Wall clock time and date at job start Thu Mar 4 2021 15:23:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42893 * 1 3 3 Si 1.86301 * 109.47119 * 2 1 4 4 C 1.50705 * 109.47560 * 120.00063 * 2 1 3 5 5 C 1.35004 * 126.42762 * 209.97786 * 4 2 1 6 6 N 1.33585 * 108.65508 * 180.02562 * 5 4 2 7 7 C 1.32418 * 109.22374 * 359.97438 * 6 5 4 8 8 C 1.41243 * 132.12346 * 180.02562 * 7 6 5 9 9 Br 1.89105 * 120.25323 * 359.97438 * 8 7 6 10 10 C 1.35709 * 119.49280 * 180.02562 * 8 7 6 11 11 C 1.41759 * 119.53253 * 359.97438 * 10 8 7 12 12 C 1.47574 * 120.01284 * 180.02562 * 11 10 8 13 13 O 1.21593 * 120.00121 * 179.97438 * 12 11 10 14 14 N 1.34778 * 119.99602 * 359.97438 * 12 11 10 15 15 C 1.46499 * 119.99646 * 180.02562 * 14 12 11 16 16 H 1.08997 * 112.85008 * 23.81263 * 15 14 12 17 17 C 1.53788 * 113.61284 * 155.00304 * 15 14 12 18 18 C 1.53785 * 87.08129 * 89.20195 * 17 15 14 19 19 H 1.08995 * 113.61217 * 270.80387 * 18 17 15 20 20 C 1.50696 * 113.61322 * 139.98087 * 18 17 15 21 21 O 1.20820 * 120.00117 * 0.02562 * 20 18 17 22 22 O 1.34230 * 119.99849 * 179.97438 * 20 18 17 23 23 C 1.45202 * 117.00165 * 180.02562 * 22 20 18 24 24 C 1.50703 * 109.47000 * 180.02562 * 23 22 20 25 25 C 1.38234 * 120.00257 * 90.00241 * 24 23 22 26 26 C 1.38238 * 119.99675 * 180.27927 * 25 24 23 27 27 C 1.38228 * 120.00120 * 359.47825 * 26 25 24 28 28 C 1.38234 * 120.00000 * 0.52176 * 27 26 25 29 29 C 1.38234 * 119.99503 * 270.01841 * 24 23 22 30 30 C 1.53783 * 113.69351 * 252.53802 * 15 14 12 31 31 C 1.36501 * 119.97650 * 0.27372 * 11 10 8 32 32 N 1.35943 * 120.50496 * 359.44746 * 31 11 10 33 33 H 0.96698 * 114.00438 * 60.00033 * 1 2 3 34 34 H 1.09005 * 109.47515 * 239.99992 * 2 1 3 35 35 H 1.48501 * 110.00275 * 60.00088 * 3 2 1 36 36 H 1.48503 * 110.00287 * 181.32152 * 3 2 1 37 37 H 1.08002 * 125.67652 * 359.97438 * 5 4 2 38 38 H 1.07995 * 120.23336 * 180.02562 * 10 8 7 39 39 H 0.96998 * 119.99982 * 0.02562 * 14 12 11 40 40 H 1.08998 * 113.61524 * 334.65154 * 17 15 14 41 41 H 1.08999 * 113.61659 * 203.74757 * 17 15 14 42 42 H 1.08988 * 109.47129 * 60.00054 * 23 22 20 43 43 H 1.09000 * 109.46640 * 300.00045 * 23 22 20 44 44 H 1.08002 * 119.99744 * 359.97438 * 25 24 23 45 45 H 1.08004 * 119.99577 * 179.72816 * 26 25 24 46 46 H 1.07999 * 119.99930 * 180.23492 * 27 26 25 47 47 H 1.08001 * 120.00310 * 179.72161 * 28 27 26 48 48 H 1.07997 * 120.00460 * 0.02562 * 29 24 23 49 49 H 1.08997 * 113.61604 * 156.32437 * 30 15 14 50 50 H 1.09000 * 113.61329 * 25.42340 * 30 15 14 51 51 H 1.08003 * 119.74319 * 179.70512 * 31 11 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7104 1.2305 5 6 3.0858 -0.4614 1.8847 6 7 3.1772 -1.2968 2.9231 7 6 2.1072 -2.0764 