Wall clock time and date at job start Thu Mar 4 2021 14:34:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 S 1.81396 * 1 3 3 C 1.81407 * 103.00056 * 2 1 4 4 H 1.08994 * 112.84849 * 43.80291 * 3 2 1 5 5 C 1.53777 * 113.61325 * 174.99790 * 3 2 1 6 6 C 1.53784 * 87.08172 * 140.06669 * 5 3 2 7 7 H 1.09002 * 113.61454 * 219.93721 * 6 5 3 8 8 N 1.46499 * 113.61491 * 89.11442 * 6 5 3 9 9 C 1.34777 * 119.99665 * 155.28109 * 8 6 5 10 10 O 1.21573 * 120.00276 * 359.72080 * 9 8 6 11 11 C 1.47716 * 119.99706 * 179.72381 * 9 8 6 12 12 N 1.31802 * 126.51708 * 0.02562 * 11 9 8 13 13 N 1.28471 * 110.07361 * 179.97438 * 12 11 9 14 14 C 1.46505 * 124.88609 * 179.97438 * 13 12 11 15 15 C 1.35033 * 110.22604 * 0.02562 * 13 12 11 16 16 C 1.50708 * 126.37970 * 180.02562 * 15 13 12 17 17 O 1.42892 * 109.47102 * 30.00051 * 16 15 13 18 18 Si 1.86300 * 109.46628 * 149.99919 * 16 15 13 19 19 C 1.35359 * 107.23279 * 359.76021 * 15 13 12 20 20 C 1.53777 * 113.68914 * 272.53228 * 3 2 1 21 21 H 1.08993 * 109.47196 * 300.00296 * 1 2 3 22 22 H 1.09004 * 109.47050 * 60.00144 * 1 2 3 23 23 H 1.08999 * 109.47078 * 179.97438 * 1 2 3 24 24 H 1.08999 * 113.61756 * 25.52179 * 5 3 2 25 25 H 1.08999 * 113.69433 * 254.62504 * 5 3 2 26 26 H 0.97001 * 119.99790 * 334.99822 * 8 6 5 27 27 H 1.08994 * 109.46929 * 90.02302 * 14 13 12 28 28 H 1.08999 * 109.46904 * 210.02620 * 14 13 12 29 29 H 1.09004 * 109.46669 * 330.02327 * 14 13 12 30 30 H 1.08996 * 109.47078 * 269.99514 * 16 15 13 31 31 H 0.96704 * 114.00161 * 179.97438 * 17 16 15 32 32 H 1.48506 * 110.00009 * 178.68288 * 18 16 15 33 33 H 1.48500 * 110.00042 * 299.99592 * 18 16 15 34 34 H 1.07995 * 127.25363 * 180.24281 * 19 15 13 35 35 H 1.08999 * 113.61239 * 105.45820 * 20 3 2 36 36 H 1.08999 * 113.61926 * 334.56054 * 20 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 16 1.8140 0.0000 0.0000 3 6 2.2221 1.7676 0.0000 4 1 1.6109 2.3430 0.6952 5 6 3.7283 2.0520 0.1229 6 6 3.5202 3.1753 -0.9066 7 1 4.3239 3.2506 -1.6392 8 7 3.1758 4.4660 -0.3053 9 6 3.4437 5.6100 -0.9657 10 8 3.9758 5.5710 -2.0581 11 6 3.0909 6.9112 -0.3621 12 7 2.5148 7.1026 0.8078 13 7 2.3544 8.3595 1.0200 14 6 1.7449 8.9354 2.2213 15 6 2.8275 9.0733 -0.0241 16 6 2.8231 10.5746 -0.1559 17 8 2.9173 11.1668 1.1411 18 14 4.2763 11.1112 -1.1907 19 6 3.3117 8.1893 -0.9276 20 6 2.3004 2.3836 -1.4068 21 1 -0.3633 0.5138 0.8899 22 1 -0.3633 0.5138 -0.8900 23 1 -0.3633 -1.0277 -0.0005 24 1 4.3572 1.2388 -0.2394 25 1 4.0272 2.4119 1.1073 26 1 2.7512 4.4971 0.5663 27 1 2.5175 9.1208 2.9674 28 1 1.2542 9.8745 1.9652 29 1 1.0094 8.2394 2.6248 30 1 1.8979 10.8945 -0.6351 31 1 2.9204 12.1338 1.1327 32 1 4.2656 12.5872 -1.3547 33 1 5.5440 10.6809 -0.5480 34 1 3.7687 8.4124 -1.8803 35 1 1.4451 3.0112 -1.6569 36 1 2.5389 1.6610 -2.1873 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_22_12525166_13259642.