Wall clock time and date at job start Thu Mar 4 2021 15:47:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42892 * 1 3 3 C 1.42903 * 114.00058 * 2 1 4 4 H 1.09004 * 112.90318 * 18.74423 * 3 2 1 5 5 C 1.53771 * 113.61878 * 149.99887 * 3 2 1 6 6 C 1.53778 * 87.08281 * 139.97946 * 5 3 2 7 7 H 1.09005 * 113.61305 * 89.20595 * 6 5 3 8 8 C 1.52999 * 113.61697 * 220.01519 * 6 5 3 9 9 N 1.46505 * 109.47192 * 185.00105 * 8 6 5 10 10 C 1.34777 * 119.99724 * 180.02562 * 9 8 6 11 11 O 1.21593 * 120.00265 * 359.97438 * 10 9 8 12 12 C 1.47579 * 119.99797 * 179.72717 * 10 9 8 13 13 C 1.36491 * 120.01069 * 179.97438 * 12 10 9 14 14 N 1.35945 * 120.50793 * 179.76151 * 13 12 10 15 15 C 1.36996 * 132.41819 * 180.22279 * 14 13 12 16 16 C 1.50702 * 126.42771 * 0.25886 * 15 14 13 17 17 O 1.42900 * 109.46900 * 330.00360 * 16 15 14 18 18 Si 1.86298 * 109.47208 * 209.99904 * 16 15 14 19 19 C 1.35001 * 107.14403 * 180.26289 * 15 14 13 20 20 N 1.33585 * 108.65952 * 359.97438 * 19 15 14 21 21 C 1.32417 * 109.21790 * 0.02562 * 20 19 15 22 22 C 1.41251 * 132.11329 * 180.02562 * 21 20 19 23 23 Br 1.89093 * 120.25735 * 359.93699 * 22 21 20 24 24 C 1.35702 * 119.48841 * 179.97438 * 22 21 20 25 25 C 1.53781 * 87.08260 * 334.56939 * 6 5 3 26 26 H 1.09004 * 109.47125 * 179.97438 * 1 2 3 27 27 H 1.08995 * 109.47407 * 299.99830 * 1 2 3 28 28 H 1.09001 * 109.47489 * 60.00227 * 1 2 3 29 29 H 1.08997 * 113.61625 * 25.43301 * 5 3 2 30 30 H 1.08999 * 113.69408 * 254.54157 * 5 3 2 31 31 H 1.09003 * 109.46803 * 65.00774 * 8 6 5 32 32 H 1.08993 * 109.47533 * 305.00493 * 8 6 5 33 33 H 0.97000 * 119.99792 * 0.02562 * 9 8 6 34 34 H 1.08005 * 119.74677 * 359.97438 * 13 12 10 35 35 H 1.08998 * 109.46641 * 90.00007 * 16 15 14 36 36 H 0.96708 * 113.99773 * 179.97438 * 17 16 15 37 37 H 1.48504 * 109.99876 * 60.00300 * 18 16 15 38 38 H 1.48498 * 109.99845 * 181.32099 * 18 16 15 39 39 H 1.08000 * 125.67560 * 179.97438 * 19 15 14 40 40 H 1.08003 * 120.23544 * 180.02562 * 24 22 21 41 41 H 1.08997 * 113.61436 * 139.98102 * 25 6 5 42 42 H 1.09000 * 113.61276 * 270.88320 * 25 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 1 1.3141 2.0798 0.3227 5 6 3.3754 1.3720 0.7045 6 6 3.8226 2.3182 -0.4223 7 1 3.6234 3.3695 -0.2144 8 6 5.2542 2.0681 -0.9007 9 7 5.6259 3.0888 -1.8837 10 6 6.8504 3.0681 -2.4464 11 8 7.6468 2.2026 -2.1379 12 6 7.2227 4.0927 -3.4411 13 6 8.4629 4.0723 -4.0108 14 7 8.8149 5.0083 -4.9317 15 6 9.9651 5.2144 -5.6468 16 6 11.2195 4.3816 -5.5835 17 8 11.3513 3.8176 -4.2772 18 14 12.6972 5.4558 -5.9483 19 6 9.7640 6.3036 -6.4187 20 7 