Wall clock time and date at job start Thu Mar 4 2021 15:37:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42896 * 1 3 3 C 1.42907 * 113.99716 * 2 1 4 4 H 1.09000 * 112.84761 * 341.19572 * 3 2 1 5 5 C 1.54053 * 113.69382 * 112.46830 * 3 2 1 6 6 C 1.53784 * 86.98444 * 139.99065 * 5 3 2 7 7 H 1.08998 * 113.60778 * 219.97991 * 6 5 3 8 8 N 1.46496 * 113.61656 * 89.16282 * 6 5 3 9 9 C 1.34769 * 120.00279 * 105.85917 * 8 6 5 10 10 O 1.21589 * 120.00244 * 0.02562 * 9 8 6 11 11 C 1.47575 * 120.00250 * 179.97438 * 9 8 6 12 12 C 1.36494 * 120.01372 * 179.97438 * 11 9 8 13 13 N 1.35945 * 120.50933 * 179.76868 * 12 11 9 14 14 C 1.37003 * 132.41446 * 179.64476 * 13 12 11 15 15 C 1.50699 * 126.42774 * 0.67899 * 14 13 12 16 16 O 1.42901 * 109.46830 * 329.71686 * 15 14 13 17 17 Si 1.86298 * 109.46950 * 209.72124 * 15 14 13 18 18 C 1.35003 * 107.14169 * 180.42333 * 14 13 12 19 19 N 1.33585 * 108.66015 * 0.22141 * 18 14 13 20 20 C 1.32421 * 109.22071 * 0.02562 * 19 18 14 21 21 C 1.41245 * 132.11555 * 180.02562 * 20 19 18 22 22 Br 1.89106 * 120.25554 * 359.97094 * 21 20 19 23 23 C 1.35711 * 119.49059 * 179.97438 * 21 20 19 24 24 C 1.53781 * 87.17191 * 334.56701 * 6 5 3 25 25 H 1.09007 * 109.46974 * 179.97438 * 1 2 3 26 26 H 1.09000 * 109.47223 * 300.00005 * 1 2 3 27 27 H 1.08997 * 109.47290 * 60.00055 * 1 2 3 28 28 H 1.08996 * 113.61765 * 25.48381 * 5 3 2 29 29 H 1.09008 * 113.69135 * 254.50354 * 5 3 2 30 30 H 0.97008 * 119.99444 * 285.86727 * 8 6 5 31 31 H 1.08002 * 119.74189 * 0.02562 * 12 11 9 32 32 H 1.08991 * 109.47351 * 89.71834 * 15 14 13 33 33 H 0.96708 * 114.00246 * 299.99864 * 16 15 14 34 34 H 1.48506 * 109.99834 * 180.02562 * 17 15 14 35 35 H 1.48502 * 110.00011 * 301.31529 * 17 15 14 36 36 H 1.08004 * 125.67040 * 180.19950 * 18 14 13 37 37 H 1.07993 * 120.23318 * 180.02562 * 23 21 20 38 38 H 1.08998 * 113.61073 * 140.02354 * 24 6 5 39 39 H 1.08993 * 113.61945 * 270.92867 * 24 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0101 1.3055 0.0000 4 1 1.3136 2.0789 -0.3238 5 6 2.7544 1.6518 1.3036 6 6 3.8219 2.3201 0.4210 7 1 4.8423 2.1439 0.7612 8 7 3.5515 3.7323 0.1406 9 6 4.2705 4.6914 0.7567 10 8 5.1439 4.3846 1.5450 11 6 3.9984 6.1140 0.4738 12 6 4.7261 7.0855 1.0981 13 7 4.4872 8.3990 0.8415 14 6 5.0512 9.5517 1.3211 15 6 6.1739 9.6496 2.3216 16 8 6.1207 8.5302 3.2083 17 14 5.9984 11.2254 3.2997 18 6 4.4163 10.5833 0.7250 19 7 3.4832 10.0939 -0.0961 20 6 3.5040 8.7710 -0.0405 21 6 2.7384 7.7831 -0.6985 22 35 1.3863 8.2837 -1.9221 23 6 2.9805 6.4719 -0.4457 24 6 3.3755 1.3720 -0.7045 25 1 -0.3633 -1.0277 -0.0005 26 1 -0.3634 0.5138 0.8900 27 1 -0.3634 0.5138 -0.8900 28 1 3.1189 0.7781 1.8437 29 1 2.2159 2.3516 1.9428 30 1 2.8548 3.9771 -0.4885 31 1 5.5004 6.8085 1.7981 32 1 7.1291 9.6522 1.7967 33 1 5.2965 8.4645 3.7098 34 1 7.1001 11.3342 4.2895 35 1 6.0202 12.3956 2.3856 36 1 4.6275 11.6302 0.8857 37 1 2.4027 5.7066 -0.9424 38 1 3.3381 1.8459 -1.6853 39 1 3.9094 0.4218 -0.7125 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_12343576_12335884.