Wall clock time and date at job start Thu Mar 4 2021 13:46:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46512 * 1 3 3 N 1.28467 * 124.88042 * 2 1 4 4 C 1.31808 * 110.06875 * 180.16169 * 3 2 1 5 5 C 1.47717 * 126.51310 * 179.82361 * 4 3 2 6 6 O 1.21576 * 119.99364 * 179.69053 * 5 4 3 7 7 N 1.34771 * 120.00446 * 359.69229 * 5 4 3 8 8 C 1.46495 * 120.00423 * 180.02562 * 7 5 4 9 9 H 1.09009 * 109.46976 * 324.99618 * 8 7 5 10 10 C 1.52993 * 109.47597 * 84.99441 * 8 7 5 11 11 C 1.53000 * 109.47512 * 180.02562 * 10 8 7 12 12 C 1.52995 * 109.46898 * 299.99835 * 11 10 8 13 13 H 1.09002 * 109.47544 * 299.99985 * 12 11 10 14 14 N 1.46499 * 109.47258 * 179.97438 * 12 11 10 15 15 C 1.34784 * 119.99893 * 85.00288 * 14 12 11 16 16 O 1.21507 * 119.99927 * 0.02562 * 15 14 12 17 17 O 1.34634 * 119.99829 * 179.72952 * 15 14 12 18 18 C 1.45201 * 116.99818 * 180.02562 * 17 15 14 19 19 C 1.53001 * 109.46978 * 59.99497 * 18 17 15 20 20 C 1.52998 * 109.47141 * 179.97438 * 18 17 15 21 21 C 1.53000 * 109.47167 * 299.99716 * 18 17 15 22 22 C 1.53004 * 109.46864 * 60.00173 * 12 11 10 23 23 C 1.52997 * 109.47331 * 205.00058 * 8 7 5 24 24 C 1.41495 * 106.96695 * 359.56307 * 4 3 2 25 25 C 1.35026 * 124.88412 * 179.67079 * 2 1 3 26 26 C 1.50696 * 126.39158 * 0.03888 * 25 2 1 27 27 O 1.42908 * 109.46794 * 330.00362 * 26 25 2 28 28 Si 1.86302 * 109.47434 * 210.00207 * 26 25 2 29 29 H 1.09001 * 109.46585 * 270.33099 * 1 2 3 30 30 H 1.08991 * 109.47306 * 30.33331 * 1 2 3 31 31 H 1.08999 * 109.46456 * 150.33277 * 1 2 3 32 32 H 0.97006 * 120.00170 * 359.97438 * 7 5 4 33 33 H 1.09008 * 109.47625 * 300.00431 * 10 8 7 34 34 H 1.08997 * 109.47189 * 60.00175 * 10 8 7 35 35 H 1.09003 * 109.47050 * 180.02562 * 11 10 8 36 36 H 1.09002 * 109.47010 * 60.00146 * 11 10 8 37 37 H 0.97005 * 120.00261 * 265.00500 * 14 12 11 38 38 H 1.09001 * 109.46839 * 60.00396 * 19 18 17 39 39 H 1.09003 * 109.46834 * 179.97438 * 19 18 17 40 40 H 1.08998 * 109.47606 * 299.99735 * 19 18 17 41 41 H 1.09001 * 109.46982 * 59.99892 * 20 18 17 42 42 H 1.09004 * 109.46956 * 180.02562 * 20 18 17 43 43 H 1.09001 * 109.47443 * 300.00074 * 20 18 17 44 44 H 1.09002 * 109.47011 * 59.99915 * 21 18 17 45 45 H 1.08994 * 109.47249 * 179.97438 * 21 18 17 46 46 H 1.09001 * 109.47037 * 300.00158 * 21 18 17 47 47 H 1.08997 * 109.47519 * 59.99913 * 22 12 11 48 48 H 1.09009 * 109.47062 * 179.97438 * 22 12 11 49 49 H 1.08994 * 109.47626 * 59.99673 * 23 8 7 50 50 H 1.09002 * 109.47045 * 299.99457 * 23 8 7 51 51 H 1.07996 * 127.25103 * 