Wall clock time and date at job start Thu Mar 4 2021 13:22:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50700 * 1 3 3 C 1.36775 * 125.79936 * 2 1 4 4 C 1.47264 * 126.94216 * 359.97438 * 3 2 1 5 5 O 1.21625 * 119.99720 * 0.02562 * 4 3 2 6 6 N 1.34773 * 119.99854 * 180.02562 * 4 3 2 7 7 C 1.46498 * 119.99862 * 180.02562 * 6 4 3 8 8 H 1.09004 * 112.84820 * 336.19555 * 7 6 4 9 9 C 1.53780 * 113.61739 * 107.49958 * 7 6 4 10 10 C 1.53782 * 87.08038 * 89.11487 * 9 7 6 11 11 H 1.08996 * 113.69115 * 270.87841 * 10 9 7 12 12 C 1.50703 * 113.61552 * 139.98151 * 10 9 7 13 13 N 1.34775 * 119.99702 * 82.50014 * 12 10 9 14 14 O 1.21278 * 120.00096 * 262.51061 * 12 10 9 15 15 C 1.53775 * 113.61626 * 204.99817 * 7 6 4 16 16 C 1.46690 * 106.11279 * 179.97438 * 3 2 1 17 17 C 1.34485 * 106.33274 * 359.97438 * 16 3 2 18 18 C 1.50696 * 125.56819 * 180.02562 * 17 16 3 19 19 O 1.42904 * 109.47224 * 64.99993 * 18 17 16 20 20 Si 1.86305 * 109.47109 * 185.00107 * 18 17 16 21 21 N 1.34655 * 125.80597 * 179.97438 * 2 1 3 22 22 H 1.09006 * 109.46576 * 270.01009 * 1 2 3 23 23 H 1.08993 * 109.47545 * 30.00969 * 1 2 3 24 24 H 1.09005 * 109.46979 * 150.01944 * 1 2 3 25 25 H 0.96998 * 119.99992 * 0.02562 * 6 4 3 26 26 H 1.09001 * 113.61651 * 203.66567 * 9 7 6 27 27 H 1.08996 * 113.61378 * 334.57049 * 9 7 6 28 28 H 0.97000 * 120.00235 * 0.02562 * 13 12 10 29 29 H 0.97007 * 119.99383 * 180.02562 * 13 12 10 30 30 H 1.09000 * 113.61496 * 25.43430 * 15 7 6 31 31 H 1.09004 * 113.61995 * 156.24742 * 15 7 6 32 32 H 1.08004 * 126.82773 * 180.26241 * 16 3 2 33 33 H 1.08998 * 109.47781 * 305.00352 * 18 17 16 34 34 H 0.96696 * 114.00668 * 179.97438 * 19 18 17 35 35 H 1.48498 * 109.99714 * 178.68491 * 20 18 17 36 36 H 1.48503 * 109.99780 * 300.00037 * 20 18 17 37 37 H 0.97009 * 124.84925 * 0.04461 * 21 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3071 1.1093 0.0000 4 6 1.8702 2.5157 -0.0005 5 8 0.6838 2.7839 -0.0006 6 7 2.7849 3.5055 -0.0010 7 6 2.3502 4.9045 -0.0009 8 1 1.3468 5.0360 -0.4060 9 6 2.5726 5.6186 1.3427 10 6 3.9689 5.9968 0.8210 11 1 4.7358 5.2554 1.0451 12 6 4.3880 7.3992 1.1797 13 7 4.9156 7.6552 2.3932 14 8 4.2503 8.2975 0.3766 15 6 3.3867 5.8716 -0.5968 16 6 3.6882 0.6152 0.0006 17 6 3.6095 -0.7274 0.0015 18 6 4.7820 -1.6741 0.0030 19 8 5.5095 -1.5296 1.2244 20 14 4.1659 -3.4258 -0.1493 21 7 2.2948 -1.0921 0.0005 22 1 -0.3633 0.0002 1.0278 23 1 -0.3634 0.8898 -0.5139 24 1 -0.3633 -0.8902 -0.5136 25 1 3.7310 3.2915 -0.0013 26 1 1.9166 6.4757 1.4955 27 1 2.5943 4.9432 2.1978 28 1 5.0260 6.9367 3.0355 29 1 5.1851 8.5580 2.6242 30 1 4.0656 5.4003 -1.3076 31 1 2.9532 6.7972 -0.9757 32 1 4.5890 1.2111 0.0048 33 1 5.4356 -1.4445 -0.8385 34 1 6.2795 -2.1102 1.2948 35 1 5.3140 -4.3670 -0.1810 36 1 3.2736 -3.7513 0.9922 37 1 1.9734 -2.0074 0.0003 There are 51 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 51 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_22_12220716_9865296.