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 15:37:18 Heat of formation + Delta-G solvation = 26.051650 kcal Electronic energy + Delta-G solvation = -26524.436570 eV Core-core repulsion = 22483.107145 eV Total energy + Delta-G solvation = -4041.329425 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 382.036 amu Computer time = 0.79 seconds Orbital eigenvalues (eV) -44.29559 -41.59873 -40.06361 -38.49656 -38.01639 -37.32042 -35.39863 -34.23213 -32.42381 -31.78832 -30.27503 -27.84588 -26.92125 -26.76744 -26.14706 -24.60235 -24.11391 -22.64475 -22.12526 -20.71298 -19.60975 -18.71368 -18.27973 -17.89160 -17.69023 -17.49581 -16.79864 -16.67722 -16.32755 -16.14782 -15.95759 -15.87044 -15.73692 -15.47109 -15.09973 -14.72868 -14.15502 -14.06690 -13.69741 -13.53494 -13.41452 -13.37388 -13.30932 -13.03559 -12.69901 -12.17310 -12.15614 -11.95240 -11.61014 -11.51664 -11.39394 -11.36151 -11.28550 -10.90483 -10.45373 -10.30336 -10.04400 -9.11313 -4.95891 -0.92594 -0.40136 0.17824 0.94767 1.08793 1.38757 1.65087 1.76170 1.85861 1.99018 2.19606 2.78174 2.89654 3.04715 3.15667 3.33031 3.40697 3.45802 3.46365 3.54290 3.80427 3.83474 3.96497 4.09125 4.22784 4.31911 4.38293 4.42381 4.47464 4.51011 4.57245 4.75766 4.77040 4.85687 4.90760 4.94950 4.97316 5.00992 5.24373 5.39314 5.54450 6.25199 6.30177 6.40871 6.49501 6.92981 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.023 3.977 2 O -0.400 6.400 3 C 0.058 3.942 4 H 0.108 0.892 5 C -0.166 4.166 6 C 0.121 3.879 7 H 0.099 0.901 8 N -0.690 5.690 9 C 0.583 3.417 10 O -0.562 6.562 11 C -0.168 4.168 12 C 0.162 3.838 13 N -0.356 5.356 14 C -0.080 4.080 15 C -0.044 4.044 16 O -0.553 6.553 17 Si 0.806 3.194 18 C 0.035 3.965 19 N -0.493 5.493 20 C 0.227 3.773 21 C -0.080 4.080 22 Br 0.006 6.994 23 C -0.023 4.023 24 C -0.135 4.135 25 H 0.088 0.912 26 H 0.047 0.953 27 H 0.054 0.946 28 H 0.093 0.907 29 H 0.074 0.926 30 H 0.416 0.584 31 H 0.194 0.806 32 H 0.120 0.880 33 H 0.396 0.604 34 H -0.287 1.287 35 H -0.267 1.267 36 H 0.208 0.792 37 H 0.186 0.814 38 H 0.097 0.903 39 H 0.103 0.897 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.008 -1.027 0.386 4.155 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.073 4.073 2 O -0.319 6.319 3 C 0.000 4.000 4 H 0.125 0.875 5 C -0.205 4.205 6 C 0.016 3.984 7 H 0.117 0.883 8 N -0.342 5.342 9 C 0.369 3.631 10 O -0.441 6.441 11 C -0.176 4.176 12 C 0.036 3.964 13 N -0.029 5.029 14 C -0.191 4.191 15 C -0.153 4.153 16 O -0.361 6.361 17 Si 0.706 3.294 18 C -0.114 4.114 19 N -0.212 5.212 20 C -0.018 4.018 21 C -0.162 4.162 22 Br 0.091 6.909 23 C -0.049 4.049 24 C -0.173 4.173 25 H 0.107 0.893 26 H 0.066 0.934 27 H 0.073 0.927 28 H 0.112 0.888 29 H 0.093 0.907 30 H 0.255 0.745 31 H 0.211 0.789 32 H 0.137 0.863 33 H 0.246 0.754 34 H -0.214 1.214 35 H -0.192 1.192 36 H 0.224 0.776 37 H 0.203 0.797 38 H 0.115 0.885 39 H 0.121 0.879 Dipole moment (debyes) X Y Z Total from point charges -3.324 -0.046 -0.012 3.325 hybrid contribution 0.654 -0.585 -0.064 0.880 sum -2.670 -0.631 -0.075 2.745 Atomic orbital electron populations 1.22947 0.79915 1.03590 1.00835 1.87928 1.21109 1.28228 1.94629 1.24038 0.94310 0.85512 0.96093 0.87463 1.24008 0.97732 1.01000 0.97788 1.21621 0.99969 0.79143 0.97666 0.88330 1.45376 1.38297 1.05005 1.45524 1.17532 0.80985 0.84430 0.80104 1.90859 1.33570 1.83267 1.36395 1.19192 1.01416 0.93416 