Wall clock time and date at job start Thu Mar 4 2021 12:32:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46493 * 1 3 3 N 1.28466 * 124.88761 * 2 1 4 4 C 1.31805 * 110.07774 * 179.97438 * 3 2 1 5 5 C 1.47709 * 126.52114 * 180.02562 * 4 3 2 6 6 O 1.21572 * 120.00233 * 179.97438 * 5 4 3 7 7 N 1.34778 * 119.99917 * 359.96275 * 5 4 3 8 8 C 1.46498 * 120.00068 * 180.02562 * 7 5 4 9 9 C 1.52998 * 109.46972 * 180.02562 * 8 7 5 10 10 H 1.09000 * 112.85114 * 43.80271 * 9 8 7 11 11 C 1.53789 * 113.61217 * 174.99995 * 9 8 7 12 12 C 1.53784 * 87.08072 * 139.97839 * 11 9 8 13 13 H 1.08997 * 113.61338 * 220.01585 * 12 11 9 14 14 N 1.46510 * 113.61016 * 89.19823 * 12 11 9 15 15 C 1.34775 * 119.99461 * 155.00454 * 14 12 11 16 16 O 1.21514 * 120.00424 * 359.97438 * 15 14 12 17 17 O 1.34633 * 119.99835 * 180.02562 * 15 14 12 18 18 C 1.45208 * 117.00174 * 179.97438 * 17 15 14 19 19 C 1.52993 * 109.46941 * 59.99339 * 18 17 15 20 20 C 1.52997 * 109.46940 * 179.97438 * 18 17 15 21 21 C 1.53000 * 109.46897 * 299.99399 * 18 17 15 22 22 C 1.53777 * 113.61451 * 272.49190 * 9 8 7 23 23 C 1.41503 * 106.96348 * 359.76134 * 4 3 2 24 24 C 1.35037 * 124.88118 * 179.97438 * 2 1 3 25 25 C 1.50699 * 126.38862 * 359.97438 * 24 2 1 26 26 O 1.42892 * 109.47249 * 330.00334 * 25 24 2 27 27 Si 1.86298 * 109.47032 * 209.99720 * 25 24 2 28 28 H 1.09001 * 109.47253 * 270.02348 * 1 2 3 29 29 H 1.08998 * 109.47750 * 30.02606 * 1 2 3 30 30 H 1.09003 * 109.47428 * 150.02905 * 1 2 3 31 31 H 0.97005 * 119.99909 * 0.02562 * 7 5 4 32 32 H 1.09002 * 109.47004 * 300.00557 * 8 7 5 33 33 H 1.08993 * 109.47200 * 59.99904 * 8 7 5 34 34 H 1.08999 * 113.61464 * 254.52664 * 11 9 8 35 35 H 1.09001 * 113.61428 * 25.34491 * 11 9 8 36 36 H 0.96993 * 119.99933 * 334.99853 * 14 12 11 37 37 H 1.09001 * 109.47273 * 60.00368 * 19 18 17 38 38 H 1.09008 * 109.46966 * 180.02562 * 19 18 17 39 39 H 1.08995 * 109.47321 * 300.00123 * 19 18 17 40 40 H 1.09003 * 109.47383 * 60.00056 * 20 18 17 41 41 H 1.09005 * 109.47142 * 179.97438 * 20 18 17 42 42 H 1.09001 * 109.47215 * 299.99595 * 20 18 17 43 43 H 1.09003 * 109.47273 * 59.99800 * 21 18 17 44 44 H 1.08992 * 109.47312 * 180.02562 * 21 18 17 45 45 H 1.09005 * 109.47192 * 300.00648 * 21 18 17 46 46 H 1.08997 * 113.61941 * 334.57496 * 22 9 8 47 47 H 1.09008 * 113.61117 * 105.47043 * 22 9 8 48 48 H 1.08001 * 127.25358 * 180.24670 * 23 4 3 49 49 H 1.09004 * 109.46453 * 90.00402 * 25 24 2 50 50 H 0.96703 * 114.00176 * 299.99748 * 26 25 24 51 51 H 1.48506 * 109.99834 * 58.68765 * 27 25 24 52 52 H 1.48502 * 110.00011 * 180.02562 * 27 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4649 0.0000 0.0000 3 7 2.1997 1.0538 0.0000 4 6 3.4740 0.7169 0.0006 5 6 4.6272 1.6398 0.0013 6 8 5.7597 1.1976 0.0022 7 7 4.4241 2.9722 0.0007 8 6 5.5679 3.8875 0.0008 9 6 5.0647 5.3324 0.0006 10 1 4.2407 5.4938 0.6958 11 6 6.1878 6.3758 0.1236 12 6 5.4144 7.2143 -0.9078 13 1 6.0551 7.7042 -1.6410 14 7 4.4359 8.1252 -0.3084 15 6 4.0586 9.2380 -0.9686 16 8 