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:22:04 Heat of formation + Delta-G solvation = -36.039810 kcal Electronic energy + Delta-G solvation = -21622.204336 eV Core-core repulsion = 18174.452707 eV Total energy + Delta-G solvation = -3447.751629 eV No. of doubly occupied orbitals = 51 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 280.126 amu Computer time = 0.54 seconds Orbital eigenvalues (eV) -42.47236 -41.46585 -39.89032 -38.29190 -37.92648 -34.60407 -34.12520 -32.89053 -31.96928 -29.07810 -27.45405 -26.73932 -25.48217 -23.56669 -22.05967 -21.44713 -20.67912 -20.13800 -18.81865 -18.51627 -18.11905 -17.75873 -17.06588 -16.76026 -16.27679 -16.02522 -15.87666 -15.47725 -15.22307 -14.97358 -14.68401 -14.58774 -14.24693 -14.13653 -13.67936 -13.52713 -13.46011 -13.24973 -12.97575 -12.77921 -12.55704 -12.20494 -11.71920 -11.58124 -10.85069 -10.77747 -10.64342 -10.58139 -10.00685 -9.79469 -9.12927 -5.27809 0.78874 0.95062 1.22276 1.28789 1.64867 1.66878 1.95684 2.37748 2.59177 2.65736 3.22495 3.39573 3.47493 3.60840 3.79468 3.84689 3.87665 4.09000 4.16702 4.18763 4.26225 4.51273 4.60384 4.71407 4.72818 4.75910 4.86120 4.88132 4.93978 5.03347 5.12228 5.29273 5.67113 5.73404 5.82204 5.88755 6.21104 6.35618 6.36363 6.70291 7.31851 7.48373 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.100 4.100 2 C 0.127 3.873 3 C -0.242 4.242 4 C 0.598 3.402 5 O -0.545 6.545 6 N -0.711 5.711 7 C 0.124 3.876 8 H 0.111 0.889 9 C -0.134 4.134 10 C -0.142 4.142 11 H 0.113 0.887 12 C 0.526 3.474 13 N -0.855 5.855 14 O -0.541 6.541 15 C -0.122 4.122 16 C -0.127 4.127 17 C 0.018 3.982 18 C -0.043 4.043 19 O -0.532 6.532 20 Si 0.666 3.334 21 N -0.544 5.544 22 H 0.081 0.919 23 H 0.105 0.895 24 H 0.068 0.932 25 H 0.400 0.600 26 H 0.096 0.904 27 H 0.081 0.919 28 H 0.402 0.598 29 H 0.401 0.599 30 H 0.080 0.920 31 H 0.110 0.890 32 H 0.146 0.854 33 H 0.089 0.911 34 H 0.383 0.617 35 H -0.249 1.249 36 H -0.251 1.251 37 H 0.414 0.586 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.981 -5.617 0.303 6.367 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.157 4.157 2 C 0.008 3.992 3 C -0.252 4.252 4 C 0.387 3.613 5 O -0.424 6.424 6 N -0.362 5.362 7 C 0.018 3.982 8 H 0.129 0.871 9 C -0.173 4.173 10 C -0.164 4.164 11 H 0.131 0.869 12 C 0.311 3.689 13 N -0.418 5.418 14 O -0.417 6.417 15 C -0.161 4.161 16 C -0.151 4.151 17 C -0.089 4.089 18 C -0.153 4.153 19 O -0.339 6.339 20 Si 0.566 3.434 21 N -0.144 5.144 22 H 0.099 0.901 23 H 0.123 0.877 24 H 0.087 0.913 25 H 0.235 0.765 26 H 0.114 0.886 27 H 0.099 0.901 28 H 0.230 0.770 29 H 0.232 0.768 30 H 0.099 0.901 31 H 0.128 0.872 32 H 0.164 0.836 33 H 0.107 0.893 34 H 0.231 0.769 35 H -0.173 1.173 36 H -0.175 1.175 37 H 0.253 0.747 Dipole moment (debyes) X Y Z Total from point charges 1.476 -5.481 0.130 5.678 hybrid contribution 1.923 -0.470 1.319 2.378 sum 3.398 -5.952 1.448 7.005 Atomic orbital electron populations 1.20666 0.86436 1.04696 1.03900 1.20392 0.93787 0.85132 0.99844 1.20045 0.92989 0.91933 1.20205 1.17294 0.85201 0.83937 0.74833 1.90758 1.16552 1.84298 1.50755 1.45430 1.09741 1.04821 1.76184 1.21763 1.00051 0.80198 0.96168 0.87137 1.23369 0.94144 1.01029 0.98775 1.22863 0.98996 0.94469 