Wall clock time and date at job start Thu Mar 4 2021 12:32:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46503 * 1 3 3 N 1.28461 * 124.88786 * 2 1 4 4 C 1.31813 * 110.07483 * 180.02562 * 3 2 1 5 5 C 1.47709 * 126.51648 * 180.02562 * 4 3 2 6 6 O 1.21571 * 119.99826 * 179.97438 * 5 4 3 7 7 N 1.34777 * 120.00118 * 359.97389 * 5 4 3 8 8 C 1.46504 * 119.99909 * 179.97438 * 7 5 4 9 9 C 1.52999 * 109.47057 * 180.02562 * 8 7 5 10 10 H 1.08997 * 112.84791 * 316.19683 * 9 8 7 11 11 C 1.53776 * 113.61681 * 87.50360 * 9 8 7 12 12 C 1.53780 * 87.08040 * 139.98032 * 11 9 8 13 13 H 1.08999 * 113.61449 * 89.12128 * 12 11 9 14 14 N 1.46504 * 113.61324 * 220.01837 * 12 11 9 15 15 C 1.34778 * 119.99928 * 252.49741 * 14 12 11 16 16 O 1.21508 * 120.00080 * 0.02562 * 15 14 12 17 17 O 1.34637 * 119.99517 * 179.97438 * 15 14 12 18 18 C 1.45207 * 116.99576 * 179.97438 * 17 15 14 19 19 C 1.52997 * 109.47008 * 60.00678 * 18 17 15 20 20 C 1.53001 * 109.46832 * 180.02562 * 18 17 15 21 21 C 1.52999 * 109.46952 * 300.00533 * 18 17 15 22 22 C 1.53777 * 87.08101 * 334.56754 * 12 11 9 23 23 C 1.41499 * 106.96132 * 359.77198 * 4 3 2 24 24 C 1.35033 * 124.88130 * 180.02562 * 2 1 3 25 25 C 1.50707 * 126.38941 * 359.95678 * 24 2 1 26 26 O 1.42903 * 109.46442 * 30.00179 * 25 24 2 27 27 Si 1.86293 * 109.47256 * 149.99745 * 25 24 2 28 28 H 1.08993 * 109.47341 * 269.97412 * 1 2 3 29 29 H 1.09005 * 109.46988 * 29.97809 * 1 2 3 30 30 H 1.09005 * 109.47269 * 149.97167 * 1 2 3 31 31 H 0.96998 * 120.00390 * 0.02562 * 7 5 4 32 32 H 1.08997 * 109.47263 * 300.00467 * 8 7 5 33 33 H 1.09000 * 109.46542 * 60.00360 * 8 7 5 34 34 H 1.09001 * 113.61362 * 254.53244 * 11 9 8 35 35 H 1.08999 * 113.61214 * 25.43062 * 11 9 8 36 36 H 0.96999 * 119.99634 * 72.49450 * 14 12 11 37 37 H 1.09000 * 109.46992 * 59.99680 * 19 18 17 38 38 H 1.09000 * 109.47044 * 180.02562 * 19 18 17 39 39 H 1.09000 * 109.47351 * 299.99787 * 19 18 17 40 40 H 1.08992 * 109.47303 * 60.00173 * 20 18 17 41 41 H 1.09002 * 109.46933 * 180.02562 * 20 18 17 42 42 H 1.08999 * 109.46687 * 299.99938 * 20 18 17 43 43 H 1.09000 * 109.47148 * 60.00371 * 21 18 17 44 44 H 1.09002 * 109.46545 * 179.97438 * 21 18 17 45 45 H 1.09001 * 109.47134 * 299.99717 * 21 18 17 46 46 H 1.08994 * 113.61631 * 270.88229 * 22 12 11 47 47 H 1.09002 * 113.68744 * 139.99000 * 22 12 11 48 48 H 1.08002 * 127.25017 * 180.24765 * 23 4 3 49 49 H 1.08999 * 109.47345 * 270.00249 * 25 24 2 50 50 H 0.96700 * 114.00311 * 60.00230 * 26 25 24 51 51 H 1.48501 * 109.99918 * 58.68485 * 27 25 24 52 52 H 1.48506 * 109.99973 * 180.02562 * 27 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 7 2.1998 1.0537 0.0000 4 6 3.4741 0.7167 -0.0006 5 6 4.6274 1.6397 -0.0002 6 8 5.7598 1.1974 -0.0003 7 7 4.4242 2.9720 0.0002 8 6 5.5681 3.8874 0.0011 9 6 5.0650 5.3323 0.0021 10 1 4.2413 5.4942 -0.6932 11 6 4.8042 5.8929 1.4101 12 6 5.4143 7.2136 0.9118 13 1 4.6855 7.8906 0.4663 14 7 6.2751 7.8713 1.8981 15 6 5.8538 8.9898 2.5209 16 8 4.7598 