4.5304 9.4861 -2.0606 17 8 3.1598 10.0754 -0.4177 18 6 2.8006 11.2547 -1.1850 19 6 2.1973 10.8272 -2.5244 20 6 1.7750 12.0785 -0.4039 21 6 4.0507 12.1004 -1.4355 22 6 4.8045 5.8939 -1.4071 23 6 3.5272 -0.6971 0.0066 24 6 2.2372 -1.1078 0.0005 25 6 1.7533 -2.5349 0.0017 26 8 0.4956 -2.6109 0.6757 27 14 2.9948 -3.6109 0.8801 28 1 -0.3634 0.0004 1.0277 29 1 -0.3634 0.8897 -0.5142 30 1 -0.3634 -0.8902 -0.5134 31 1 3.5205 3.3250 0.0001 32 1 6.1723 3.7137 0.8911 33 1 6.1730 3.7130 -0.8888 34 1 6.2465 6.8401 1.1080 35 1 7.1540 6.0217 -0.2357 36 1 4.0596 7.9274 0.5634 37 1 1.3067 10.2246 -2.3460 38 1 1.9281 11.7125 -3.1007 39 1 2.9277 10.2401 -3.0811 40 1 2.2045 12.3830 0.5506 41 1 1.5056 12.9640 -0.9797 42 1 0.8844 11.4757 -0.2258 43 1 4.7812 11.5133 -1.9921 44 1 3.7811 12.9858 -2.0110 45 1 4.4806 12.4049 -0.4811 46 1 5.3921 5.4086 -2.1863 47 1 3.7464 5.9691 -1.6585 48 1 4.4108 -1.3181 0.0123 49 1 1.6363 -2.8797 -1.0258 50 1 0.5249 -2.3188 1.5971 51 1 3.1870 -3.1316 2.2725 52 1 2.5295 -5.0211 0.8876 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_12628556_13259642.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 12:32:21 Heat of formation + Delta-G solvation = -43.001416 kcal Electronic energy + Delta-G solvation = -32997.081845 eV Core-core repulsion = 28387.232140 eV Total energy + Delta-G solvation = -4609.849705 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 367.199 amu Computer time = 1.38 seconds Orbital eigenvalues (eV) -43.84045 -41.96776 -40.85433 -40.02299 -38.17223 -37.96681 -35.89454 -35.23630 -34.43617 -33.82102 -32.63345 -29.61167 -28.38804 -28.32176 -28.11135 -26.75256 -26.67039 -24.89298 -23.80667 -22.97304 -22.18250 -21.17690 -21.08180 -20.17053 -19.37747 -19.13013 -17.69729 -17.61642 -17.51529 -17.27179 -17.19510 -16.99400 -16.56637 -16.29343 -15.90618 -15.82698 -15.65582 -15.43160 -15.19880 -15.11364 -14.86704 -14.68494 -14.47377 -14.08319 -13.85701 -13.67134 -13.49632 -13.40894 -13.36948 -13.23113 -12.97159 -12.92463 -12.88619 -12.68734 -12.49933 -12.35246 -12.29009 -12.01431 -11.96251 -11.77186 -11.41805 -11.35546 -11.19773 -11.13363 -11.07600 -10.32285 -10.19379 -9.98930 -9.97508 -4.88887 0.44378 0.82430 1.11544 1.22411 1.54525 1.67483 1.71018 1.94363 2.14111 2.31706 3.09297 3.09729 3.30835 3.34592 3.43132 3.56268 3.72250 3.75939 3.77364 3.82303 3.92461 4.01677 4.27137 4.28778 4.35466 4.43389 4.45733 4.49515 4.55991 4.59349 4.61147 4.64312 4.68335 4.70504 4.74520 4.78509 4.81115 4.83814 4.85798 4.88864 5.01067 5.05369 5.09590 5.16530 5.25187 5.25641 5.29841 5.38607 5.49099 5.61648 5.66961 6.27414 6.36968 6.38579 6.81538 7.12379 7.31908 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.078 3.922 2 N -0.265 5.265 3 N -0.266 5.266 4 C -0.040 4.040 5 C 0.601 3.399 6 O -0.566 6.566 7 N -0.707 5.707 8 C 0.129 3.871 9 C -0.111 4.111 10 H 0.110 0.890 11 C -0.122 4.122 12 C 0.130 3.870 13 H 0.092 0.908 14 N -0.682 5.682 15 C 0.645 3.355 16 O -0.593 6.593 17 O -0.369 6.369 18 C 0.127 