Wall clock time and date at job start Thu Mar 4 2021 14:34:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 S 1.81397 * 1 3 3 C 1.81404 * 102.99763 * 2 1 4 4 H 1.08999 * 112.85147 * 43.80541 * 3 2 1 5 5 C 1.53785 * 113.61208 * 174.99814 * 3 2 1 6 6 C 1.53785 * 87.08003 * 140.06284 * 5 3 2 7 7 H 1.08994 * 113.61511 * 219.93494 * 6 5 3 8 8 N 1.46500 * 113.61309 * 89.11558 * 6 5 3 9 9 C 1.34776 * 120.00092 * 155.00080 * 8 6 5 10 10 O 1.21594 * 119.99859 * 0.02562 * 9 8 6 11 11 C 1.47578 * 120.00066 * 180.02562 * 9 8 6 12 12 C 1.36494 * 120.00830 * 179.97438 * 11 9 8 13 13 N 1.35950 * 120.50289 * 179.74783 * 12 11 9 14 14 C 1.37004 * 132.41270 * 179.61285 * 13 12 11 15 15 C 1.50705 * 126.42374 * 0.72069 * 14 13 12 16 16 O 1.42894 * 109.47171 * 329.71205 * 15 14 13 17 17 Si 1.86298 * 109.46780 * 209.70646 * 15 14 13 18 18 C 1.35005 * 107.14348 * 180.45645 * 14 13 12 19 19 N 1.33578 * 108.65294 * 0.24545 * 18 14 13 20 20 C 1.32412 * 109.23132 * 359.97438 * 19 18 14 21 21 C 1.41245 * 132.12343 * 180.02562 * 20 19 18 22 22 Br 1.89105 * 120.24982 * 359.97093 * 21 20 19 23 23 C 1.35695 * 119.49267 * 179.97438 * 21 20 19 24 24 C 1.53780 * 87.08094 * 334.56908 * 6 5 3 25 25 H 1.08996 * 109.47189 * 300.00090 * 1 2 3 26 26 H 1.09005 * 109.47074 * 60.00033 * 1 2 3 27 27 H 1.08997 * 109.47418 * 180.02562 * 1 2 3 28 28 H 1.09001 * 113.61390 * 25.52064 * 5 3 2 29 29 H 1.09000 * 113.61621 * 254.60954 * 5 3 2 30 30 H 0.97009 * 119.99827 * 335.00176 * 8 6 5 31 31 H 1.07996 * 119.74953 * 0.04972 * 12 11 9 32 32 H 1.09004 * 109.46779 * 89.71528 * 15 14 13 33 33 H 0.96709 * 113.99337 * 180.02562 * 16 15 14 34 34 H 1.48506 * 109.99834 * 60.00830 * 17 15 14 35 35 H 1.48502 * 110.00011 * 181.32094 * 17 15 14 36 36 H 1.08002 * 125.67178 * 180.20997 * 18 14 13 37 37 H 1.08001 * 120.23516 * 179.97438 * 23 21 20 38 38 H 1.08998 * 113.61593 * 139.98136 * 24 6 5 39 39 H 1.09004 * 113.61587 * 270.88104 * 24 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 16 1.8140 0.0000 0.0000 3 6 2.2220 1.7676 0.0000 4 1 1.6108 2.3430 0.6953 5 6 3.7283 2.0520 0.1229 6 6 3.5201 3.1753 -0.9067 7 1 4.3237 3.2506 -1.6392 8 7 3.1757 4.4660 -0.3054 9 6 3.4486 5.6102 -0.9633 10 8 3.9804 5.5711 -2.0561 11 6 3.1022 6.9105 -0.3573 12 6 3.3790 8.0694 -1.0232 13 7 3.0595 9.2725 -0.4767 14 6 3.2266 10.5599 -0.9145 15 6 3.8432 10.9877 -2.2214 16 8 4.8244 10.0291 -2.6215 17 14 4.6513 12.6530 -2.0110 18 6 2.7301 11.3731 0.0420 19 7 2.2726 10.6212 1.0468 20 6 2.4636 9.3433 0.7573 21 6 2.1672 8.1571 1.4645 22 35 1.3402 8.2421 3.1631 23 6 2.4803 6.9562 0.9158 24 6 2.3003 2.3836 -1.4068 25 1 -0.3633 0.5138 0.8899 26 1 -0.3633 0.5138 -0.8900 27 1 -0.3634 -1.0276 0.0005 28 1 4.3572 1.2388 -0.2394 29 1 4.0258 2.4121 1.1077 30 1 2.7511 4.4971 0.5663 31 1 3.8510 8.0301 -1.9938 32 1 3.0676 11.0540 -2.9845 33 1 5.2636 10.2410 -3.4567 34 1 5.7108 12.5759 -0.9732 35 1 5.2355 13.1006 -3.3008 36 1 2.7070 12.4521 0.0016 37 1 2.2594 6.0417 1.4463 38 1 1.4450 3.0113 -1.6569 39 1 2.5388 1.6610 -2.1873 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_22_12525166_12335884.