1.03533 1.22255 0.97664 0.79883 0.96604 1.42712 1.25292 1.05806 1.29116 1.22358 1.05227 0.83740 1.07782 1.25171 0.95746 1.02935 0.91453 1.86488 1.44705 1.47504 1.57360 0.93069 0.86489 0.70715 0.79102 1.22850 0.93125 1.00485 0.94939 1.70831 1.22990 1.04232 1.23145 1.20715 0.93484 0.91932 0.95709 1.20561 1.00364 0.92719 1.02573 1.96848 1.45498 1.93512 1.55044 1.21354 0.94747 0.94585 0.94198 1.23569 0.95283 0.99983 0.98419 0.89305 0.93425 0.92692 0.88821 0.90740 0.74536 0.78914 0.86289 0.75401 1.21421 1.19232 0.77560 0.79696 0.88483 0.87857 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.09 10.85 113.37 1.23 1.14 16 2 O -0.40 -0.28 10.72 -148.98 -1.60 -1.88 16 3 C 0.06 -0.26 4.20 31.21 0.13 -0.13 16 4 H 0.11 -0.96 7.87 -2.39 -0.02 -0.97 16 5 C -0.17 0.45 7.73 31.21 0.24 0.70 16 6 C 0.12 -0.40 4.30 45.52 0.20 -0.21 16 7 H 0.10 0.06 7.50 -2.39 -0.02 0.04 16 8 N -0.69 3.68 5.22 -443.17 -2.31 1.37 16 9 C 0.58 0.21 7.76 86.71 0.67 0.88 16 10 O -0.56 -4.66 15.89 -4.00 -0.06 -4.72 16 11 C -0.17 0.23 5.84 -20.35 -0.12 0.11 16 12 C 0.16 0.13 9.91 83.65 0.83 0.95 16 13 N -0.36 -0.87 2.93 -337.71 -0.99 -1.86 16 14 C -0.08 -0.04 6.24 41.01 0.26 0.22 16 15 C -0.04 0.13 3.06 71.24 0.22 0.35 16 16 O -0.55 1.43 10.90 -148.98 -1.62 -0.19 16 17 Si 0.81 -4.59 31.34 68.60 2.15 -2.44 16 18 C 0.04 0.08 10.44 83.68 0.87 0.95 16 19 N -0.49 -3.66 11.30 -194.10 -2.19 -5.86 16 20 C 0.23 1.18 7.59 134.18 1.02 2.20 16 21 C -0.08 -0.11 6.24 22.42 0.14 0.03 16 22 Br 0.01 0.01 33.72 -20.37 -0.69 -0.68 16 23 C -0.02 0.09 9.26 22.56 0.21 0.30 16 24 C -0.13 0.75 7.65 31.12 0.24 0.98 16 25 H 0.09 -0.41 8.14 -2.38 -0.02 -0.43 16 26 H 0.05 -0.24 8.14 -2.39 -0.02 -0.26 16 27 H 0.05 -0.35 8.14 -2.39 -0.02 -0.37 16 28 H 0.09 -0.07 8.14 -2.39 -0.02 -0.09 16 29 H 0.07 -0.19 8.14 -2.38 -0.02 -0.21 16 30 H 0.42 -4.79 6.74 -92.70 -0.62 -5.41 16 31 H 0.19 0.20 6.19 -2.91 -0.02 0.19 16 32 H 0.12 -0.29 7.96 -2.39 -0.02 -0.31 16 33 H 0.40 -3.74 8.70 -74.05 -0.64 -4.38 16 34 H -0.29 -0.35 7.11 99.48 0.71 0.36 16 35 H -0.27 0.69 6.80 99.48 0.68 1.37 16 36 H 0.21 -0.58 6.70 -2.91 -0.02 -0.60 16 37 H 0.19 -2.14 6.44 -2.91 -0.02 -2.15 16 38 H 0.10 -0.84 8.14 -2.39 -0.02 -0.86 16 39 H 0.10 -0.41 8.14 -2.39 -0.02 -0.43 16 Total: 0.00 -20.99 352.09 -1.32 -22.30 By element: Atomic # 1 Polarization: -14.39 SS G_CDS: -0.13 Total: -14.53 kcal Atomic # 6 Polarization: 2.35 SS G_CDS: 6.13 Total: 8.48 kcal Atomic # 7 Polarization: -0.85 SS G_CDS: -5.50 Total: -6.35 kcal Atomic # 8 Polarization: -3.51 SS G_CDS: -3.28 Total: -6.79 kcal Atomic # 14 Polarization: -4.59 SS G_CDS: 2.15 Total: -2.44 kcal Atomic # 35 Polarization: 0.01 SS G_CDS: -0.69 Total: -0.68 kcal Total: -20.99 -1.32 -22.30 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_12343576_12335884.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 48.356 kcal (2) G-P(sol) polarization free energy of solvation -20.987 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 27.369 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.318 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.305 kcal (6) G-S(sol) free energy of system = (1) + (5) 26.052 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.80 seconds