.02359 * 16 15 14 18 18 Si 1.86299 * 109.46916 * 345.02603 * 16 15 14 19 19 C 1.46497 * 106.99890 * 359.97438 * 15 14 13 20 20 C 1.39586 * 134.03413 * 180.02562 * 19 15 14 21 21 C 1.36664 * 119.76595 * 180.02562 * 20 19 15 22 22 C 1.38793 * 120.52328 * 359.75017 * 21 20 19 23 23 C 1.37789 * 120.66875 * 0.51110 * 22 21 20 24 24 C 1.37685 * 125.06264 * 85.00489 * 13 12 10 25 25 C 1.53774 * 113.69346 * 277.53716 * 4 2 1 26 26 H 0.97000 * 119.99581 * 179.97438 * 1 2 3 27 27 H 0.96993 * 120.00230 * 0.02562 * 1 2 3 28 28 H 1.09001 * 113.61526 * 334.65303 * 6 4 2 29 29 H 1.09004 * 113.61230 * 203.75012 * 6 4 2 30 30 H 0.97001 * 119.99810 * 334.99717 * 9 7 6 31 31 H 1.09007 * 109.46594 * 59.99845 * 12 10 9 32 32 H 1.09004 * 109.47117 * 300.01111 * 12 10 9 33 33 H 1.07998 * 125.02824 * 359.97438 * 14 13 12 34 34 H 1.08994 * 109.47161 * 225.02554 * 16 15 14 35 35 H 0.96695 * 114.00039 * 180.02562 * 17 16 15 36 36 H 1.48504 * 109.99817 * 298.67779 * 18 16 15 37 37 H 1.48504 * 110.00145 * 59.99701 * 18 16 15 38 38 H 1.08001 * 120.12049 * 0.02562 * 20 19 15 39 39 H 1.07992 * 119.73997 * 179.97438 * 21 20 19 40 40 H 1.08000 * 119.66793 * 180.25694 * 22 21 20 41 41 H 1.08002 * 120.11439 * 179.77306 * 23 22 21 42 42 H 1.08992 * 113.61707 * 156.32113 * 25 4 2 43 43 H 1.09003 * 113.61401 * 25.41817 * 25 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3478 0.0000 0.0000 3 8 1.9541 1.0504 0.0000 4 6 2.1014 -1.3050 0.0006 5 1 1.7401 -2.0027 -0.7550 6 6 3.6296 -1.1339 -0.0001 7 6 3.5499 -1.1204 1.5355 8 1 3.4024 -0.1257 1.9564 9 7 4.6358 -1.8579 2.1860 10 6 5.0055 -1.5433 3.4433 11 8 4.4389 -0.6498 4.0364 12 6 6.1221 -2.3023 4.1128 13 7 6.3301 -1.7747 5.4635 14 6 7.2525 -0.8223 5.8020 15 6 7.1834 -0.5652 7.1176 16 6 8.0288 0.4188 7.8844 17 8 7.2503 1.5768 8.1928 18 14 9.4966 0.9148 6.8499 19 6 6.1302 -1.4227 7.6668 20 6 5.5989 -1.6098 8.9440 21 6 4.5912 -2.5133 9.1340 22 6 4.0881 -3.2430 8.0659 23 6 4.6015 -3.0780 6.7980 24 6 5.6267 -2.1633 6.5815 25 6 2.2504 -1.9319 1.3968 26 1 -0.4849 -0.8401 -0.0004 27 1 -0.4850 0.8400 -0.0004 28 1 3.9629 -0.1886 -0.4284 29 1 4.1651 -1.9941 -0.4020 30 1 5.0887 -2.5727 1.7118 31 1 7.0379 -2.1881 3.5326 32 1 5.8590 -3.3585 4.1720 33 1 7.9355 -0.3482 5.1127 34 1 8.3752 -0.0428 8.8090 35 1 7.7319 2.2544 8.6866 36 1 10.3316 -0.2759 6.5492 37 1 9.0376 1.5455 5.5863 38 1 5.9827 -1.0426 9.7790 39 1 4.1808 -2.6580 10.1223 40 1 3.2888 -3.9503 8.2311 41 1 4.2057 -3.6532 5.9740 42 1 2.4090 -3.0100 1.3767 43 1 1.4705 -1.6307 2.0962 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_12220716_9818708.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:22:00 Heat of formation + Delta-G solvation = -12.792347 kcal Electronic energy + Delta-G solvation = -27843.662671 eV Core-core repulsion = 23856.703087 eV Total energy + Delta-G solvation = -3986.959584 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 330.141 amu Computer time = 1.05 seconds Orbital eigenvalues (eV) -42.65954 -41.77900 -40.49454 -38.52343 -38.08044 -37.60600 -34.92998 -34.61584 -34.12073 -31.53849 -30.38213 -29.28278 -27.06813 -26.81183 -25.61251 -23.89918 -23.15930 -22.57102 -21.79473 -20.65773 -20.39261 -18.65159 -18.53989 -18.32667 -18.10282 -17.97523 -17.73905 -17.10379 -16.53846 -16.47565 -16.08036 -15.78363 -15.64635 -15.46324 -15.03986 -14.94011 -14.83300 -14.57885 -14.36664 -14.19862 -13.73807 -13.65197 -13.43784 -13.25928 -13.12920 -12.77633 -12.65892 -12.53067 -12.06764 -11.93778 -11.82001 -11.75856 -11.25744 -11.06758 -10.76908 -10.64371 -10.23703 -10.19510 -9.26684 -8.74596 -4.98155 0.03316 0.56256 1.23438 1.31113 1.31889 1.47522 1.57324 1.68118 1.97006 2.09268 2.48077 2.87290 3.30484 3.35607 3.44220 3.48776 3.60431 3.63909 3.69786 3.80739 3.82229 3.96693 3.99056 4.17344 4.20157 4.22063 4.33412 4.46943 4.51178 4.60567 4.62487 4.69954 4.72838 4.78417 4.82879 4.92583 5.00589 5.06476 5.38836 5.43601 5.57745 5.64681 5.65416 5.77776 6.03356 6.15084 6.36665 6.37997 6.97458 7.05026 7.24512 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.837 5.837 2 C 0.520 3.480 3 O -0.597 6.597 4 C -0.131 4.131 5 H 0.150 0.850 6 C -0.117 4.117 7 C 0.109 3.891 8 H 0.067 0.933 9 N -0.695 5.695 10 C 0.488 3.512 11 O -0.577 6.577 12 C 0.088 3.912 13 N -0.468 5.468 14 C 0.050 3.950 15 C -0.181 4.181 16 C -0.052 4.052 17 O -0.572 6.572 18 Si 0.788 3.212 19 C -0.121 4.121 20 C -0.083 4.083 21 C -0.151 4.151 22 C -0.101 4.101 23 C -0.136 4.136 24 C 0.090 3.910 25 C -0.119 4.119 26 H 0.420 0.580 27 H 0.405 0.595 28 H 0.062 0.938 29 H 0.136 0.864 30 H 0.425 0.575 31 H 0.155 0.845 32 H 0.154 0.846 33 H 0.173 0.827 34 H 0.081 0.919 35 H 0.398 0.602 36 H -0.279 1.279 37 H -0.298 1.298 38 H 0.127 0.873 39 H 0.144 0.856 40 H 0.152 0.848 41 H 0.136 0.864 42 H 0.133 0.867 43 H 0.062 0.938 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.000 -8.632 -3.547 9.385 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.400 5.400 2 C 0.305 3.695 3 O -0.477 6.477 4 C -0.152 4.152 5 H 0.168 0.832 6 C -0.156 4.156 7 C 0.004 3.996 8 H 0.085 0.915 9 N -0.349 5.349 10 C 0.273 3.727 11 O -0.456 6.456 12 C -0.037 4.037 13 N -0.151 5.151 14 C -0.075 4.075 15 C -0.188 4.188 16 C -0.161 4.161 17 O -0.381 6.381 18 Si 0.693 3.307 19 C -0.125 4.125 20 C -0.101 4.101 21 C -0.170 4.170 22 C -0.120 4.120 23 C -0.156 4.156 24 C -0.015 4.015 25 C -0.158 4.158 26 H 0.251 0.749 27 H 0.236 0.764 28 H 0.081 0.919 29 H 0.154 0.846 30 H 0.264 0.736 31 H 0.173 0.827 32 H 0.172 0.828 33 H 0.190 0.810 34 H 0.099 0.901 35 H 0.249 0.751 36 H -0.206 1.206 37 H -0.226 1.226 38 H 0.145 0.855 39 H 0.162 0.838 40 H 0.170 0.830 41 H 0.154 0.846 42 H 0.151 0.849 43 H 0.081 0.919 Dipole moment (debyes) X Y Z Total from point charges 1.068 -8.003 -4.517 9.252 hybrid contribution -0.967 0.004 -0.158 0.980 sum 0.101 -7.999 -4.675 9.266 Atomic orbital electron populations 1.43760 1.06371 1.13853 1.76008 1.20767 0.83541 0.91122 0.74026 1.90764 1.69488 1.35647 1.51847 1.22234 0.96668 0.94641 1.01697 0.83186 1.23274 0.94465 1.04497 0.93328 1.22560 0.87764 0.95729 0.93596 0.91468 1.45741 1.36961 1.38237 1.13934 1.21548 0.84730 0.83737 0.82639 1.90820 1.56523 1.33038 1.65183 1.22012 1.00149 1.00493 0.81019 1.43384 1.30387 1.34963 1.06371 1.21704 0.95830 0.94159 0.95827 1.20059 1.02374 1.03013 0.93356 1.24338 1.00653 0.86749 1.04322 1.86517 1.42859 1.29571 