8.5300 6.7638 -6.1954 21 6 7.9341 5.9950 -5.2969 22 6 6.6469 6.0392 -4.7169 23 35 5.4247 7.3945 -5.2119 24 6 6.2944 5.1019 -3.8010 25 6 2.7533 1.6489 -1.3018 26 1 -0.3633 -1.0277 -0.0005 27 1 -0.3634 0.5138 0.8899 28 1 -0.3634 0.5138 -0.8900 29 1 3.9088 0.4215 0.7138 30 1 3.3397 1.8468 1.6850 31 1 5.3166 1.0816 -1.3600 32 1 5.9350 2.1171 -0.0509 33 1 4.9907 3.7795 -2.1296 34 1 9.1689 3.3046 -3.7302 35 1 11.1615 3.5809 -6.3208 36 1 12.1386 3.2674 -4.1639 37 1 12.7874 6.5515 -4.9499 38 1 13.9376 4.6398 -5.9204 39 1 10.4815 6.7317 -7.1030 40 1 5.3132 5.1240 -3.3502 41 1 2.2140 2.3477 -1.9413 42 1 3.1165 0.7740 -1.8410 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_22_12345242_12335884.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 15:47:06 Heat of formation + Delta-G solvation = 18.828787 kcal Electronic energy + Delta-G solvation = -27968.651502 eV Core-core repulsion = 23771.471251 eV Total energy + Delta-G solvation = -4197.180251 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 396.052 amu Computer time = 0.94 seconds Orbital eigenvalues (eV) -44.16050 -41.27317 -40.41757 -38.48969 -38.07048 -37.48402 -35.63670 -35.07441 -32.60950 -31.89454 -30.22543 -29.34680 -27.55152 -26.89926 -26.81466 -25.33757 -24.01431 -23.32742 -22.41579 -21.84407 -20.72658 -19.14539 -18.84049 -18.80921 -17.93712 -17.61298 -17.37936 -17.01877 -16.75797 -16.49833 -16.21513 -16.17580 -15.95080 -15.56905 -15.50651 -15.11288 -14.78288 -14.53809 -14.29806 -14.15602 -13.71544 -13.53661 -13.40168 -13.29448 -13.02600 -12.90908 -12.80556 -12.59769 -12.16971 -12.08822 -11.84929 -11.56306 -11.48881 -11.35764 -11.27072 -11.13833 -10.95278 -10.50483 -10.26110 -9.93500 -8.98423 -5.12204 -0.79690 -0.32382 0.26101 0.90087 1.24959 1.36675 1.51781 1.84447 1.89641 1.98431 2.32727 2.73194 2.76462 2.89620 3.16275 3.34060 3.40960 3.44489 3.51762 3.54716 3.66009 3.69369 3.92218 3.98454 4.07306 4.13783 4.19484 4.31401 4.34966 4.40738 4.48205 4.53079 4.57138 4.61134 4.70473 4.72618 4.75156 4.87417 5.00315 5.03952 5.13151 5.28863 5.32605 5.65672 6.12292 6.20690 6.25245 6.57208 6.98375 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.377 6.377 3 C 0.060 3.940 4 H 0.089 0.911 5 C -0.126 4.126 6 C -0.126 4.126 7 H 0.101 0.899 8 C 0.132 3.868 9 N -0.720 5.720 10 C 0.576 3.424 11 O -0.529 6.529 12 C -0.178 4.178 13 C 0.176 3.824 14 N -0.353 5.353 15 C -0.040 4.040 16 C -0.046 4.046 17 O -0.544 6.544 18 Si 0.714 3.286 19 C 0.048 3.952 20 N -0.459 5.459 21 C 0.242 3.758 22 C -0.064 4.064 23 Br 0.007 6.993 24 C -0.041 4.041 25 C -0.152 