Wall clock time and date at job start Thu Mar 4 2021 13:22:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50700 * 1 3 3 C 1.36775 * 125.79936 * 2 1 4 4 C 1.47264 * 126.94216 * 359.97438 * 3 2 1 5 5 O 1.21625 * 119.99720 * 0.02562 * 4 3 2 6 6 N 1.34773 * 119.99854 * 180.02562 * 4 3 2 7 7 C 1.46498 * 119.99862 * 180.02562 * 6 4 3 8 8 H 1.09004 * 112.84820 * 336.19555 * 7 6 4 9 9 C 1.53780 * 113.61739 * 107.49958 * 7 6 4 10 10 C 1.53782 * 87.08038 * 89.11487 * 9 7 6 11 11 H 1.08996 * 113.69115 * 270.87841 * 10 9 7 12 12 C 1.50703 * 113.61552 * 139.98151 * 10 9 7 13 13 N 1.34775 * 119.99702 * 82.50014 * 12 10 9 14 14 O 1.21278 * 120.00096 * 262.51061 * 12 10 9 15 15 C 1.53775 * 113.61626 * 204.99817 * 7 6 4 16 16 C 1.46690 * 106.11279 * 179.97438 * 3 2 1 17 17 C 1.34485 * 106.33274 * 359.97438 * 16 3 2 18 18 C 1.50696 * 125.56819 * 180.02562 * 17 16 3 19 19 O 1.42904 * 109.47224 * 64.99993 * 18 17 16 20 20 Si 1.86305 * 109.47109 * 185.00107 * 18 17 16 21 21 N 1.34655 * 125.80597 * 179.97438 * 2 1 3 22 22 H 1.09006 * 109.46576 * 270.01009 * 1 2 3 23 23 H 1.08993 * 109.47545 * 30.00969 * 1 2 3 24 24 H 1.09005 * 109.46979 * 150.01944 * 1 2 3 25 25 H 0.96998 * 119.99992 * 0.02562 * 6 4 3 26 26 H 1.09001 * 113.61651 * 203.66567 * 9 7 6 27 27 H 1.08996 * 113.61378 * 334.57049 * 9 7 6 28 28 H 0.97000 * 120.00235 * 0.02562 * 13 12 10 29 29 H 0.97007 * 119.99383 * 180.02562 * 13 12 10 30 30 H 1.09000 * 113.61496 * 25.43430 * 15 7 6 31 31 H 1.09004 * 113.61995 * 156.24742 * 15 7 6 32 32 H 1.08004 * 126.82773 * 180.26241 * 16 3 2 33 33 H 1.08998 * 109.47781 * 305.00352 * 18 17 16 34 34 H 0.96696 * 114.00668 * 179.97438 * 19 18 17 35 35 H 1.48498 * 109.99714 * 178.68491 * 20 18 17 36 36 H 1.48503 * 109.99780 * 300.00037 * 20 18 17 37 37 H 0.97009 * 124.84925 * 0.04461 * 21 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3071 1.1093 0.0000 4 6 1.8702 2.5157 -0.0005 5 8 0.6838 2.7839 -0.0006 6 7 2.7849 3.5055 -0.0010 7 6 2.3502 4.9045 -0.0009 8 1 1.3468 5.0360 -0.4060 9 6 2.5726 5.6186 1.3427 10 6 3.9689 5.9968 0.8210 11 1 4.7358 5.2554 1.0451 12 6 4.3880 7.3992 1.1797 13 7 4.9156 7.6552 2.3932 14 8 4.2503 8.2975 0.3766 15 6 3.3867 5.8716 -0.5968 16 6 3.6882 0.6152 0.0006 17 6 3.6095 -0.7274 0.0015 18 6 4.7820 -1.6741 0.0030 19 8 5.5095 -1.5296 1.2244 20 14 4.1659 -3.4258 -0.1493 21 7 2.2948 -1.0921 0.0005 22 1 -0.3633 0.0002 1.0278 23 1 -0.3634 0.8898 -0.5139 24 1 -0.3633 -0.8902 -0.5136 25 1 3.7310 3.2915 -0.0013 26 1 1.9166 6.4757 1.4955 27 1 2.5943 4.9432 2.1978 28 1 5.0260 6.9367 3.0355 29 1 5.1851 8.5580 2.6242 30 1 4.0656 5.4003 -1.3076 31 1 2.9532 6.7972 -0.9757 32 1 4.5890 1.2111 0.0048 33 1 5.4356 -1.4445 -0.8385 34 1 6.2795 -2.1102 1.2948 35 1 5.3140 -4.3670 -0.1810 36 1 3.2736 -3.7513 0.9922 37 1 1.9734 -2.0074 0.0003 There are 51 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 51 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_12220716_9865296.