Wall clock time and date at job start Thu Mar 4 2021 15:47:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42892 * 1 3 3 C 1.42903 * 114.00058 * 2 1 4 4 H 1.09004 * 112.90318 * 18.74423 * 3 2 1 5 5 C 1.53771 * 113.61878 * 149.99887 * 3 2 1 6 6 C 1.53778 * 87.08281 * 139.97946 * 5 3 2 7 7 H 1.09005 * 113.61305 * 89.20595 * 6 5 3 8 8 C 1.52999 * 113.61697 * 220.01519 * 6 5 3 9 9 N 1.46505 * 109.47192 * 185.00105 * 8 6 5 10 10 C 1.34777 * 119.99724 * 180.02562 * 9 8 6 11 11 O 1.21593 * 120.00265 * 359.97438 * 10 9 8 12 12 C 1.47579 * 119.99797 * 179.72717 * 10 9 8 13 13 C 1.36491 * 120.01069 * 179.97438 * 12 10 9 14 14 N 1.35945 * 120.50793 * 179.76151 * 13 12 10 15 15 C 1.36996 * 132.41819 * 180.22279 * 14 13 12 16 16 C 1.50702 * 126.42771 * 0.25886 * 15 14 13 17 17 O 1.42900 * 109.46900 * 330.00360 * 16 15 14 18 18 Si 1.86298 * 109.47208 * 209.99904 * 16 15 14 19 19 C 1.35001 * 107.14403 * 180.26289 * 15 14 13 20 20 N 1.33585 * 108.65952 * 359.97438 * 19 15 14 21 21 C 1.32417 * 109.21790 * 0.02562 * 20 19 15 22 22 C 1.41251 * 132.11329 * 180.02562 * 21 20 19 23 23 Br 1.89093 * 120.25735 * 359.93699 * 22 21 20 24 24 C 1.35702 * 119.48841 * 179.97438 * 22 21 20 25 25 C 1.53781 * 87.08260 * 334.56939 * 6 5 3 26 26 H 1.09004 * 109.47125 * 179.97438 * 1 2 3 27 27 H 1.08995 * 109.47407 * 299.99830 * 1 2 3 28 28 H 1.09001 * 109.47489 * 60.00227 * 1 2 3 29 29 H 1.08997 * 113.61625 * 25.43301 * 5 3 2 30 30 H 1.08999 * 113.69408 * 254.54157 * 5 3 2 31 31 H 1.09003 * 109.46803 * 65.00774 * 8 6 5 32 32 H 1.08993 * 109.47533 * 305.00493 * 8 6 5 33 33 H 0.97000 * 119.99792 * 0.02562 * 9 8 6 34 34 H 1.08005 * 119.74677 * 359.97438 * 13 12 10 35 35 H 1.08998 * 109.46641 * 90.00007 * 16 15 14 36 36 H 0.96708 * 113.99773 * 179.97438 * 17 16 15 37 37 H 1.48504 * 109.99876 * 60.00300 * 18 16 15 38 38 H 1.48498 * 109.99845 * 181.32099 * 18 16 15 39 39 H 1.08000 * 125.67560 * 179.97438 * 19 15 14 40 40 H 1.08003 * 120.23544 * 180.02562 * 24 22 21 41 41 H 1.08997 * 113.61436 * 139.98102 * 25 6 5 42 42 H 1.09000 * 113.61276 * 270.88320 * 25 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 1 1.3141 2.0798 0.3227 5 6 3.3754 1.3720 0.7045 6 6 3.8226 2.3182 -0.4223 7 1 3.6234 3.3695 -0.2144 8 6 5.2542 2.0681 -0.9007 9 7 5.6259 3.0888 -1.8837 10 6 6.8504 3.0681 -2.4464 11 8 7.6468 2.2026 -2.1379 12 6 7.2227 4.0927 -3.4411 13 6 8.4629 4.0723 -4.0108 14 7 8.8149 5.0083 -4.9317 15 6 9.9651 5.2144 -5.6468 16 6 11.2195 4.3816 -5.5835 17 8 11.3513 3.8176 -4.2772 18 14 12.6972 5.4558 -5.9483 19 6 9.7640 