1.00029 0.86898 1.20493 0.75986 0.90892 0.81509 1.43922 1.66483 1.14555 1.16883 1.90761 1.54280 1.47274 1.49434 1.23247 0.97750 1.00448 0.94645 1.21745 0.95646 0.92502 1.05246 1.19089 0.83266 0.94305 1.12281 1.23996 0.93599 1.08078 0.89655 1.86611 1.44663 1.64802 1.37861 0.95563 0.85094 0.74444 0.88282 1.41668 1.05433 1.08593 1.58669 0.90061 0.87666 0.91335 0.76494 0.88566 0.90067 0.76981 0.76808 0.90141 0.87172 0.83648 0.89312 0.76853 1.17303 1.17513 0.74709 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 0.01 9.88 36.01 0.36 0.37 16 2 C 0.13 0.14 7.17 -81.88 -0.59 -0.45 16 3 C -0.24 -0.49 6.29 -103.35 -0.65 -1.14 16 4 C 0.60 1.79 7.81 -12.59 -0.10 1.69 16 5 O -0.55 -3.22 14.41 5.26 0.08 -3.14 16 6 N -0.71 -0.12 5.26 -54.15 -0.28 -0.40 16 7 C 0.12 0.03 4.32 -67.12 -0.29 -0.26 16 8 H 0.11 0.21 7.46 -51.93 -0.39 -0.18 16 9 C -0.13 0.10 7.43 -25.92 -0.19 -0.09 16 10 C -0.14 0.17 4.03 -90.96 -0.37 -0.20 16 11 H 0.11 -0.37 8.14 -51.93 -0.42 -0.79 16 12 C 0.53 0.67 7.63 -10.98 -0.08 0.59 16 13 N -0.86 1.61 8.87 31.22 0.28 1.89 16 14 O -0.54 -3.20 16.74 5.56 0.09 -3.11 16 15 C -0.12 0.03 7.15 -25.92 -0.19 -0.15 16 16 C -0.13 -0.08 10.45 -37.50 -0.39 -0.47 16 17 C 0.02 0.00 6.13 -81.87 -0.50 -0.50 16 18 C -0.04 0.08 2.97 36.00 0.11 0.19 16 19 O -0.53 0.30 12.86 -35.23 -0.45 -0.15 16 20 Si 0.67 -1.89 30.96 -169.99 -5.26 -7.15 16 21 N -0.54 0.28 5.41 -5.43 -0.03 0.25 16 22 H 0.08 -0.02 8.14 -51.93 -0.42 -0.45 16 23 H 0.10 0.17 6.47 -51.93 -0.34 -0.16 16 24 H 0.07 -0.17 8.14 -51.93 -0.42 -0.59 16 25 H 0.40 -0.80 7.82 -40.82 -0.32 -1.11 16 26 H 0.10 -0.03 8.09 -51.93 -0.42 -0.45 16 27 H 0.08 -0.08 8.14 -51.93 -0.42 -0.50 16 28 H 0.40 -1.86 8.83 -40.82 -0.36 -2.22 16 29 H 0.40 -0.88 8.93 -40.82 -0.36 -1.25 16 30 H 0.08 -0.08 8.14 -51.93 -0.42 -0.51 16 31 H 0.11 0.14 7.44 -51.93 -0.39 -0.25 16 32 H 0.15 -0.18 7.70 -52.48 -0.40 -0.59 16 33 H 0.09 -0.32 7.96 -51.93 -0.41 -0.74 16 34 H 0.38 -1.76 8.74 45.56 0.40 -1.36 16 35 H -0.25 0.17 7.11 56.52 0.40 0.57 16 36 H -0.25 -0.02 7.11 56.52 0.40 0.38 16 37 H 0.41 -1.21 6.72 -40.82 -0.27 -1.48 16 LS Contribution 316.84 15.07 4.77 4.77 Total: 0.00 -10.85 316.84 -8.27 -19.13 By element: Atomic # 1 Polarization: -7.07 SS G_CDS: -4.58 Total: -11.65 kcal Atomic # 6 Polarization: 2.45 SS G_CDS: -2.88 Total: -0.43 kcal Atomic # 7 Polarization: 1.77 SS G_CDS: -0.04 Total: 1.74 kcal Atomic # 8 Polarization: -6.12 SS G_CDS: -0.28 Total: -6.40 kcal Atomic # 14 Polarization: -1.89 SS G_CDS: -5.26 Total: -7.15 kcal Total LS contribution 4.77 Total: 4.77 kcal Total: -10.85 -8.27 -19.13 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_12220716_9865296.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -16.913 kcal (2) G-P(sol) polarization free energy of solvation -10.855 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -27.768 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.272 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.126 kcal (6) G-S(sol) free energy of system = (1) + (5) -36.040 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.55 seconds