9.4524 2.2647 17 8 6.6447 9.5939 3.4276 18 6 6.1264 10.7947 4.0585 19 6 4.8303 10.4621 4.8003 20 6 7.1580 11.3354 5.0506 21 6 5.8450 11.8519 2.9889 22 6 6.1880 6.3757 -0.1198 23 6 3.5272 -0.6973 0.0045 24 6 2.2373 -1.1077 -0.0005 25 6 1.7533 -2.5350 -0.0002 26 8 0.4950 -2.6113 -0.6732 27 14 2.9939 -3.6115 -0.8793 28 1 -0.3633 -0.0005 1.0276 29 1 -0.3633 0.8902 -0.5135 30 1 -0.3634 -0.8898 -0.5143 31 1 3.5207 3.3249 0.0007 32 1 6.1724 3.7129 0.8913 33 1 6.1731 3.7136 -0.8887 34 1 3.7461 5.9679 1.6611 35 1 5.3916 5.4070 2.1892 36 1 7.1483 7.5017 2.1028 37 1 5.0308 9.7089 5.5623 38 1 4.4409 11.3636 5.2735 39 1 4.0955 10.0771 4.0933 40 1 8.0811 11.5724 4.5219 41 1 6.7687 12.2366 5.5245 42 1 7.3587 10.5823 5.8126 43 1 5.1102 11.4668 2.2818 44 1 5.4555 12.7531 3.4625 45 1 6.7685 12.0888 2.4604 46 1 7.1538 6.0219 0.2410 47 1 6.2481 6.8396 -1.1043 48 1 4.4108 -1.3183 0.0092 49 1 1.6373 -2.8791 1.0275 50 1 0.5234 -2.3198 -1.5947 51 1 4.3151 -3.5161 -0.2080 52 1 2.5280 -5.0216 -0.8864 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_12628476_13259642.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 12:32:11 Heat of formation + Delta-G solvation = -42.290282 kcal Electronic energy + Delta-G solvation = -32766.272355 eV Core-core repulsion = 28156.453488 eV Total energy + Delta-G solvation = -4609.818868 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 367.199 amu Computer time = 1.40 seconds Orbital eigenvalues (eV) -43.86393 -41.91749 -40.85688 -39.99742 -38.11526 -37.99970 -35.92674 -35.25482 -34.42830 -33.96143 -32.64243 -29.60027 -28.39082 -28.32627 -28.12944 -26.75060 -26.65956 -24.98662 -23.83207 -22.40052 -22.24787 -21.47893 -21.08388 -20.36537 -19.22250 -19.01873 -17.89134 -17.56660 -17.54374 -17.24527 -17.18540 -16.97369 -16.51074 -16.32623 -16.05285 -15.85362 -15.68304 -15.54177 -15.38966 -15.11369 -14.82869 -14.58130 -14.49315 -14.00601 -13.66272 -13.46683 -13.44284 -13.41642 -13.37667 -13.26883 -13.01007 -12.91903 -12.88858 -12.59525 -12.54121 -12.39523 -12.34836 -12.18171 -11.86591 -11.79400 -11.44700 -11.41641 -11.29341 -11.11764 -10.86593 -10.35444 -10.15832 -10.01097 -9.98049 -4.97026 0.42448 0.78943 1.16848 1.18531 1.55239 1.70989 1.72055 1.97417 2.11877 2.27993 3.12479 3.13908 3.31931 3.32188 3.42057 3.55011 3.72082 3.75443 3.76835 3.80323 3.92284 4.03454 4.19921 4.31459 4.33253 4.38010 4.38280 4.50343 4.52326 4.58909 4.59743 4.64640 4.70269 4.74064 4.74402 4.79060 4.80117 4.82086 4.85296 4.87242 4.96538 5.04554 5.08809 5.17782 5.19879 5.24722 5.29675 5.36613 5.51792 5.58710 5.66677 6.35720 6.39111 6.52689 6.80524 7.09529 7.32590 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.062 3.938 2 N -0.258 5.258 3 N -0.261 5.261 4 C -0.039 4.039 5 C 0.601 3.399 6 O -0.571 6.571 7 N -0.705 5.705 8 C 0.132 3.868 9 C -0.108 4.108 10 H 0.115 0.885 11 C -0.147 4.147 12 C 0.134 3.866 13 H 0.108 0.892 14 N -0.691 5.691 15 C 0.642 3.358 16 O -0.595 6.595 17 O -0.371 6.371 18 C 0.127 3.873 19 