180.26148 * 24 4 3 52 52 H 1.08997 * 109.47258 * 89.99821 * 26 25 2 53 53 H 0.96700 * 113.99864 * 299.99699 * 27 26 25 54 54 H 1.48503 * 109.99742 * 58.67797 * 28 26 25 55 55 H 1.48501 * 110.00086 * 179.97438 * 28 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4651 0.0000 0.0000 3 7 2.1998 1.0539 0.0000 4 6 3.4741 0.7169 -0.0035 5 6 4.6273 1.6400 -0.0083 6 8 5.7597 1.1978 -0.0056 7 7 4.4241 2.9723 -0.0158 8 6 5.5678 3.8877 -0.0211 9 1 6.3776 3.4609 0.5707 10 6 6.0444 4.1002 -1.4593 11 6 7.2392 5.0558 -1.4649 12 6 6.8210 6.3986 -0.8627 13 1 6.0114 6.8258 -1.4543 14 7 7.9652 7.3135 -0.8673 15 6 8.2425 8.0402 -1.9681 16 8 7.5431 7.9369 -2.9564 17 8 9.2908 8.8850 -1.9705 18 6 9.5294 9.6358 -3.1902 19 6 8.3056 10.4981 -3.5059 20 6 10.7526 10.5358 -3.0040 21 6 9.7811 8.6651 -4.3457 22 6 6.3445 6.1862 0.5757 23 6 5.1491 5.2305 0.5810 24 6 3.5273 -0.6970 0.0044 25 6 2.2374 -1.1076 0.0064 26 6 1.7536 -2.5348 0.0137 27 8 0.4952 -2.6077 0.6871 28 14 2.9943 -3.6066 0.8985 29 1 -0.3632 0.0059 1.0277 30 1 -0.3633 0.8869 -0.5190 31 1 -0.3632 -0.8930 -0.5087 32 1 3.5205 3.3251 -0.0183 33 1 6.3427 3.1435 -1.8884 34 1 5.2347 4.5270 -2.0511 35 1 7.5784 5.2074 -2.4896 36 1 8.0489 4.6285 -0.8732 37 1 8.5233 7.3962 -0.0783 38 1 8.1264 11.1897 -2.6827 39 1 8.4850 11.0621 -4.4213 40 1 7.4339 9.8573 -3.6385 41 1 11.6246 9.9218 -2.7788 42 1 10.9314 11.0998 -3.9195 43 1 10.5729 11.2274 -2.1809 44 1 8.9094 8.0242 -4.4782 45 1 9.9598 9.2287 -5.2614 46 1 10.6529 8.0507 -4.1208 47 1 7.1541 5.7590 1.1674 48 1 6.0469 7.1430 1.0049 49 1 4.8096 5.0792 1.6056 50 1 4.3393 5.6574 -0.0107 51 1 4.4109 -1.3179 0.0082 52 1 1.6375 -2.8844 -1.0121 53 1 0.5236 -2.3113 1.6071 54 1 3.1853 -3.1207 2.2887 55 1 2.5285 -5.0166 0.9131 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_12463208_13259642.mol2 55 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:46:09 Heat of formation + Delta-G solvation = -76.822531 kcal Electronic energy + Delta-G solvation = -35583.976359 eV Core-core repulsion = 30817.122441 eV Total energy + Delta-G solvation = -4766.853918 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 381.214 amu Computer time = 1.54 seconds Orbital eigenvalues (eV) -43.83980 -41.90595 -40.95853 -39.56037 -38.17717 -37.96549 -36.08582 -35.13526 -34.47617 -33.78702 -32.59151 -31.87662 -29.81022 -28.37710 -28.31483 -28.27989 -26.75209 -24.90861 -24.00419 -23.62696 -22.36162 -22.11104 -21.48066 -21.07820 -20.60098 -19.32910 -18.99891 -17.80685 -17.65669 -17.54721 -17.41511 -17.17100 -17.03452 -16.63203 -16.14152 -15.86457 -15.72096 -15.64071 -15.47746 -15.25545 -15.06998 -14.88732 -14.79582 -14.52017 -14.14958 -14.06806 -13.76249 -13.60011 -13.40474 -13.35599 -13.28975 -13.15049 -12.92827 -12.87348 -12.80383 -12.69129 -12.63558 -12.37433 -12.30075 -12.25322 -12.17374 -12.00088 -11.54687 -11.53645 -11.39001 -11.28252 -11.09593 -11.07064 -10.31768 -10.18484 -9.99946 -9.97340 -4.89197 0.44586 0.82465 1.15564 1.22508 1.54553 1.67093 1.75994 1.93940 2.11204 2.31554 3.09150 3.12819 3.31977 3.35264 3.59635 3.61761 3.73802 3.78866 3.93758 3.94567 3.97381 4.09833 4.12830 4.29678 4.30967 4.34588 4.35959 4.42561 4.44995 4.49501 4.53179 4.60222 4.61983 4.65374 4.69847 4.70920 4.74148 4.75561 4.83826 4.86845 4.94702 5.05240 5.08512 5.09813 5.10285 5.20861 5.24280 5.26203 5.27367 5.30750 5.42055 5.47257 5.60089 5.67407 6.27558 6.39972 6.41099 6.82160 7.13190 7.35280 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.078 3.922 2 N -0.265 5.265 3 N -0.265 5.265 4 C -0.041 4.041 5 C 0.604 3.396 6 O -0.563 6.563 7 N -0.704 5.704 8 C 0.146 3.854 9 H 0.082 0.918 10 C -0.119 4.119 11 C -0.121 4.121 12 C 0.165 3.835 13 H 0.080 0.920 14 N -0.697 5.697 15 C 0.643 3.357 16 O -0.593 6.593 17 O -0.370 6.370 18 C 0.127 3.873 19 C -0.179 4.179 20 C -0.138 4.138 21 C -0.180 4.180 22 C -0.114 4.114 23 C -0.115 4.115 24 C -0.187 4.187 25 C -0.014 4.014 26 C -0.044 4.044 27 O -0.537 6.537 28 Si 0.782 3.218 29 H 0.100 0.900 30 H 0.101 0.899 31 H 0.116 0.884 32 H 0.414 0.586 33 H 0.053 0.947 34 H 0.069 0.931 35 H 0.051 0.949 36 H 0.073 0.927 37 H 0.417 0.583 38 H 0.062 0.938 39 H 0.086 0.914 40 H 0.064 0.936 41 H 0.068 0.932 42 H 0.098 0.902 43 H 0.070 0.930 44 H 0.063 0.937 45 H 0.086 0.914 46 H 0.060 0.940 47 H 0.087 0.913 48 H 0.092 0.908 49 H 0.091 0.909 50 H 0.082 0.918 51 H 0.181 0.819 52 H 0.145 0.855 53 H 0.388 0.612 54 H -0.294 1.294 55 H -0.283 1.283 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.533 1.027 2.409 3.643 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.061 4.061 2 N -0.054 5.054 3 N -0.103 5.103 4 C -0.199 4.199 5 C 0.390 3.610 6 O -0.441 6.441 7 N -0.355 5.355 8 C 0.042 3.958 9 H 0.100 0.900 10 C -0.158 4.158 11 C -0.160 4.160 12 C 0.061 3.939 13 H 0.098 0.902 14 N -0.356 5.356 15 C 0.397 3.603 16 O -0.484 6.484 17 O -0.285 6.285 18 C 0.091 3.909 19 C -0.237 4.237 20 C -0.195 4.195 21 C -0.237 4.237 22 C -0.153 4.153 23 C -0.153 4.153 24 C -0.215 4.215 25 C -0.139 4.139 26 C -0.155 4.155 27 O -0.345 6.345 28 Si 0.685 3.315 29 