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 14:34:30 Heat of formation + Delta-G solvation = 47.372752 kcal Electronic energy + Delta-G solvation = -20021.618237 eV Core-core repulsion = 16829.780467 eV Total energy + Delta-G solvation = -3191.837770 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 284.098 amu Computer time = 0.44 seconds Orbital eigenvalues (eV) -43.76582 -40.99538 -38.97999 -38.22927 -34.56914 -34.03689 -32.67242 -29.90008 -28.71167 -27.02775 -26.80556 -26.19275 -24.09635 -22.11950 -20.93159 -20.58007 -18.81332 -18.49110 -17.90684 -17.43322 -17.23123 -16.88773 -16.16987 -15.85886 -15.67035 -15.45108 -15.17520 -14.76119 -14.62539 -14.50060 -14.11008 -14.03878 -13.87430 -13.58630 -13.52288 -13.49625 -13.11380 -12.50397 -12.36173 -11.84315 -11.81437 -11.56637 -11.15930 -11.06317 -10.82516 -10.18456 -9.97672 -9.88539 -8.61127 -5.03693 0.55749 0.76033 0.81527 1.21564 1.44632 1.57670 1.60668 1.89409 2.10811 2.45998 2.79445 3.30364 3.34149 3.36509 3.44169 3.72053 3.89015 3.95472 4.06195 4.17975 4.20344 4.23021 4.32852 4.45723 4.49072 4.52158 4.67038 4.72228 4.75622 4.78386 4.80537 4.90375 5.01966 5.32852 5.54827 5.66433 6.08445 6.46020 6.89776 7.25899 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.122 4.122 2 S -0.252 6.252 3 C -0.085 4.085 4 H 0.103 0.897 5 C -0.116 4.116 6 C 0.125 3.875 7 H 0.115 0.885 8 N -0.704 5.704 9 C 0.612 3.388 10 O -0.524 6.524 11 C -0.017 4.017 12 N -0.259 5.259 13 N -0.261 5.261 14 C 0.094 3.906 15 C 0.028 3.972 16 C -0.051 4.051 17 O -0.543 6.543 18 Si 0.711 3.289 19 C -0.174 4.174 20 C -0.138 4.138 21 H 0.075 0.925 22 H 0.077 0.923 23 H 0.101 0.899 24 H 0.107 0.893 25 H 0.085 0.915 26 H 0.407 0.593 27 H 0.086 0.914 28 H 0.102 0.898 29 H 0.091 0.909 30 H 0.088 0.912 31 H 0.388 0.612 32 H -0.254 1.254 33 H -0.251 1.251 34 H 0.173 0.827 35 H 0.076 0.924 36 H 0.106 0.894 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.433 4.011 1.294 5.436 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.291 4.291 2 S -0.024 6.024 3 C -0.214 4.214 4 H 0.122 0.878 5 C -0.155 4.155 6 C 0.017 3.983 7 H 0.133 0.867 8 N -0.355 5.355 9 C 0.397 3.603 10 O -0.398 6.398 11 C -0.176 4.176 12 N -0.096 5.096 13 N -0.049 5.049 14 C -0.046 4.046 15 C -0.097 4.097 16 C -0.160 4.160 17 O -0.351 6.351 18 Si 0.608 3.392 19 C -0.201 4.201 20 C -0.179 4.179 21 H 0.095 0.905 22 H 0.096 0.904 23 H 0.119 0.881 24 H 0.125 0.875 25 H 0.103 0.897 26 H 0.242 0.758 27 H 0.105 0.895 28 H 0.121 0.879 29 H 0.110 0.890 30 H 0.105 0.895 31 H 0.238 0.762 32 H -0.178 1.178 33 H -0.175 1.175 34 H 0.190 0.810 35 H 0.095 0.905 36 H 0.124 0.876 Dipole moment (debyes) X Y Z Total from point charges -2.124 2.408 1.718 3.641 hybrid contribution -1.390 2.222 0.920 2.778 sum -3.514 4.630 2.638 6.383 Atomic orbital electron populations 1.23369 0.94148 1.06591 1.04964 1.86925 1.07558 1.10237 1.97637 1.24807 1.00857 0.94377 1.01350 0.87830 1.23175 0.93613 0.98111 1.00650 1.21821 0.98445 0.81579 0.96419 0.86730 1.45505 1.62740 1.04652 1.22629 1.16809 0.77732 0.81656 0.84121 1.90824 1.42479 1.86696 1.19756 1.21688 1.07346 0.94870 0.93661 1.73493 1.18452 0.99598 1.18074 1.45307 1.41471 