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:22:03 Heat of formation + Delta-G solvation = -42.872540 kcal Electronic energy + Delta-G solvation = -21622.500625 eV Core-core repulsion = 18174.452707 eV Total energy + Delta-G solvation = -3448.047919 eV No. of doubly occupied orbitals = 51 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 280.126 amu Computer time = 0.58 seconds Orbital eigenvalues (eV) -42.46981 -41.52390 -40.05005 -38.40126 -37.82148 -34.67722 -34.22168 -32.87616 -31.97538 -29.00792 -27.47871 -26.73560 -25.46760 -23.59756 -22.11905 -21.41850 -20.76301 -20.16167 -18.70636 -18.50304 -18.08585 -17.77983 -17.08042 -16.84903 -16.27122 -16.11084 -15.85370 -15.49575 -15.22841 -15.05945 -14.74270 -14.55021 -14.31712 -14.04687 -13.68581 -13.57433 -13.41701 -13.29853 -12.90392 -12.85723 -12.51933 -12.12595 -11.71902 -11.59226 -10.96039 -10.90937 -10.66835 -10.52966 -10.12699 -9.80020 -9.13739 -5.05014 0.70353 1.12713 1.27539 1.46977 1.58513 1.80884 2.00715 2.35505 2.52207 2.63857 3.39528 3.42268 3.47725 3.72282 3.78603 3.89909 3.94501 4.09568 4.23750 4.27384 4.46370 4.53630 4.60743 4.72676 4.73233 4.77686 4.83489 4.90027 4.96210 5.05566 5.10308 5.29085 5.62611 5.71932 5.87948 5.88595 6.39881 6.45696 6.58662 6.66449 7.33611 7.35726 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.097 4.097 2 C 0.118 3.882 3 C -0.264 4.264 4 C 0.592 3.408 5 O -0.584 6.584 6 N -0.696 5.696 7 C 0.122 3.878 8 H 0.088 0.912 9 C -0.127 4.127 10 C -0.128 4.128 11 H 0.143 0.857 12 C 0.522 3.478 13 N -0.839 5.839 14 O -0.595 6.595 15 C -0.120 4.120 16 C -0.134 4.134 17 C 0.012 3.988 18 C -0.050 4.050 19 O -0.554 6.554 20 Si 0.746 3.254 21 N -0.538 5.538 22 H 0.080 0.920 23 H 0.084 0.916 24 H 0.092 0.908 25 H 0.413 0.587 26 H 0.088 0.912 27 H 0.088 0.912 28 H 0.418 0.582 29 H 0.404 0.596 30 H 0.091 0.909 31 H 0.091 0.909 32 H 0.162 0.838 33 H 0.113 0.887 34 H 0.399 0.601 35 H -0.276 1.276 36 H -0.292 1.292 37 H 0.424 0.576 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.372 -6.803 0.601 8.109 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C -0.001 4.001 3 C -0.274 4.274 4 C 0.383 3.617 5 O -0.465 6.465 6 N -0.347 5.347 7 C 0.016 3.984 8 H 0.107 0.893 9 C -0.166 4.166 10 C -0.149 4.149 11 H 0.161 0.839 12 C 0.307 3.693 13 N -0.402 5.402 14 O -0.475 6.475 15 C -0.159 4.159 16 C -0.158 4.158 17 C -0.096 4.096 18 C -0.159 4.159 19 O -0.364 6.364 20 Si 0.650 3.350 21 N -0.138 5.138 22 H 0.099 0.901 23 H 0.103 0.897 24 H 0.111 0.889 25 H 0.250 0.750 26 H 0.107 0.893 27 H 0.107 0.893 28 H 0.249 0.751 29 H 0.235 0.765 30 H 0.110 0.890 31 H 0.110 0.890 32 H 0.180 0.820 33 H 0.130 0.870 34 H 0.250 0.750 35 H -0.202 1.202 36 H -0.219 1.219 37 H 0.265 0.735 Dipole moment (debyes) X Y Z Total from point charges 2.928 -6.685 0.458 7.312 hybrid contribution 1.519 -0.134 1.284 1.993 sum 4.447 -6.819 1.741 8.325 Atomic orbital electron populations 1.20626 0.86005 1.04883 1.03907 1.20575 0.94328 0.85524 0.99714 1.20146 0.94142 0.91606 1.21507 1.17560 0.84961 0.84810 0.74407 1.90735 1.18129 1.84895 1.52782 1.45283 1.10080 1.04255 1.75103 1.21699 0.99247 0.80415 