3.873 19 C -0.180 4.180 20 C -0.138 4.138 21 C -0.180 4.180 22 C -0.145 4.145 23 C -0.187 4.187 24 C -0.013 4.013 25 C -0.044 4.044 26 O -0.538 6.538 27 Si 0.782 3.218 28 H 0.100 0.900 29 H 0.101 0.899 30 H 0.116 0.884 31 H 0.413 0.587 32 H 0.071 0.929 33 H 0.069 0.931 34 H 0.091 0.909 35 H 0.113 0.887 36 H 0.417 0.583 37 H 0.061 0.939 38 H 0.086 0.914 39 H 0.063 0.937 40 H 0.069 0.931 41 H 0.098 0.902 42 H 0.069 0.931 43 H 0.063 0.937 44 H 0.086 0.914 45 H 0.062 0.938 46 H 0.098 0.902 47 H 0.066 0.934 48 H 0.182 0.818 49 H 0.146 0.854 50 H 0.388 0.612 51 H -0.294 1.294 52 H -0.284 1.284 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.387 0.048 2.019 4.830 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.061 4.061 2 N -0.054 5.054 3 N -0.104 5.104 4 C -0.199 4.199 5 C 0.386 3.614 6 O -0.444 6.444 7 N -0.358 5.358 8 C 0.006 3.994 9 C -0.130 4.130 10 H 0.128 0.872 11 C -0.160 4.160 12 C 0.026 3.974 13 H 0.111 0.889 14 N -0.341 5.341 15 C 0.399 3.601 16 O -0.484 6.484 17 O -0.284 6.284 18 C 0.091 3.909 19 C -0.237 4.237 20 C -0.195 4.195 21 C -0.237 4.237 22 C -0.183 4.183 23 C -0.215 4.215 24 C -0.139 4.139 25 C -0.155 4.155 26 O -0.345 6.345 27 Si 0.685 3.315 28 H 0.119 0.881 29 H 0.119 0.881 30 H 0.134 0.866 31 H 0.250 0.750 32 H 0.089 0.911 33 H 0.087 0.913 34 H 0.110 0.890 35 H 0.131 0.869 36 H 0.254 0.746 37 H 0.081 0.919 38 H 0.105 0.895 39 H 0.082 0.918 40 H 0.089 0.911 41 H 0.117 0.883 42 H 0.088 0.912 43 H 0.082 0.918 44 H 0.105 0.895 45 H 0.081 0.919 46 H 0.116 0.884 47 H 0.085 0.915 48 H 0.199 0.801 49 H 0.163 0.837 50 H 0.238 0.762 51 H -0.221 1.221 52 H -0.210 1.210 Dipole moment (debyes) X Y Z Total from point charges -4.296 0.149 1.568 4.576 hybrid contribution -0.905 -0.035 0.873 1.258 sum -5.201 0.114 2.441 5.746 Atomic orbital electron populations 1.22600 0.70801 1.06677 1.06017 1.45686 1.08965 1.01930 1.48865 1.73457 1.02755 1.14741 1.19422 1.21858 0.90923 0.94570 1.12504 1.17036 0.86315 0.82193 0.75816 1.90791 1.23776 1.77813 1.52001 1.45802 1.11468 1.04759 1.73745 1.21485 0.87862 0.87454 1.02570 1.22814 0.99960 0.92116 0.98103 0.87220 1.23306 0.98351 0.94318 1.00028 1.21844 0.89897 0.88659 0.97049 0.88945 1.44353 1.45794 1.20940 1.23037 1.18331 0.78318 0.80815 0.82653 1.90911 1.59492 1.76190 1.21828 1.86309 1.56763 1.35057 1.50230 1.22354 0.95772 0.81370 0.91397 1.22470 1.01284 1.03411 0.96541 1.21891 0.97255 0.99441 1.00870 1.22475 0.97680 1.00706 1.02878 1.23555 1.02006 0.95532 0.97241 1.21729 0.97431 0.93536 1.08807 1.22188 0.91008 0.92085 1.08589 1.24850 0.93438 0.92062 1.05122 1.86579 1.29329 1.88547 1.30054 0.93217 0.83951 0.74795 0.79499 0.88137 0.88080 0.86565 0.75030 0.91114 0.91269 0.89039 0.86877 0.74600 0.91949 0.89483 0.91830 0.91149 0.88330 0.91169 0.91796 0.89481 0.91899 0.88357 0.91479 0.80108 0.83703 0.76201 1.22098 1.21024 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 -0.52 10.12 127.77 1.29 0.77 16 2 N -0.27 -0.07 3.70 -355.93 -1.32 -1.39 16 3 N -0.27 -1.10 