H 0.119 0.881 30 H 0.120 0.880 31 H 0.134 0.866 32 H 0.251 0.749 33 H 0.072 0.928 34 H 0.088 0.912 35 H 0.070 0.930 36 H 0.092 0.908 37 H 0.254 0.746 38 H 0.081 0.919 39 H 0.105 0.895 40 H 0.083 0.917 41 H 0.088 0.912 42 H 0.116 0.884 43 H 0.089 0.911 44 H 0.082 0.918 45 H 0.105 0.895 46 H 0.079 0.921 47 H 0.105 0.895 48 H 0.110 0.890 49 H 0.109 0.891 50 H 0.101 0.899 51 H 0.198 0.802 52 H 0.163 0.837 53 H 0.238 0.762 54 H -0.221 1.221 55 H -0.210 1.210 Dipole moment (debyes) X Y Z Total from point charges -2.929 0.927 1.982 3.656 hybrid contribution -0.549 -0.083 0.676 0.875 sum -3.478 0.844 2.657 4.457 Atomic orbital electron populations 1.22610 0.70759 1.06705 1.06033 1.45694 1.08985 1.01915 1.48813 1.73463 1.02734 1.14714 1.19359 1.21855 0.90934 0.94538 1.12554 1.17034 0.86335 0.82170 0.75491 1.90789 1.23729 1.77733 1.51806 1.45847 1.11157 1.04687 1.73786 1.21106 0.88493 0.89888 0.96354 0.89998 1.21783 0.98065 0.99048 0.96939 1.21821 0.98313 0.94746 1.01147 1.21042 0.86558 0.87721 0.98531 0.90203 1.44817 1.33134 1.43177 1.14478 1.18374 0.79640 0.78425 0.83882 1.90903 1.52625 1.70537 1.34312 1.86311 1.46515 1.52962 1.42679 1.22340 0.97091 0.90568 0.80904 1.22471 0.98085 0.99990 1.03117 1.21890 0.94712 0.98592 1.04271 1.22469 1.02631 1.00199 0.98420 1.21727 0.98709 1.01040 0.93807 1.21712 0.98512 0.92313 1.02766 1.21719 0.97426 0.93540 1.08827 1.22177 0.91008 0.92095 1.08614 1.24843 0.93411 0.92062 1.05135 1.86583 1.29275 1.88392 1.30235 0.93226 0.83995 0.74840 0.79478 0.88117 0.88026 0.86572 0.74922 0.92843 0.91228 0.93006 0.90806 0.74614 0.91877 0.89547 0.91746 0.91246 0.88353 0.91110 0.91850 0.89497 0.92058 0.89468 0.88951 0.89087 0.89936 0.80160 0.83736 0.76201 1.22077 1.21002 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 -0.52 10.13 127.76 1.29 0.77 16 2 N -0.26 -0.09 3.70 -355.91 -1.32 -1.41 16 3 N -0.26 -1.11 11.67 -48.18 -0.56 -1.67 16 4 C -0.04 -0.27 7.13 42.46 0.30 0.04 16 5 C 0.60 4.90 7.79 86.75 0.68 5.58 16 6 O -0.56 -8.00 16.59 -3.95 -0.07 -8.06 16 7 N -0.70 -1.47 5.07 -445.54 -2.26 -3.73 16 8 C 0.15 0.02 2.45 44.99 0.11 0.13 16 9 H 0.08 0.25 7.58 -2.38 -0.02 0.23 16 10 C -0.12 -0.28 5.49 30.59 0.17 -0.11 16 11 C -0.12 -0.23 5.49 30.59 0.17 -0.06 16 12 C 0.16 -0.10 2.45 44.99 0.11 0.01 16 13 H 0.08 0.22 7.58 -2.39 -0.02 0.20 16 14 N -0.70 -0.49 5.08 -570.12 -2.90 -3.39 16 15 C 0.64 4.64 8.02 129.79 1.04 5.68 16 16 O -0.59 -7.43 11.54 19.82 0.23 -7.20 16 17 O -0.37 -2.25 9.94 -55.43 -0.55 -2.80 16 18 C 0.13 0.46 1.13 -10.79 -0.01 