4.152 26 H 0.086 0.914 27 H 0.042 0.958 28 H 0.042 0.958 29 H 0.096 0.904 30 H 0.078 0.922 31 H 0.076 0.924 32 H 0.075 0.925 33 H 0.401 0.599 34 H 0.192 0.808 35 H 0.086 0.914 36 H 0.391 0.609 37 H -0.250 1.250 38 H -0.253 1.253 39 H 0.198 0.802 40 H 0.153 0.847 41 H 0.072 0.928 42 H 0.094 0.906 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.483 -0.295 -0.640 1.642 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.295 6.295 3 C 0.002 3.998 4 H 0.107 0.893 5 C -0.164 4.164 6 C -0.145 4.145 7 H 0.119 0.881 8 C 0.010 3.990 9 N -0.372 5.372 10 C 0.362 3.638 11 O -0.407 6.407 12 C -0.186 4.186 13 C 0.049 3.951 14 N -0.026 5.026 15 C -0.151 4.151 16 C -0.155 4.155 17 O -0.353 6.353 18 Si 0.611 3.389 19 C -0.102 4.102 20 N -0.178 5.178 21 C -0.003 4.003 22 C -0.147 4.147 23 Br 0.093 6.907 24 C -0.067 4.067 25 C -0.189 4.189 26 H 0.105 0.895 27 H 0.061 0.939 28 H 0.061 0.939 29 H 0.115 0.885 30 H 0.096 0.904 31 H 0.094 0.906 32 H 0.094 0.906 33 H 0.237 0.763 34 H 0.208 0.792 35 H 0.104 0.896 36 H 0.241 0.759 37 H -0.174 1.174 38 H -0.177 1.177 39 H 0.214 0.786 40 H 0.171 0.829 41 H 0.090 0.910 42 H 0.113 0.887 Dipole moment (debyes) X Y Z Total from point charges -1.324 0.728 -0.623 1.634 hybrid contribution 0.182 -1.363 1.161 1.800 sum -1.142 -0.635 0.538 1.413 Atomic orbital electron populations 1.22816 0.80899 1.03047 1.00008 1.87961 1.19880 1.27130 1.94546 1.23686 0.93912 0.85588 0.96603 0.89313 1.23205 0.95359 1.00189 0.97668 1.22588 0.93553 1.00241 0.98088 0.88076 1.21417 0.94650 0.91458 0.91520 1.45804 1.14966 1.32368 1.44104 1.17477 0.82127 0.83808 0.80377 1.90854 1.50195 1.37190 1.62427 1.19245 0.94562 1.00539 1.04213 1.22097 0.96333 0.90734 0.85899 1.42577 1.12338 1.20390 1.27258 1.20894 0.87896 1.03532 1.02747 1.24472 1.01277 1.01846 0.87863 1.86477 1.49418 1.69262 1.30138 0.94670 0.74046 0.80336 0.89861 1.22350 0.94758 0.92772 1.00302 1.70872 1.06764 1.25585 1.14547 1.20397 0.92022 0.89326 0.98585 1.20419 0.92262 0.99814 1.02168 1.96845 1.54049 1.47781 1.92034 1.21065 0.99716 0.91450 0.94471 1.23642 0.97053 1.01080 0.97169 0.89510 0.93895 0.93945 0.88520 0.90357 0.90554 0.90629 0.76301 0.79164 0.89595 0.75933 1.17394 1.17709 0.78576 0.82899 0.90954 0.88749 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.85 101.05 1.10 1.07 16 2 O -0.38 -0.49 10.71 -35.23 -0.38 -0.86 16 3 C 0.06 -0.07 4.31 -25.92 -0.11 -0.18 16 4 H 0.09 -0.21 7.87 -51.93 -0.41 -0.62 16 5 C -0.13 0.23 7.47 -25.93 -0.19 0.03 16 6 C -0.13 0.36 3.75 -89.81 -0.34 0.03 16 7 H 0.10 -0.42 8.14 -51.93 -0.42 -0.84 16 8 