Wall clock time and date at job start Thu Mar 4 2021 14:04:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46506 * 1 3 3 C 1.46500 * 119.99772 * 2 1 4 4 C 1.53000 * 109.47042 * 270.00119 * 3 2 1 5 5 H 1.08997 * 112.91050 * 316.24946 * 4 3 2 6 6 C 1.53780 * 113.61575 * 87.50850 * 4 3 2 7 7 C 1.54049 * 87.08248 * 139.97188 * 6 4 3 8 8 H 1.09001 * 113.60855 * 89.06855 * 7 6 4 9 9 O 1.42888 * 113.69985 * 220.05235 * 7 6 4 10 10 C 1.53783 * 113.61232 * 185.00171 * 4 3 2 11 11 C 1.34775 * 120.00047 * 180.02562 * 2 1 3 12 12 O 1.21568 * 120.00088 * 175.94305 * 11 2 1 13 13 C 1.47713 * 120.00133 * 355.94165 * 11 2 1 14 14 N 1.31809 * 126.51422 * 5.55460 * 13 11 2 15 15 N 1.28471 * 110.06764 * 179.85735 * 14 13 11 16 16 C 1.46509 * 124.87983 * 180.19817 * 15 14 13 17 17 C 1.35033 * 110.23297 * 0.41568 * 15 14 13 18 18 C 1.50693 * 126.38322 * 179.76780 * 17 15 14 19 19 O 1.42901 * 109.47476 * 30.00255 * 18 17 15 20 20 Si 1.86302 * 109.46941 * 150.00231 * 18 17 15 21 21 C 1.35363 * 107.22629 * 359.75037 * 17 15 14 22 22 H 1.08999 * 109.46824 * 95.67578 * 1 2 3 23 23 H 1.08995 * 109.46819 * 215.67374 * 1 2 3 24 24 H 1.08998 * 109.47104 * 335.67665 * 1 2 3 25 25 H 1.09000 * 109.46872 * 150.00214 * 3 2 1 26 26 H 1.08991 * 109.47270 * 30.00474 * 3 2 1 27 27 H 1.08998 * 113.60997 * 254.52959 * 6 4 3 28 28 H 1.09004 * 113.61272 * 25.42761 * 6 4 3 29 29 H 0.96704 * 113.99740 * 277.42745 * 9 7 6 30 30 H 1.09001 * 113.61549 * 334.56817 * 10 4 3 31 31 H 1.09004 * 113.61804 * 105.38833 * 10 4 3 32 32 H 1.08992 * 109.47333 * 270.24442 * 16 15 14 33 33 H 1.08993 * 109.46873 * 30.25329 * 16 15 14 34 34 H 1.09003 * 109.46274 * 150.24225 * 16 15 14 35 35 H 1.09001 * 109.47365 * 270.00025 * 18 17 15 36 36 H 0.96701 * 113.99812 * 59.99552 * 19 18 17 37 37 H 1.48504 * 110.00275 * 179.97438 * 20 18 17 38 38 H 1.48500 * 109.99997 * 301.31933 * 20 18 17 39 39 H 1.08003 * 127.24602 * 179.97438 * 21 17 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4651 0.0000 0.0000 3 6 2.1975 1.2688 0.0000 4 6 2.4525 1.7104 -1.4425 5 1 2.7826 0.8936 -2.0843 6 6 1.3071 2.5421 -2.0437 7 6 2.3921 3.4210 -2.6944 8 1 2.7057 3.0708 -3.6778 9 8 2.0902 4.8174 -2.6713 10 6 3.3232 2.9730 -1.5554 11 6 2.1389 -1.1672 -0.0005 12 8 3.3523 -1.1685 -0.0750 13 6 1.4032 -2.4449 0.0894 14 7 0.0943 -2.5990 0.0725 15 7 -0.2041 -3.8451 0.1667 16 6 -1.5673 -4.3818 0.1754 17 6 0.9192 -4.5884 0.2615 18 6 0.9904 -6.0879 0.3926 19 8 -0.1337 -6.6775 -0.2638 20 14 2.5627 -6.7059 -0.3929 21 6 1.9693 -3.7354 0.2163 22 1 -0.3633 -0.1016 -1.0226 23 1 -0.3633 -0.8348 0.5993 24 1 -0.3633 0.9364 0.4233 25 1 3.1499 1.1384 0.5138 26 1 1.6085 2.0283 0.5139 27 1 0.7001 1.9930 -2.7635 28 1 0.7100 3.0664 -1.2976 29 1 1.5049 5.1051 -3.3853 30 1 3.2772 3.6152 -0.6758 31 1 4.3442 2.7718 -1.8796 32 1 -1.9335 -4.4271 1.2010 33 1 -2.2164 -3.7344 -0.4141 34 1 -1.5660 -5.3835 -0.2546 35 1 0.9796 -6.3613 1.4477 36 1 -0.1881 -6.4758 -1.2079 37 1 2.6453 -8.1836 -0.2697 38 1 2.6043 -6.3120 -1.8241 39 1 3.0184 -3.9869 0.2670 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_22_12312124_13259642.