0.45 16 19 C -0.18 -0.66 8.37 71.98 0.60 -0.06 16 20 C -0.14 0.21 8.85 71.98 0.64 0.84 16 21 C -0.18 -0.76 8.37 71.98 0.60 -0.16 16 22 C -0.11 0.70 5.39 30.61 0.17 0.86 16 23 C -0.11 0.63 5.39 30.61 0.17 0.79 16 24 C -0.19 -0.63 9.35 22.41 0.21 -0.42 16 25 C -0.01 0.00 6.18 41.40 0.26 0.26 16 26 C -0.04 0.20 2.87 71.23 0.20 0.41 16 27 O -0.54 2.52 10.40 -148.98 -1.55 0.97 16 28 Si 0.78 -2.78 31.24 68.60 2.14 -0.63 16 29 H 0.10 -0.98 8.14 -2.39 -0.02 -1.00 16 30 H 0.10 -0.80 8.14 -2.39 -0.02 -0.82 16 31 H 0.12 -0.93 6.77 -2.39 -0.02 -0.95 16 32 H 0.41 -0.47 8.33 -92.70 -0.77 -1.24 16 33 H 0.05 0.37 8.14 -2.38 -0.02 0.35 16 34 H 0.07 0.15 8.14 -2.39 -0.02 0.13 16 35 H 0.05 0.35 8.14 -2.39 -0.02 0.33 16 36 H 0.07 0.09 8.14 -2.39 -0.02 0.07 16 37 H 0.42 -1.67 8.71 -92.70 -0.81 -2.48 16 38 H 0.06 0.18 8.14 -2.39 -0.02 0.16 16 39 H 0.09 0.02 8.14 -2.39 -0.02 0.00 16 40 H 0.06 0.58 5.87 -2.39 -0.01 0.56 16 41 H 0.07 -0.11 8.14 -2.39 -0.02 -0.13 16 42 H 0.10 -0.47 8.14 -2.39 -0.02 -0.49 16 43 H 0.07 -0.13 8.14 -2.39 -0.02 -0.15 16 44 H 0.06 0.61 5.89 -2.39 -0.01 0.60 16 45 H 0.09 0.06 8.14 -2.39 -0.02 0.04 16 46 H 0.06 0.23 8.14 -2.39 -0.02 0.21 16 47 H 0.09 -0.66 8.14 -2.39 -0.02 -0.68 16 48 H 0.09 -0.72 8.14 -2.38 -0.02 -0.74 16 49 H 0.09 -0.63 8.14 -2.39 -0.02 -0.65 16 50 H 0.08 -0.53 8.14 -2.39 -0.02 -0.55 16 51 H 0.18 0.02 7.03 -2.91 -0.02 0.00 16 52 H 0.15 -1.05 7.96 -2.39 -0.02 -1.07 16 53 H 0.39 -3.53 8.70 -74.06 -0.64 -4.18 16 54 H -0.29 -0.85 7.11 99.48 0.71 -0.14 16 55 H -0.28 -0.63 7.11 99.48 0.71 0.08 16 Total: 0.00 -23.84 437.14 -1.39 -25.22 By element: Atomic # 1 Polarization: -11.04 SS G_CDS: -1.26 Total: -12.30 kcal Atomic # 6 Polarization: 8.31 SS G_CDS: 6.70 Total: 15.02 kcal Atomic # 7 Polarization: -3.17 SS G_CDS: -7.04 Total: -10.20 kcal Atomic # 8 Polarization: -15.16 SS G_CDS: -1.94 Total: -17.10 kcal Atomic # 14 Polarization: -2.78 SS G_CDS: 2.14 Total: -0.63 kcal Total: -23.84 -1.39 -25.22 kcal The number of atoms in the molecule is 55 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_12463208_13259642.mol2 55 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -51.598 kcal (2) G-P(sol) polarization free energy of solvation -23.835 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -75.433 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.389 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.224 kcal (6) G-S(sol) free energy of system = (1) + (5) -76.823 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.54 seconds