C 0.13 -0.17 5.51 -4.04 -0.02 -0.19 16 9 N -0.72 0.94 5.51 -61.33 -0.34 0.60 16 10 C 0.58 0.94 7.76 -12.45 -0.10 0.84 16 11 O -0.53 -2.71 16.27 5.28 0.09 -2.62 16 12 C -0.18 -0.19 5.84 -105.37 -0.61 -0.81 16 13 C 0.18 0.39 9.91 -16.36 -0.16 0.23 16 14 N -0.35 -1.01 2.93 -58.09 -0.17 -1.18 16 15 C -0.04 -0.06 6.28 -81.43 -0.51 -0.57 16 16 C -0.05 0.06 3.05 36.01 0.11 0.17 16 17 O -0.54 0.19 10.87 -35.23 -0.38 -0.19 16 18 Si 0.71 -1.72 31.18 -169.99 -5.30 -7.02 16 19 C 0.05 0.06 10.44 -17.94 -0.19 -0.13 16 20 N -0.46 -1.87 11.30 -12.70 -0.14 -2.02 16 21 C 0.24 0.89 7.59 -155.91 -1.18 -0.29 16 22 C -0.06 -0.13 6.24 -39.35 -0.25 -0.37 16 23 Br 0.01 0.01 33.72 -68.01 -2.29 -2.28 16 24 C -0.04 0.01 9.26 -39.14 -0.36 -0.35 16 25 C -0.15 0.31 7.46 -25.92 -0.19 0.11 16 26 H 0.09 -0.14 8.14 -51.93 -0.42 -0.56 16 27 H 0.04 -0.08 8.14 -51.93 -0.42 -0.50 16 28 H 0.04 -0.07 8.14 -51.93 -0.42 -0.50 16 29 H 0.10 -0.09 8.10 -51.93 -0.42 -0.51 16 30 H 0.08 -0.19 8.14 -51.93 -0.42 -0.61 16 31 H 0.08 -0.01 7.84 -51.93 -0.41 -0.42 16 32 H 0.08 -0.04 8.14 -51.93 -0.42 -0.46 16 33 H 0.40 -1.55 6.51 -40.82 -0.27 -1.81 16 34 H 0.19 0.42 6.18 -52.48 -0.32 0.09 16 35 H 0.09 -0.27 7.96 -51.93 -0.41 -0.68 16 36 H 0.39 -1.70 8.74 45.56 0.40 -1.31 16 37 H -0.25 -0.40 7.11 56.52 0.40 0.01 16 38 H -0.25 0.18 7.11 56.52 0.40 0.58 16 39 H 0.20 -0.58 6.90 -52.49 -0.36 -0.94 16 40 H 0.15 -0.54 6.44 -52.48 -0.34 -0.87 16 41 H 0.07 -0.21 8.14 -51.93 -0.42 -0.63 16 42 H 0.09 -0.07 7.90 -51.93 -0.41 -0.48 16 LS Contribution 373.88 15.07 5.63 5.63 Total: 0.00 -10.03 373.88 -11.41 -21.44 By element: Atomic # 1 Polarization: -5.97 SS G_CDS: -5.11 Total: -11.08 kcal Atomic # 6 Polarization: 2.59 SS G_CDS: -3.02 Total: -0.42 kcal Atomic # 7 Polarization: -1.95 SS G_CDS: -0.65 Total: -2.60 kcal Atomic # 8 Polarization: -3.00 SS G_CDS: -0.67 Total: -3.68 kcal Atomic # 14 Polarization: -1.72 SS G_CDS: -5.30 Total: -7.02 kcal Atomic # 35 Polarization: 0.01 SS G_CDS: -2.29 Total: -2.28 kcal Total LS contribution 5.63 Total: 5.63 kcal Total: -10.03 -11.41 -21.44 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_12345242_12335884.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 40.273 kcal (2) G-P(sol) polarization free energy of solvation -10.034 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 30.239 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.410 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.444 kcal (6) G-S(sol) free energy of system = (1) + (5) 18.829 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.94 seconds