11.67 -48.18 -0.56 -1.66 16 4 C -0.04 -0.26 7.13 42.46 0.30 0.05 16 5 C 0.60 4.78 7.82 86.75 0.68 5.46 16 6 O -0.57 -8.03 16.93 -3.94 -0.07 -8.10 16 7 N -0.71 -1.10 5.55 -466.11 -2.59 -3.69 16 8 C 0.13 -0.19 5.51 86.38 0.48 0.29 16 9 C -0.11 0.67 3.63 -10.27 -0.04 0.63 16 10 H 0.11 -0.87 8.14 -2.39 -0.02 -0.89 16 11 C -0.12 0.81 7.39 31.12 0.23 1.04 16 12 C 0.13 -0.25 4.32 45.52 0.20 -0.05 16 13 H 0.09 0.20 7.46 -2.39 -0.02 0.18 16 14 N -0.68 0.30 5.27 -567.60 -2.99 -2.69 16 15 C 0.65 4.08 8.06 129.79 1.05 5.13 16 16 O -0.59 -7.12 11.48 19.80 0.23 -6.89 16 17 O -0.37 -1.88 9.94 -55.42 -0.55 -2.44 16 18 C 0.13 0.36 1.13 -10.80 -0.01 0.34 16 19 C -0.18 -0.58 8.37 71.98 0.60 0.03 16 20 C -0.14 0.32 8.85 71.98 0.64 0.95 16 21 C -0.18 -0.57 8.37 71.98 0.60 0.03 16 22 C -0.14 0.46 7.43 31.12 0.23 0.70 16 23 C -0.19 -0.59 9.35 22.41 0.21 -0.38 16 24 C -0.01 0.00 6.18 41.40 0.26 0.26 16 25 C -0.04 0.21 2.87 71.24 0.20 0.41 16 26 O -0.54 2.57 10.40 -148.98 -1.55 1.02 16 27 Si 0.78 -2.92 31.22 68.60 2.14 -0.78 16 28 H 0.10 -0.98 8.14 -2.39 -0.02 -1.00 16 29 H 0.10 -0.79 8.14 -2.39 -0.02 -0.81 16 30 H 0.12 -0.94 6.77 -2.39 -0.02 -0.96 16 31 H 0.41 -0.53 8.20 -92.70 -0.76 -1.29 16 32 H 0.07 -0.02 8.14 -2.39 -0.02 -0.04 16 33 H 0.07 0.01 7.84 -2.39 -0.02 -0.01 16 34 H 0.09 -0.74 8.14 -2.39 -0.02 -0.75 16 35 H 0.11 -0.87 8.10 -2.39 -0.02 -0.89 16 36 H 0.42 -2.11 8.81 -92.71 -0.82 -2.92 16 37 H 0.06 0.15 8.14 -2.39 -0.02 0.13 16 38 H 0.09 -0.02 8.14 -2.38 -0.02 -0.04 16 39 H 0.06 0.55 5.88 -2.39 -0.01 0.54 16 40 H 0.07 -0.18 8.14 -2.39 -0.02 -0.20 16 41 H 0.10 -0.54 8.14 -2.38 -0.02 -0.56 16 42 H 0.07 -0.18 8.14 -2.39 -0.02 -0.20 16 43 H 0.06 0.55 5.88 -2.39 -0.01 0.53 16 44 H 0.09 -0.02 8.14 -2.39 -0.02 -0.04 16 45 H 0.06 0.15 8.14 -2.38 -0.02 0.13 16 46 H 0.10 -0.29 7.90 -2.39 -0.02 -0.31 16 47 H 0.07 -0.08 8.14 -2.38 -0.02 -0.10 16 48 H 0.18 -0.02 7.01 -2.91 -0.02 -0.04 16 49 H 0.15 -1.08 7.96 -2.38 -0.02 -1.10 16 50 H 0.39 -3.56 8.70 -74.06 -0.64 -4.21 16 51 H -0.29 -0.81 7.11 99.48 0.71 -0.10 16 52 H -0.28 -0.59 7.11 99.48 0.71 0.12 16 Total: 0.00 -24.23 423.29 -1.56 -25.79 By element: Atomic # 1 Polarization: -13.60 SS G_CDS: -1.22 Total: -14.82 kcal Atomic # 6 Polarization: 8.72 SS G_CDS: 6.92 Total: 15.64 kcal Atomic # 7 Polarization: -1.97 SS G_CDS: -7.46 Total: -9.43 kcal Atomic # 8 Polarization: -14.46 SS G_CDS: -1.94 Total: -16.40 kcal Atomic # 14 Polarization: -2.92 SS G_CDS: 2.14 Total: -0.78 kcal Total: -24.23 -1.56 -25.79 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_12628556_13259642.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -17.211 kcal (2) G-P(sol) polarization free energy of solvation -24.233 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -41.445 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.557 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.790 kcal (6) G-S(sol) free energy of system = (1) + (5) -43.001 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.38 seconds