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 14:34:25 Heat of formation + Delta-G solvation = 67.935643 kcal Electronic energy + Delta-G solvation = -26098.771027 eV Core-core repulsion = 22183.328507 eV Total energy + Delta-G solvation = -3915.442520 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 398.009 amu Computer time = 0.78 seconds Orbital eigenvalues (eV) -44.20469 -41.54397 -39.65449 -38.42927 -38.02340 -35.43863 -34.50395 -32.44219 -31.87698 -30.24207 -29.97304 -27.09240 -26.95932 -26.82525 -25.12305 -24.05814 -22.54979 -22.05147 -20.86171 -19.34548 -18.87431 -18.63114 -17.92506 -17.83897 -17.41486 -17.00570 -16.48973 -16.32768 -16.02174 -15.88528 -15.55071 -15.51291 -15.24083 -14.86564 -14.62315 -14.59146 -14.21511 -14.16917 -13.86267 -13.71930 -13.45254 -13.32477 -12.96527 -12.87772 -12.63506 -12.19323 -11.98936 -11.72451 -11.53542 -11.41802 -11.31656 -11.22928 -10.98700 -10.93465 -10.36349 -9.99018 -9.02878 -8.70518 -5.14308 -0.84964 -0.37610 0.22086 0.65823 0.86405 1.18765 1.31698 1.48311 1.50870 1.80611 1.83092 1.88959 2.25303 2.69513 2.85233 3.11360 3.17671 3.20792 3.34582 3.41445 3.49745 3.55743 3.74071 3.90869 4.02799 4.12861 4.13304 4.15707 4.25882 4.32846 4.43446 4.47530 4.53216 4.58910 4.61796 4.70905 4.74683 4.83021 4.99446 5.28702 5.30171 5.61118 6.09381 6.14981 6.53318 6.88814 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.123 4.123 2 S -0.249 6.249 3 C -0.087 4.087 4 H 0.104 0.896 5 C -0.116 4.116 6 C 0.124 3.876 7 H 0.116 0.884 8 N -0.706 5.706 9 C 0.582 3.418 10 O -0.525 6.525 11 C -0.180 4.180 12 C 0.178 3.822 13 N -0.353 5.353 14 C -0.039 4.039 15 C -0.046 4.046 16 O -0.544 6.544 17 Si 0.714 3.286 18 C 0.049 3.951 19 N -0.459 5.459 20 C 0.242 3.758 21 C -0.063 4.063 22 Br 0.008 6.992 23 C -0.042 4.042 24 C -0.138 4.138 25 H 0.076 0.924 26 H 0.077 0.923 27 H 0.101 0.899 28 H 0.108 0.892 29 H 0.086 0.914 30 H 0.402 0.598 31 H 0.192 0.808 32 H 0.086 0.914 33 H 0.391 0.609 34 H -0.250 1.250 35 H -0.253 1.253 36 H 0.198 0.802 37 H 0.153 0.847 38 H 0.077 0.923 39 H 0.107 0.893 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.893 1.129 -1.420 2.622 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.291 4.291 2 S -0.021 6.021 3 C -0.216 4.216 4 H 0.122 0.878 5 C -0.155 4.155 6 C 0.017 3.983 7 H 0.134 0.866 8 N -0.358 5.358 9 C 0.368 3.632 10 O -0.402 6.402 11 C -0.187 4.187 12 C 0.052 3.948 13 N -0.026 5.026 14 C -0.150 4.150 15 C -0.155 4.155 16 O -0.353 6.353 17 Si 0.611 3.389 18 C -0.101 4.101 19 N -0.177 5.177 20 C -0.003 4.003 21 C -0.145 4.145 22 Br 0.094 6.906 23 C -0.068 4.068 24 C -0.179 4.179 25 H 0.095 0.905 26 H 0.096 0.904 27 H 0.120 0.880 28 H 0.127 0.873 29 H 0.104 0.896 30 H 0.238 0.762 31 H 0.209 0.791 32 H 0.104 0.896 33 H 0.241 0.759 34 H -0.174 1.174 35 H -0.177 1.177 36 H 0.215 0.785 37 H 0.170 0.830 38 H 0.096 0.904 39 H 0.125 0.875 Dipole moment (debyes) X Y Z Total from point charges -0.957 0.781 -0.370 1.289 hybrid contribution -0.177 -0.163 -1.376 1.397 sum -1.134 0.618 -1.746 2.172 Atomic orbital electron populations 1.23383 0.94037 1.06708 1.04998 1.86974 1.07650 1.09822 1.97613 1.24813 1.00795 0.94775 1.01213 0.87777 1.23187 0.93735 0.98035 1.00554 1.21858 0.98624 0.81241 0.96555 0.86639 1.45484 1.62856 1.04940 1.22511 1.17464 0.78164 0.82902 0.84645 1.90856 1.42304 1.87135 1.19861 1.19190 1.09199 0.93486 0.96837 1.22094 0.92164 0.81521 0.99045 1.42589 1.38652 1.05831 1.15548 1.20907 1.12390 0.81510 1.00170 1.24473 