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 14:04:05 Heat of formation + Delta-G solvation = 12.794867 kcal Electronic energy + Delta-G solvation = -22628.937017 eV Core-core repulsion = 19155.991540 eV Total energy + Delta-G solvation = -3472.945477 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 282.141 amu Computer time = 0.60 seconds Orbital eigenvalues (eV) -43.82955 -40.92587 -39.75621 -38.38393 -36.74268 -35.58774 -34.38694 -32.68294 -29.93324 -28.51693 -27.29267 -26.74803 -26.62321 -24.38851 -22.85081 -22.00194 -20.56042 -20.22939 -18.79223 -18.45747 -17.76874 -17.52442 -17.13281 -16.98989 -16.51275 -16.16561 -15.95680 -15.74918 -15.11658 -14.98407 -14.80970 -14.37446 -14.16110 -14.00220 -13.73758 -13.55680 -13.48010 -13.39154 -13.01992 -12.69463 -12.63815 -12.32868 -12.14021 -11.80880 -11.69914 -11.23996 -11.09218 -10.91323 -10.72760 -10.13787 -9.95929 -9.53749 -5.02871 0.55056 0.82919 1.15514 1.47341 1.59099 1.86503 2.06829 2.47535 2.84597 3.23584 3.28425 3.33016 3.57623 3.62796 3.84906 3.86113 3.96471 4.06068 4.19251 4.23866 4.29361 4.37261 4.41142 4.43479 4.51277 4.65773 4.69433 4.74137 4.80372 4.81944 4.89107 4.97542 5.03328 5.16400 5.32522 5.42381 5.60540 5.73458 5.97894 6.39253 6.72520 6.84499 7.27517 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.075 3.925 2 N -0.603 5.603 3 C 0.129 3.871 4 C -0.123 4.123 5 H 0.096 0.904 6 C -0.163 4.163 7 C 0.075 3.925 8 H 0.081 0.919 9 O -0.560 6.560 10 C -0.121 4.121 11 C 0.602 3.398 12 O -0.528 6.528 13 C -0.013 4.013 14 N -0.255 5.255 15 N -0.269 5.269 16 C 0.070 3.930 17 C -0.018 4.018 18 C -0.049 4.049 19 O -0.530 6.530 20 Si 0.715 3.285 21 C -0.171 4.171 22 H 0.054 0.946 23 H 0.096 0.904 24 H 0.067 0.933 25 H 0.089 0.911 26 H 0.082 0.918 27 H 0.066 0.934 28 H 0.089 0.911 29 H 0.378 0.622 30 H 0.092 0.908 31 H 0.076 0.924 32 H 0.084 0.916 33 H 0.093 0.907 34 H 0.117 0.883 35 H 0.129 0.871 36 H 0.379 0.621 37 H -0.249 1.249 38 H -0.255 1.255 39 H 0.171 0.829 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.644 -1.756 -0.207 4.050 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 N -0.335 5.335 3 C 0.007 3.993 4 C -0.142 4.142 5 H 0.114 0.886 6 C -0.201 4.201 7 C 0.016 3.984 8 H 0.099 0.901 9 O -0.366 6.366 10 C -0.159 4.159 11 C 0.389 3.611 12 O -0.402 6.402 13 C -0.171 4.171 14 N -0.092 5.092 15 N -0.057 5.057 16 C -0.069 4.069 17 C -0.143 4.143 18 C -0.159 4.159 19 O -0.337 6.337 20 Si 0.613 3.387 21 C -0.199 4.199 22 H 0.073 0.927 23 H 0.114 0.886 24 H 0.086 0.914 25 H 0.107 0.893 26 H 0.100 0.900 27 H 0.085 0.915 28 H 0.108 0.892 29 H 0.225 0.775 30 H 0.111 0.889 31 H 0.095 0.905 32 H 0.103 0.897 33 H 0.111 0.889 34 H 0.135 0.865 35 H 0.147 0.853 36 H 0.228 0.772 37 H -0.174 1.174 38 H -0.179 1.179 39 H 0.189 0.811 Dipole moment (debyes) X Y Z Total from point charges -3.511 -1.968 0.186 4.029 hybrid contribution -0.967 -0.266 -1.134 1.514 sum -4.478 -2.234 -0.948 5.093 Atomic orbital electron populations 1.22161 0.78418 1.03598 1.02640 1.47660 1.07686 1.05428 1.72753 1.21527 0.97917 0.83969 0.95906 1.22713 0.97275 0.96783 0.97465 0.88607 1.23809 0.97167 0.98215 1.00915 1.23379 0.96273 0.80732 0.98066 0.90128 1.86532 1.70935 1.23883 1.55223 1.23053 0.98327 0.95688 0.98797 1.16958 0.86094 