1.02508 1.15659 1.22233 0.99152 0.99579 0.83658 1.20768 1.04604 0.93488 0.90848 1.24400 1.11359 0.88896 0.91393 1.86500 1.96539 1.25676 1.26414 0.94214 0.76294 0.81143 0.87503 1.21348 1.06831 0.89888 1.02079 1.23779 0.99239 0.99258 0.95616 0.90548 0.90380 0.88066 0.87488 0.89681 0.75765 0.89511 0.87930 0.89033 0.89462 0.76206 1.17823 1.17465 0.80964 0.90505 0.87552 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.08 10.76 101.05 1.09 1.17 16 2 S -0.25 -0.32 22.18 -107.50 -2.38 -2.70 16 3 C -0.09 0.04 4.15 -25.92 -0.11 -0.07 16 4 H 0.10 -0.10 8.14 -51.93 -0.42 -0.52 16 5 C -0.12 0.10 7.42 -25.92 -0.19 -0.10 16 6 C 0.12 0.04 4.32 -67.12 -0.29 -0.26 16 7 H 0.11 0.16 7.47 -51.93 -0.39 -0.23 16 8 N -0.70 -0.73 5.26 -54.00 -0.28 -1.01 16 9 C 0.61 2.25 7.83 -12.39 -0.10 2.15 16 10 O -0.52 -3.34 16.53 5.30 0.09 -3.25 16 11 C -0.02 -0.06 7.13 -82.77 -0.59 -0.65 16 12 N -0.26 -0.71 11.67 33.42 0.39 -0.32 16 13 N -0.26 -0.40 3.70 -63.85 -0.24 -0.63 16 14 C 0.09 -0.16 10.12 59.85 0.61 0.45 16 15 C 0.03 0.03 6.22 -82.21 -0.51 -0.48 16 16 C -0.05 0.09 2.86 36.01 0.10 0.20 16 17 O -0.54 1.15 10.38 -35.23 -0.37 0.79 16 18 Si 0.71 -1.36 31.22 -169.99 -5.31 -6.67 16 19 C -0.17 -0.34 9.35 -39.37 -0.37 -0.71 16 20 C -0.14 0.03 7.47 -25.92 -0.19 -0.17 16 21 H 0.08 -0.10 8.14 -51.93 -0.42 -0.52 16 22 H 0.08 -0.09 8.14 -51.92 -0.42 -0.51 16 23 H 0.10 -0.12 8.14 -51.92 -0.42 -0.54 16 24 H 0.11 -0.09 8.10 -51.93 -0.42 -0.51 16 25 H 0.08 -0.11 8.14 -51.93 -0.42 -0.53 16 26 H 0.41 -0.11 8.43 -40.82 -0.34 -0.45 16 27 H 0.09 -0.16 8.14 -51.93 -0.42 -0.58 16 28 H 0.10 -0.29 6.77 -51.93 -0.35 -0.64 16 29 H 0.09 -0.26 8.14 -51.93 -0.42 -0.68 16 30 H 0.09 -0.33 7.96 -51.93 -0.41 -0.75 16 31 H 0.39 -2.32 8.74 45.56 0.40 -1.93 16 32 H -0.25 0.15 7.11 56.52 0.40 0.55 16 33 H -0.25 -0.54 7.11 56.52 0.40 -0.14 16 34 H 0.17 -0.02 7.01 -52.49 -0.37 -0.38 16 35 H 0.08 0.02 8.14 -51.93 -0.42 -0.40 16 36 H 0.11 -0.02 8.10 -51.93 -0.42 -0.44 16 LS Contribution 320.49 15.07 4.83 4.83 Total: 0.00 -7.92 320.49 -8.71 -16.63 By element: Atomic # 1 Polarization: -4.32 SS G_CDS: -4.89 Total: -9.21 kcal Atomic # 6 Polarization: 2.10 SS G_CDS: -0.55 Total: 1.55 kcal Atomic # 7 Polarization: -1.83 SS G_CDS: -0.13 Total: -1.96 kcal Atomic # 8 Polarization: -2.19 SS G_CDS: -0.28 Total: -2.47 kcal Atomic # 14 Polarization: -1.36 SS G_CDS: -5.31 Total: -6.67 kcal Atomic # 16 Polarization: -0.32 SS G_CDS: -2.38 Total: -2.70 kcal Total LS contribution 4.83 Total: 4.83 kcal Total: -7.92 -8.71 -16.63 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_12525166_13259642.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 64.003 kcal (2) G-P(sol) polarization free energy of solvation -7.919 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 56.084 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.711 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.630 kcal (6) G-S(sol) free energy of system = (1) + (5) 47.373 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.44 seconds