6.3036 -6.4187 20 7 8.5300 6.7638 -6.1954 21 6 7.9341 5.9950 -5.2969 22 6 6.6469 6.0392 -4.7169 23 35 5.4247 7.3945 -5.2119 24 6 6.2944 5.1019 -3.8010 25 6 2.7533 1.6489 -1.3018 26 1 -0.3633 -1.0277 -0.0005 27 1 -0.3634 0.5138 0.8899 28 1 -0.3634 0.5138 -0.8900 29 1 3.9088 0.4215 0.7138 30 1 3.3397 1.8468 1.6850 31 1 5.3166 1.0816 -1.3600 32 1 5.9350 2.1171 -0.0509 33 1 4.9907 3.7795 -2.1296 34 1 9.1689 3.3046 -3.7302 35 1 11.1615 3.5809 -6.3208 36 1 12.1386 3.2674 -4.1639 37 1 12.7874 6.5515 -4.9499 38 1 13.9376 4.6398 -5.9204 39 1 10.4815 6.7317 -7.1030 40 1 5.3132 5.1240 -3.3502 41 1 2.2140 2.3477 -1.9413 42 1 3.1165 0.7740 -1.8410 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_12345242_12335884.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 15:47:05 Heat of formation + Delta-G solvation = 18.063267 kcal Electronic energy + Delta-G solvation = -27968.684697 eV Core-core repulsion = 23771.471251 eV Total energy + Delta-G solvation = -4197.213446 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 396.052 amu Computer time = 0.93 seconds Orbital eigenvalues (eV) -44.24735 -41.32911 -40.36511 -38.51823 -38.05213 -37.46504 -35.69912 -35.14663 -32.69715 -31.93410 -30.29787 -29.30576 -27.46758 -26.88637 -26.66939 -25.38945 -24.07768 -23.25225 -22.49376 -21.90683 -20.60844 -19.19578 -18.86627 -18.75989 -17.97171 -17.56068 -17.44774 -17.08261 -16.68913 -16.47403 -16.19843 -16.14383 -15.94027 -15.59254 -15.54684 -15.08843 -14.79890 -14.59543 -14.27495 -14.12107 -13.62176 -13.40809 -13.39098 -13.35072 -13.04318 -12.89236 -12.84255 -12.44395 -12.16606 -12.00271 -11.73344 -11.58620 -11.46826 -11.40742 -11.36718 -11.26256 -10.91321 -10.41394 -10.31114 -9.99376 -9.05298 -4.95140 -0.90606 -0.38472 0.18257 0.94700 1.17502 1.38922 1.63547 1.78624 1.93177 1.99576 2.21413 2.77557 2.88699 2.95287 3.15119 3.36276 3.40482 3.51385 3.52845 3.62336 3.82345 3.84345 3.94395 4.09409 4.16251 4.29634 4.31113 4.31684 4.44917 4.47255 4.49661 4.55086 4.66676 4.74360 4.83493 4.84457 4.87914 4.96970 5.02942 5.12646 5.21049 5.30899 5.40643 5.56261 6.27628 6.32706 6.41055 6.47369 6.93934 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.024 3.976 2 O -0.406 6.406 3 C 0.052 3.948 4 H 0.105 0.895 5 C -0.130 4.130 6 C -0.109 4.109 7 H 0.125 0.875 8 C 0.133 3.867 9 N -0.703 5.703 10 C 0.577 3.423 11 O -0.570 6.570 12 C -0.173 4.173 13 C 0.164 3.836 14 N -0.360 5.360 15 C -0.052 4.052 16 C -0.056 4.056 17 O -0.565 6.565 18 Si 0.810 3.190 19 C 0.041 3.959 20 N -0.490 5.490 21 C 0.221 3.779 22 C -0.081 4.081 23 Br 0.009 6.991 24 C -0.025 4.025 25 C -0.150 4.150 26 H 0.087 0.913 27 H 0.051 0.949 28 H 0.049 0.951 29 H 0.081 0.919 30 H 0.087 0.913 31 H 0.062 0.938 32 H 0.069 0.931 33 H 0.416 0.584 34 H 0.186 0.814 35 H 0.109 0.891 36 H 0.406 0.594 37 H -0.307 1.307 38 H -0.271 1.271 39 H 0.231 0.769 40 H 0.187 0.813 41 H 0.086 0.914 42 H 0.077 0.923 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.171 0.240 -0.845 2.342 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.072 4.072 2 O -0.325 6.325 3 C -0.005 4.005 4 H 0.123 0.877 5 C -0.168 4.168 6 C -0.127 4.127 7 H 0.143 0.857 8 C 0.010 3.990 9 N -0.355 5.355 10 C 0.363 3.637 11 O -0.450 6.450 12 C -0.181 4.181 13 C 0.037 3.963 14 N -0.033 5.033 15 C -0.163 4.163 16 C -0.163 4.163 17 O -0.377 6.377 18 Si 0.711 3.289 19 C -0.108 4.108 20 N -0.209 5.209 21 C -0.024 4.024 22 C -0.163 4.163 23 Br 0.094 6.906 24 C -0.051 4.051 25 C -0.188 4.188 26 H 0.106 0.894 27 H 0.070 0.930 28 H 0.068 0.932 29 H 0.100 0.900 30 H 0.105 0.895 31 H 0.081 0.919 32 H 0.087 0.913 33 H 0.255 0.745 34 H 0.203 0.797 35 H 0.127 0.873 36 H 0.259 0.741 37 H -0.235 1.235 38 H -0.197 1.197 39 H 0.247 0.753 40 H 0.205 0.795 41 H 0.105 0.895 42 H 0.096 0.904 Dipole moment (debyes) X Y Z Total from point charges -2.052 1.252 -0.844 2.547 hybrid contribution 0.404 -1.556 1.288 2.060 sum -1.648 -0.305 0.444 1.733 Atomic orbital electron populations 1.22922 0.80012 1.03456 1.00781 1.87924 1.21083 1.28726 1.94746 1.23904 0.94273 0.85173 0.97196 0.87730 1.23220 0.95161 0.99931 0.98519 1.22525 0.91913 1.01219 0.97088 0.85708 1.21402 0.95672 0.90832 0.91071 1.45696 1.14223 1.32383 1.43157 1.17566 0.82494 0.83337 0.80298 1.90836 1.51559 1.38771 1.63829 1.19259 0.94498 1.00576 1.03778 1.22159 0.96896 0.90857 0.86348 1.42723 1.12736 1.20356 1.27457 1.21466 0.88383 1.03984 1.02456 1.24806 1.00680 1.02788 0.88059 1.86442 1.50708 1.69814 1.30734 0.93597 0.71638 0.76181 0.87464 1.22983 0.94553 0.92618 1.00634 1.70842 1.08102 1.26532 1.15392 1.20740 0.92844 0.89772 0.99084 1.20577 0.92051 1.00640 1.03042 1.96825 1.53607 1.47947 1.92190 1.21353 1.00573 0.89869 0.93279 1.23597 0.97246 1.00846 0.97089 0.89422 0.93032 0.93201 0.89992 0.89466 0.91941 0.91289 0.74513 0.79671 0.87328 0.74139 1.23527 1.19720 0.75300 0.79545 0.89497 0.90408 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.05 10.85 113.37 1.23 1.18 16 2 O -0.41 -1.17 10.71 -148.98 -1.60 -2.77 16 3 C 0.05 -0.15 4.31 31.12 0.13 -0.01 16 4 H 0.10 -0.66 7.87 -2.38 -0.02 -0.68 16 5 C -0.13 0.49 7.47 31.12 0.23 