0.81644 0.76450 1.90812 1.12765 1.86579 1.50068 1.21787 0.89616 0.95081 1.10660 1.73709 1.16241 0.99761 1.19447 1.45527 1.07644 1.02994 1.49536 1.22606 0.77492 1.01823 1.05026 1.21895 0.86968 0.95933 1.09531 1.24796 1.00678 0.86454 1.03984 1.86573 1.45294 1.75022 1.26790 0.94093 0.81172 0.81035 0.82371 1.21425 0.99872 0.90326 1.08242 0.92707 0.88553 0.91450 0.89300 0.89983 0.91479 0.89218 0.77467 0.88918 0.90490 0.89700 0.88851 0.86523 0.85314 0.77218 1.17359 1.17936 0.81134 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 0.00 9.72 59.85 0.58 0.58 16 2 N -0.60 -1.13 2.87 -182.75 -0.53 -1.66 16 3 C 0.13 0.11 5.25 -4.04 -0.02 0.09 16 4 C -0.12 -0.08 3.97 -89.81 -0.36 -0.43 16 5 H 0.10 0.20 8.14 -51.93 -0.42 -0.22 16 6 C -0.16 0.04 7.48 -25.78 -0.19 -0.15 16 7 C 0.07 0.03 5.23 -25.78 -0.13 -0.11 16 8 H 0.08 -0.04 8.14 -51.93 -0.42 -0.46 16 9 O -0.56 -0.75 13.67 -35.23 -0.48 -1.23 16 10 C -0.12 -0.08 7.46 -25.92 -0.19 -0.28 16 11 C 0.60 2.52 7.67 -12.39 -0.10 2.42 16 12 O -0.53 -3.57 16.55 5.31 0.09 -3.48 16 13 C -0.01 -0.04 6.83 -82.77 -0.57 -0.61 16 14 N -0.25 -0.49 8.47 33.42 0.28 -0.21 16 15 N -0.27 -0.08 3.70 -63.85 -0.24 -0.32 16 16 C 0.07 -0.20 11.00 59.85 0.66 0.46 16 17 C -0.02 0.00 6.18 -82.21 -0.51 -0.51 16 18 C -0.05 0.10 2.99 36.00 0.11 0.20 16 19 O -0.53 1.05 10.02 -35.23 -0.35 0.70 16 20 Si 0.72 -1.40 31.23 -169.99 -5.31 -6.71 16 21 C -0.17 -0.26 9.35 -39.37 -0.37 -0.62 16 22 H 0.05 0.00 8.14 -51.93 -0.42 -0.42 16 23 H 0.10 0.06 5.27 -51.93 -0.27 -0.21 16 24 H 0.07 -0.10 7.83 -51.93 -0.41 -0.51 16 25 H 0.09 0.18 7.48 -51.93 -0.39 -0.21 16 26 H 0.08 -0.06 7.56 -51.93 -0.39 -0.45 16 27 H 0.07 -0.03 8.14 -51.93 -0.42 -0.45 16 28 H 0.09 -0.02 7.90 -51.93 -0.41 -0.43 16 29 H 0.38 -1.02 9.12 45.56 0.42 -0.60 16 30 H 0.09 0.08 8.10 -51.93 -0.42 -0.34 16 31 H 0.08 0.05 8.14 -51.93 -0.42 -0.37 16 32 H 0.08 -0.29 8.14 -51.93 -0.42 -0.71 16 33 H 0.09 -0.35 8.14 -51.93 -0.42 -0.78 16 34 H 0.12 -0.46 5.00 -51.93 -0.26 -0.72 16 35 H 0.13 -0.37 7.96 -51.93 -0.41 -0.79 16 36 H 0.38 -1.67 8.39 45.56 0.38 -1.29 16 37 H -0.25 -0.17 7.11 56.52 0.40 0.23 16 38 H -0.26 -0.21 7.11 56.52 0.40 0.19 16 39 H 0.17 -0.04 7.03 -52.48 -0.37 -0.41 16 LS Contribution 322.49 15.07 4.86 4.86 Total: 0.00 -8.50 322.49 -7.45 -15.95 By element: Atomic # 1 Polarization: -4.25 SS G_CDS: -4.69 Total: -8.95 kcal Atomic # 6 Polarization: 2.13 SS G_CDS: -1.09 Total: 1.04 kcal Atomic # 7 Polarization: -1.70 SS G_CDS: -0.48 Total: -2.18 kcal Atomic # 8 Polarization: -3.27 SS G_CDS: -0.75 Total: -4.01 kcal Atomic # 14 Polarization: -1.40 SS G_CDS: -5.31 Total: -6.71 kcal Total LS contribution 4.86 Total: 4.86 kcal Total: -8.50 -7.45 -15.95 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_12312124_13259642.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 28.746 kcal (2) G-P(sol) polarization free energy of solvation -8.497 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 20.250 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.455 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.952 kcal (6) G-S(sol) free energy of system = (1) + (5) 12.795 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.60 seconds