0.94347 1.03663 0.92993 1.86473 1.55609 1.47684 1.45543 0.94659 0.85122 0.76968 0.82162 1.22361 0.98950 1.00312 0.88509 1.70867 1.22382 0.98002 1.26434 1.20396 1.01001 0.93949 0.84988 1.20422 1.06825 0.91176 0.96121 1.96855 1.78193 1.99082 1.16481 1.21043 0.95078 0.97131 0.93574 1.23786 0.99049 0.99261 0.95792 0.90462 0.90369 0.87994 0.87345 0.89555 0.76242 0.79131 0.89584 0.75904 1.17361 1.17685 0.78538 0.82972 0.90447 0.87456 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.20 10.76 101.05 1.09 1.29 16 2 S -0.25 -0.04 22.18 -107.50 -2.38 -2.42 16 3 C -0.09 0.18 4.15 -25.92 -0.11 0.08 16 4 H 0.10 -0.32 8.14 -51.93 -0.42 -0.74 16 5 C -0.12 0.30 7.42 -25.91 -0.19 0.11 16 6 C 0.12 -0.21 4.32 -67.12 -0.29 -0.50 16 7 H 0.12 -0.04 7.46 -51.93 -0.39 -0.42 16 8 N -0.71 1.34 5.21 -54.04 -0.28 1.06 16 9 C 0.58 0.51 7.76 -12.45 -0.10 0.41 16 10 O -0.52 -2.22 15.87 5.28 0.08 -2.13 16 11 C -0.18 -0.09 5.84 -105.37 -0.61 -0.71 16 12 C 0.18 0.30 9.91 -16.36 -0.16 0.14 16 13 N -0.35 -0.86 2.93 -58.09 -0.17 -1.04 16 14 C -0.04 -0.04 6.28 -81.43 -0.51 -0.55 16 15 C -0.05 0.07 3.05 36.01 0.11 0.18 16 16 O -0.54 0.40 10.88 -35.23 -0.38 0.02 16 17 Si 0.71 -1.91 31.18 -169.99 -5.30 -7.21 16 18 C 0.05 0.04 10.44 -17.94 -0.19 -0.14 16 19 N -0.46 -1.73 11.30 -12.71 -0.14 -1.88 16 20 C 0.24 0.80 7.59 -155.92 -1.18 -0.38 16 21 C -0.06 -0.10 6.24 -39.35 -0.25 -0.35 16 22 Br 0.01 0.01 33.72 -68.01 -2.29 -2.28 16 23 C -0.04 0.03 9.26 -39.15 -0.36 -0.34 16 24 C -0.14 0.25 7.47 -25.92 -0.19 0.06 16 25 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 26 H 0.08 -0.16 8.14 -51.92 -0.42 -0.58 16 27 H 0.10 -0.20 8.14 -51.93 -0.42 -0.62 16 28 H 0.11 -0.24 8.10 -51.93 -0.42 -0.66 16 29 H 0.09 -0.29 8.14 -51.93 -0.42 -0.71 16 30 H 0.40 -1.72 6.73 -40.82 -0.27 -1.99 16 31 H 0.19 0.31 6.19 -52.49 -0.32 -0.02 16 32 H 0.09 -0.30 7.96 -51.93 -0.41 -0.71 16 33 H 0.39 -1.84 8.74 45.56 0.40 -1.44 16 34 H -0.25 -0.33 7.11 56.52 0.40 0.07 16 35 H -0.25 0.24 7.11 56.52 0.40 0.64 16 36 H 0.20 -0.64 6.90 -52.49 -0.36 -1.00 16 37 H 0.15 -0.59 6.44 -52.49 -0.34 -0.93 16 38 H 0.08 -0.11 8.14 -51.93 -0.42 -0.54 16 39 H 0.11 -0.16 8.10 -51.93 -0.42 -0.58 16 LS Contribution 363.47 15.07 5.48 5.48 Total: 0.00 -9.32 363.47 -12.62 -21.95 By element: Atomic # 1 Polarization: -6.56 SS G_CDS: -4.28 Total: -10.84 kcal Atomic # 6 Polarization: 2.24 SS G_CDS: -2.95 Total: -0.71 kcal Atomic # 7 Polarization: -1.26 SS G_CDS: -0.60 Total: -1.85 kcal Atomic # 8 Polarization: -1.82 SS G_CDS: -0.30 Total: -2.11 kcal Atomic # 14 Polarization: -1.91 SS G_CDS: -5.30 Total: -7.21 kcal Atomic # 16 Polarization: -0.04 SS G_CDS: -2.38 Total: -2.42 kcal Atomic # 35 Polarization: 0.01 SS G_CDS: -2.29 Total: -2.28 kcal Total LS contribution 5.48 Total: 5.48 kcal Total: -9.32 -12.62 -21.95 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_12525166_12335884.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 89.884 kcal (2) G-P(sol) polarization free energy of solvation -9.325 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 80.560 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.624 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.949 kcal (6) G-S(sol) free energy of system = (1) + (5) 67.936 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.78 seconds