1.79146 0.94172 0.75953 0.82141 0.78483 1.19369 0.99308 0.99577 0.94285 1.20500 0.96610 0.98031 0.94984 1.20991 0.97934 0.97689 1.00396 1.21210 0.99764 0.99656 0.91390 1.20287 0.96652 0.99733 0.98918 1.18507 0.97176 0.99666 0.86126 1.23408 0.96477 1.02130 0.93819 0.74873 0.76415 0.91885 0.84637 0.73616 0.82699 0.82810 0.81039 0.90083 0.75128 1.20578 1.22585 0.85462 0.83781 0.83025 0.84586 0.84933 0.91878 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.84 3.23 8.87 -173.53 -1.54 1.69 16 2 C 0.52 1.73 7.36 87.66 0.65 2.38 16 3 O -0.60 -8.94 16.59 -3.03 -0.05 -8.99 16 4 C -0.13 0.65 4.34 -11.02 -0.05 0.60 16 5 H 0.15 -1.85 8.14 -2.38 -0.02 -1.87 16 6 C -0.12 0.41 7.20 31.12 0.22 0.63 16 7 C 0.11 0.14 3.89 45.53 0.18 0.32 16 8 H 0.07 0.86 7.40 -2.39 -0.02 0.85 16 9 N -0.70 2.28 5.35 -439.95 -2.36 -0.07 16 10 C 0.49 2.17 7.90 87.66 0.69 2.86 16 11 O -0.58 -10.48 16.02 -3.04 -0.05 -10.53 16 12 C 0.09 -0.18 6.48 85.63 0.55 0.38 16 13 N -0.47 -3.81 2.27 -519.98 -1.18 -4.99 16 14 C 0.05 0.52 9.89 83.00 0.82 1.34 16 15 C -0.18 -2.24 5.61 -18.62 -0.10 -2.34 16 16 C -0.05 -0.31 3.05 71.24 0.22 -0.09 16 17 O -0.57 -4.35 12.86 -148.98 -1.92 -6.26 16 18 Si 0.79 0.71 30.79 68.60 2.11 2.82 16 19 C -0.12 -1.70 6.35 -20.20 -0.13 -1.83 16 20 C -0.08 -0.90 10.05 22.23 0.22 -0.68 16 21 C -0.15 -1.06 9.97 22.03 0.22 -0.84 16 22 C -0.10 -0.56 10.01 22.30 0.22 -0.34 16 23 C -0.14 -0.98 10.00 22.37 0.22 -0.76 16 24 C 0.09 1.04 6.80 39.03 0.27 1.30 16 25 C -0.12 0.59 7.47 31.14 0.23 0.82 16 26 H 0.42 -4.66 8.83 -92.71 -0.82 -5.48 16 27 H 0.41 -1.47 8.93 -92.71 -0.83 -2.30 16 28 H 0.06 0.21 7.43 -2.39 -0.02 0.19 16 29 H 0.14 -1.55 8.12 -2.39 -0.02 -1.57 16 30 H 0.42 -5.37 8.73 -92.71 -0.81 -6.18 16 31 H 0.16 -1.43 8.12 -2.38 -0.02 -1.45 16 32 H 0.15 -1.43 8.14 -2.38 -0.02 -1.45 16 33 H 0.17 1.12 6.30 -2.91 -0.02 1.10 16 34 H 0.08 0.20 7.96 -2.39 -0.02 0.18 16 35 H 0.40 -1.66 8.74 -74.06 -0.65 -2.31 16 36 H -0.28 -1.26 7.11 99.48 0.71 -0.56 16 37 H -0.30 -2.39 7.04 99.48 0.70 -1.69 16 38 H 0.13 1.04 8.06 -2.91 -0.02 1.02 16 39 H 0.14 0.26 8.06 -2.91 -0.02 0.24 16 40 H 0.15 -0.09 8.06 -2.91 -0.02 -0.11 16 41 H 0.14 0.23 8.06 -2.91 -0.02 0.21 16 42 H 0.13 -1.50 8.14 -2.39 -0.02 -1.52 16 43 H 0.06 -0.08 8.10 -2.39 -0.02 -0.10 16 Total: 0.00 -42.86 368.59 -2.52 -45.37 By element: Atomic # 1 Polarization: -20.81 SS G_CDS: -1.98 Total: -22.79 kcal Atomic # 6 Polarization: -0.69 SS G_CDS: 4.44 Total: 3.75 kcal Atomic # 7 Polarization: 1.70 SS G_CDS: -5.08 Total: -3.37 kcal Atomic # 8 Polarization: -23.77 SS G_CDS: -2.01 Total: -25.79 kcal Atomic # 14 Polarization: 0.71 SS G_CDS: 2.11 Total: 2.82 kcal Total: -42.86 -2.52 -45.37 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_12220716_9818708.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 32.580 kcal (2) G-P(sol) polarization free energy of solvation -42.857 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -10.277 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.516 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -45.373 kcal (6) G-S(sol) free energy of system = (1) + (5) -12.792 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.05 seconds