C -0.180 4.180 20 C -0.138 4.138 21 C -0.179 4.179 22 C -0.122 4.122 23 C -0.197 4.197 24 C -0.007 4.007 25 C -0.035 4.035 26 O -0.541 6.541 27 Si 0.791 3.209 28 H 0.087 0.913 29 H 0.106 0.894 30 H 0.139 0.861 31 H 0.415 0.585 32 H 0.066 0.934 33 H 0.073 0.927 34 H 0.070 0.930 35 H 0.088 0.912 36 H 0.417 0.583 37 H 0.060 0.940 38 H 0.087 0.913 39 H 0.063 0.937 40 H 0.069 0.931 41 H 0.098 0.902 42 H 0.068 0.932 43 H 0.064 0.936 44 H 0.086 0.914 45 H 0.062 0.938 46 H 0.104 0.896 47 H 0.093 0.907 48 H 0.160 0.840 49 H 0.127 0.873 50 H 0.400 0.600 51 H -0.292 1.292 52 H -0.280 1.280 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.086 -0.046 -2.658 4.073 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 N -0.047 5.047 3 N -0.099 5.099 4 C -0.197 4.197 5 C 0.387 3.613 6 O -0.449 6.449 7 N -0.356 5.356 8 C 0.009 3.991 9 C -0.127 4.127 10 H 0.133 0.867 11 C -0.186 4.186 12 C 0.031 3.969 13 H 0.126 0.874 14 N -0.349 5.349 15 C 0.396 3.604 16 O -0.486 6.486 17 O -0.286 6.286 18 C 0.090 3.910 19 C -0.237 4.237 20 C -0.195 4.195 21 C -0.237 4.237 22 C -0.161 4.161 23 C -0.226 4.226 24 C -0.133 4.133 25 C -0.146 4.146 26 O -0.349 6.349 27 Si 0.695 3.305 28 H 0.106 0.894 29 H 0.124 0.876 30 H 0.156 0.844 31 H 0.252 0.748 32 H 0.085 0.915 33 H 0.091 0.909 34 H 0.089 0.911 35 H 0.106 0.894 36 H 0.254 0.746 37 H 0.079 0.921 38 H 0.105 0.895 39 H 0.082 0.918 40 H 0.089 0.911 41 H 0.117 0.883 42 H 0.087 0.913 43 H 0.083 0.917 44 H 0.105 0.895 45 H 0.081 0.919 46 H 0.122 0.878 47 H 0.112 0.888 48 H 0.178 0.822 49 H 0.144 0.856 50 H 0.251 0.749 51 H -0.218 1.218 52 H -0.207 1.207 Dipole moment (debyes) X Y Z Total from point charges -3.305 0.024 -2.092 3.912 hybrid contribution 0.255 -0.285 0.921 0.997 sum -3.050 -0.261 -1.171 3.278 Atomic orbital electron populations 1.22963 0.70435 1.08245 1.05942 1.45730 1.09043 1.01633 1.48319 1.73472 1.02512 1.14814 1.19143 1.21779 0.91060 0.94219 1.12598 1.17041 0.86275 0.82247 0.75769 1.90789 1.23981 1.77897 1.52209 1.45787 1.11566 1.04638 1.73616 1.21445 0.87828 0.87296 1.02531 1.22506 1.00206 0.91879 0.98076 0.86664 1.23616 1.02047 0.95698 0.97210 1.22605 0.93467 0.92176 0.88676 0.87420 1.44816 1.22385 1.25042 1.42701 1.18446 0.82339 0.81155 0.78454 1.90895 1.22660 1.66934 1.68071 1.86318 1.47474 1.42171 1.52605 1.22350 0.95154 0.80835 0.92622 1.22468 0.97115 1.03407 1.00695 1.21892 0.98061 1.01983 0.97560 1.22469 1.02784 0.99008 0.99401 1.23338 0.98412 0.94554 0.99797 1.21620 0.97288 0.93808 1.09842 1.22097 0.90618 0.92306 1.08262 1.24835 0.94510 0.92097 1.03181 1.86449 1.29010 1.88620 1.30860 0.93149 0.73384 0.75500 0.88505 0.89413 0.87590 0.84356 0.74824 0.91541 0.90895 0.91075 0.89355 0.74636 0.92098 0.89454 0.91765 0.91149 0.88300 0.91291 0.91746 0.89469 0.91910 0.87760 0.88838 0.82217 0.85582 0.74862 1.21838 1.20657 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.47 11.00 127.77 1.41 0.94 16 2 N -0.26 0.01 3.70 -355.91 -1.32 -1.30 16 3 N -0.26 -1.10 11.67 -48.18 -0.56 -1.66 16 4 C -0.04 -0.28 7.13 42.45 0.30 0.02 16 5 C 0.60 5.37 7.82 86.75 0.68 6.05 16 6 O -0.57 -8.99 16.93 -3.94 -0.07 -9.06 16 7 N -0.70 -1.44 5.55 -466.09 -2.59 -4.03 16 8 C 0.13 -0.14 5.51 86.38 0.48 0.34 16 9 C -0.11 0.59 3.75 -10.27 -0.04 0.56 16 10 H 0.12 -0.83 8.14 -2.39 -0.02 -0.85 16 11 C -0.15 0.43 7.43 31.12 0.23 0.67 16 12 C 0.13 -0.26 4.24 45.52 0.19 -0.06 16 13 H 0.11 0.13 7.47 -2.39 -0.02 0.11 16 14 N -0.69 -0.30 5.36 -567.61 -3.04 -3.34 16 15 C 0.64 4.52 8.06 129.79 1.05 5.56 16 16 O -0.59 -7.23 11.48 19.81 0.23 -7.00 16 17 O -0.37 -2.26 9.94 -55.47 -0.55 -2.82 16 18 C 0.13 0.44 1.13 -10.79 -0.01 0.43 16 19 C -0.18 -0.69 8.37 71.98 0.60 -0.09 16 20 C -0.14 0.20 8.85 71.98 0.64 0.84 16 21 C -0.18 -0.64 8.37 71.98 0.60 -0.03 16 22 C -0.12 0.80 7.39 31.12 0.23 1.03 16 23 C -0.20 -1.04 9.35 22.41 0.21 -0.83 16 24 C -0.01 0.00 6.17 41.41 0.26 0.25 16 25 C -0.04 0.16 2.99 71.24 0.21 0.37 16 26 O -0.54 4.20 10.02 -148.98 -1.49 2.71 16 27 Si 0.79 -3.12 31.38 68.60 2.15 -0.97 16 28 H 0.09 -0.67 8.14 -2.39 -0.02 -0.69 16 29 H 0.11 -1.01 8.14 -2.38 -0.02 -1.02 16 30 H 0.14 -1.55 5.00 -2.38 -0.01 -1.56 16 31 H 0.42 -0.45 8.20 -92.71 -0.76 -1.21 16 32 H 0.07 0.05 7.84 -2.39 -0.02 0.03 16 33 H 0.07 -0.01 8.14 -2.39 -0.02 -0.03 16 34 H 0.07 -0.10 8.14 -2.39 -0.02 -0.12 16 35 H 0.09 -0.20 7.89 -2.39 -0.02 -0.22 16 36 H 0.42 -1.58 8.84 -92.71 -0.82 -2.40 16 37 H 0.06 0.21 8.14 -2.39 -0.02 0.19 16 38 H 0.09 0.03 8.14 -2.39 -0.02 0.01 16 39 H 0.06 0.58 5.88 -2.39 -0.01 0.57 16 40 H 0.07 -0.12 8.14 -2.39 -0.02 -0.14 16 41 H 0.10 -0.48 8.14 -2.39 -0.02 -0.50 16 42 H 0.07 -0.10 8.14 -2.39 -0.02 -0.12 16 43 H 0.06 0.56 5.88 -2.39 -0.01 0.55 16 44 H 0.09 0.00 8.14 -2.39 -0.02 -0.02 16 45 H 0.06 0.18 8.14 -2.39 -0.02 0.16 16 46 H 0.10 -0.85 8.08 -2.39 -0.02 -0.87 16 47 H 0.09 -0.71 8.14 -2.39 -0.02 -0.73 16 48 H 0.16 0.91 6.85 -2.91 -0.02 0.89 16 49 H 0.13 -0.54 7.96 -2.39 -0.02 -0.56 16 50 H 0.40 -6.10 8.39 -74.06 -0.62 -6.72 16 51 H -0.29 -0.92 6.83 99.48 0.68 -0.24 16 52 H -0.28 -0.41 7.11 99.48 0.71 0.29 16 Total: 0.00 -25.22 421.67 -1.43 -26.64 By element: Atomic # 1 Polarization: -13.99 SS G_CDS: -1.22 Total: -15.21 kcal Atomic # 6 Polarization: 9.00 SS G_CDS: 7.03 Total: 16.03 kcal Atomic # 7 Polarization: -2.83 SS G_CDS: -7.51 Total: -10.33 kcal Atomic # 8 Polarization: -14.29 SS G_CDS: -1.88 Total: -16.17 kcal Atomic # 14 Polarization: -3.12 SS G_CDS: 2.15 Total: -0.97 kcal Total: -25.22 -1.43 -26.64 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_12628476_13259642.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -15.645 kcal (2) G-P(sol) polarization free energy of solvation -25.219 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -40.864 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.426 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.645 kcal (6) G-S(sol) free energy of system = (1) + (5) -42.290 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.40 seconds