0.97035 0.89333 1.23290 0.94300 1.00634 0.98368 1.22871 0.99310 0.93799 0.98967 0.83906 1.20880 0.75498 0.91190 0.81699 1.43828 1.64790 1.15374 1.16179 1.90741 1.56732 1.48871 1.51190 1.23161 0.97706 0.99407 0.95598 1.21983 0.95507 0.93012 1.05337 1.19470 0.83836 0.94709 1.11574 1.24222 0.93436 1.08165 0.90103 1.86558 1.45673 1.65743 1.38458 0.94622 0.82053 0.72205 0.86107 1.41685 1.05293 1.08837 1.57949 0.90111 0.89702 0.88882 0.74982 0.89317 0.89294 0.75129 0.76478 0.89017 0.89027 0.82008 0.86963 0.74989 1.20184 1.21910 0.73491 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 -0.05 9.88 71.24 0.70 0.65 16 2 C 0.12 0.30 7.17 41.78 0.30 0.60 16 3 C -0.26 -1.18 6.29 -19.04 -0.12 -1.30 16 4 C 0.59 4.17 7.81 86.62 0.68 4.85 16 5 O -0.58 -8.12 14.41 -4.11 -0.06 -8.17 16 6 N -0.70 -0.41 5.26 -443.47 -2.33 -2.74 16 7 C 0.12 0.17 4.32 45.52 0.20 0.37 16 8 H 0.09 0.55 7.46 -2.38 -0.02 0.53 16 9 C -0.13 0.16 7.43 31.12 0.23 0.39 16 10 C -0.13 0.37 4.03 -11.01 -0.04 0.32 16 11 H 0.14 -1.25 8.14 -2.39 -0.02 -1.27 16 12 C 0.52 1.36 7.63 87.66 0.67 2.03 16 13 N -0.84 3.76 8.87 -173.53 -1.54 2.22 16 14 O -0.59 -7.77 16.74 -3.02 -0.05 -7.82 16 15 C -0.12 0.00 7.15 31.12 0.22 0.22 16 16 C -0.13 -0.07 10.45 23.62 0.25 0.18 16 17 C 0.01 -0.01 6.13 40.98 0.25 0.24 16 18 C -0.05 0.26 2.97 71.23 0.21 0.47 16 19 O -0.55 1.34 12.86 -148.98 -1.92 -0.58 16 20 Si 0.75 -4.90 30.96 68.60 2.12 -2.77 16 21 N -0.54 0.80 5.41 -171.08 -0.93 -0.12 16 22 H 0.08 0.03 8.14 -2.38 -0.02 0.01 16 23 H 0.08 0.44 6.47 -2.39 -0.02 0.43 16 24 H 0.09 -0.48 8.14 -2.38 -0.02 -0.49 16 25 H 0.41 -1.98 7.82 -92.71 -0.73 -2.71 16 26 H 0.09 0.04 8.09 -2.39 -0.02 0.02 16 27 H 0.09 -0.22 8.14 -2.39 -0.02 -0.24 16 28 H 0.42 -4.49 8.83 -92.71 -0.82 -5.31 16 29 H 0.40 -1.95 8.93 -92.70 -0.83 -2.78 16 30 H 0.09 -0.21 8.14 -2.39 -0.02 -0.23 16 31 H 0.09 0.40 7.44 -2.38 -0.02 0.38 16 32 H 0.16 -0.64 7.70 -2.91 -0.02 -0.66 16 33 H 0.11 -1.09 7.96 -2.39 -0.02 -1.11 16 34 H 0.40 -4.17 8.74 -74.06 -0.65 -4.82 16 35 H -0.28 0.57 7.11 99.48 0.71 1.28 16 36 H -0.29 -0.09 7.11 99.48 0.71 0.62 16 37 H 0.42 -2.73 6.72 -92.70 -0.62 -3.35 16 Total: 0.00 -27.09 316.84 -3.59 -30.68 By element: Atomic # 1 Polarization: -17.27 SS G_CDS: -2.44 Total: -19.70 kcal Atomic # 6 Polarization: 5.47 SS G_CDS: 3.54 Total: 9.02 kcal Atomic # 7 Polarization: 4.16 SS G_CDS: -4.80 Total: -0.64 kcal Atomic # 8 Polarization: -14.55 SS G_CDS: -2.03 Total: -16.58 kcal Atomic # 14 Polarization: -4.90 SS G_CDS: 2.12 Total: -2.77 kcal Total: -27.09 -3.59 -30.68 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_12220716_9865296.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -12.196 kcal (2) G-P(sol) polarization free energy of solvation -27.085 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -39.281 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.592 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.677 kcal (6) G-S(sol) free energy of system = (1) + (5) -42.873 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.58 seconds