0.73 16 6 C -0.11 0.74 3.75 -10.27 -0.04 0.70 16 7 H 0.12 -1.37 8.14 -2.38 -0.02 -1.39 16 8 C 0.13 -0.34 5.51 86.38 0.48 0.14 16 9 N -0.70 2.31 5.51 -466.21 -2.57 -0.26 16 10 C 0.58 2.06 7.76 86.71 0.67 2.73 16 11 O -0.57 -6.58 16.27 -4.01 -0.07 -6.64 16 12 C -0.17 -0.43 5.84 -20.35 -0.12 -0.55 16 13 C 0.16 0.90 9.91 83.65 0.83 1.73 16 14 N -0.36 -2.39 2.93 -337.71 -0.99 -3.38 16 15 C -0.05 -0.18 6.28 41.01 0.26 0.08 16 16 C -0.06 0.14 3.05 71.24 0.22 0.36 16 17 O -0.57 0.07 10.87 -148.98 -1.62 -1.55 16 18 Si 0.81 -4.03 31.18 68.60 2.14 -1.89 16 19 C 0.04 0.11 10.44 83.68 0.87 0.99 16 20 N -0.49 -4.34 11.30 -194.10 -2.19 -6.54 16 21 C 0.22 1.79 7.59 134.18 1.02 2.81 16 22 C -0.08 -0.33 6.24 22.42 0.14 -0.19 16 23 Br 0.01 0.03 33.72 -20.37 -0.69 -0.66 16 24 C -0.03 0.02 9.26 22.55 0.21 0.23 16 25 C -0.15 0.71 7.46 31.12 0.23 0.94 16 26 H 0.09 -0.26 8.14 -2.38 -0.02 -0.28 16 27 H 0.05 -0.22 8.14 -2.39 -0.02 -0.24 16 28 H 0.05 -0.20 8.14 -2.39 -0.02 -0.22 16 29 H 0.08 -0.06 8.10 -2.39 -0.02 -0.08 16 30 H 0.09 -0.49 8.14 -2.39 -0.02 -0.51 16 31 H 0.06 0.05 7.84 -2.39 -0.02 0.03 16 32 H 0.07 -0.04 8.14 -2.39 -0.02 -0.06 16 33 H 0.42 -4.01 6.51 -92.71 -0.60 -4.61 16 34 H 0.19 1.13 6.18 -2.91 -0.02 1.12 16 35 H 0.11 -0.78 7.96 -2.39 -0.02 -0.80 16 36 H 0.41 -3.42 8.74 -74.05 -0.65 -4.07 16 37 H -0.31 -1.45 7.11 99.48 0.71 -0.74 16 38 H -0.27 0.53 7.11 99.48 0.71 1.24 16 39 H 0.23 -1.50 6.90 -2.91 -0.02 -1.52 16 40 H 0.19 -1.68 6.44 -2.91 -0.02 -1.70 16 41 H 0.09 -0.65 8.14 -2.39 -0.02 -0.67 16 42 H 0.08 -0.08 7.90 -2.39 -0.02 -0.10 16 Total: 0.00 -25.75 373.88 -1.34 -27.09 By element: Atomic # 1 Polarization: -15.15 SS G_CDS: -0.12 Total: -15.27 kcal Atomic # 6 Polarization: 5.51 SS G_CDS: 6.36 Total: 11.87 kcal Atomic # 7 Polarization: -4.43 SS G_CDS: -5.75 Total: -10.18 kcal Atomic # 8 Polarization: -7.68 SS G_CDS: -3.28 Total: -10.96 kcal Atomic # 14 Polarization: -4.03 SS G_CDS: 2.14 Total: -1.89 kcal Atomic # 35 Polarization: 0.03 SS G_CDS: -0.69 Total: -0.66 kcal Total: -25.75 -1.34 -27.09 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_12345242_12335884.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 45.158 kcal (2) G-P(sol) polarization free energy of solvation -25.754 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 19.404 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.341 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.095 kcal (6) G-S(sol) free energy of system = (1) + (5) 18.063 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.93 seconds