2.9510 8 6 1.7126 -3.1126 3.8259 9 35 2.8135 -3.5991 5.2844 10 6 0.5377 -3.7572 3.6113 11 6 -0.2754 -3.3804 2.5129 12 6 -1.5553 -4.0738 2.2699 13 8 -2.2529 -3.7501 1.3280 14 7 -1.9509 -5.0658 3.0921 15 6 -3.2212 -5.7545 2.8506 16 1 -3.5456 -5.6922 1.8119 17 6 -3.2683 -7.1798 3.4262 18 6 -3.7970 -6.5524 4.7270 19 1 -3.0099 -6.2589 5.4215 20 6 -4.8882 -7.3569 5.3851 21 8 -5.2639 -8.3896 4.8830 22 8 -5.4419 -6.9266 6.5296 23 6 -6.4871 -7.7524 7.1076 24 6 -6.9858 -7.1148 8.3787 25 6 -8.0375 -6.2188 8.3361 26 6 -8.4912 -5.6296 9.5015 27 6 -7.9001 -5.9446 10.7107 28 6 -6.8484 -6.8406 10.7533 29 6 -6.3912 -7.4258 9.5873 30 6 -4.3217 -5.3939 3.8624 31 6 0.1282 -2.3795 1.6772 32 7 1.3023 -1.7299 1.8951 33 1 -0.3934 0.4417 -0.7650 34 1 1.7923 -0.5138 -0.8900 35 1 1.5615 2.4679 1.2085 36 1 3.5345 1.7704 -0.0322 37 1 3.8146 0.2879 1.6132 38 1 0.2241 -4.5509 4.2730 39 1 -1.3946 -5.3237 3.8437 40 1 -2.2863 -7.6409 3.5315 41 1 -3.9902 -7.8278 2.9292 42 1 -6.0873 -8.7418 7.3295 43 1 -7.3109 -7.8438 6.3998 44 1 -8.5016 -5.9753 7.3917 45 1 -9.3100 -4.9262 9.4676 46 1 -8.2571 -5.4871 11.6216 47 1 -6.3837 -7.0834 11.6975 48 1 -5.5691 -8.1253 9.6206 49 1 -5.3316 -5.5537 3.4845 50 1 -4.1901 -4.4134 4.3198 51 1 -0.4921 -2.0987 0.8387 There are 77 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 77 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_12636046_12335884.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 15:23:01 Heat of formation + Delta-G solvation = 13.968745 kcal Electronic energy + Delta-G solvation = -38943.602319 eV Core-core repulsion = 33630.860807 eV Total energy + Delta-G solvation = -5312.741512 eV No. of doubly occupied orbitals = 77 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 486.067 amu Computer time = 2.19 seconds Orbital eigenvalues (eV) -44.36005 -42.13800 -41.25673 -40.20655 -39.39843 -38.39822 -37.89034 -37.47541 -35.53393 -34.55709 -33.21205 -32.54742 -31.96074 -31.88576 -30.32587 -28.67364 -27.08147 -26.86805 -26.83011 -25.55353 -24.18502 -23.58182 -22.91410 -22.56709 -22.22542 -22.05190 -20.50879 -19.45966 -18.90909 -18.68168 -18.52341 -18.22783 -17.94650 -17.59166 -17.49587 -17.38927 -16.96540 -16.41010 -16.27489 -16.07792 -16.02254 -15.95379 -15.65727 -15.54359 -15.30784 -15.00044 -14.69798 -14.63228 -14.38909 -14.21288 -14.15451 -13.93571 -13.73954 -13.46455 -13.42716 -13.37052 -13.31892 -13.10360 -12.95250 -12.82258 -12.16585 -12.11862 -12.09750 -11.86321 -11.77418 -11.72001 -11.67923 -11.54578 -11.40988 -11.39920 -11.33699 -10.76370 -10.33185 -10.08517 -9.91170 -9.87658 -9.14239 -5.00201 -0.95901 -0.44643 0.13399 0.14778 0.41372 0.89564 1.05529 1.08867 1.38884 1.63424 1.68024 1.71293 1.85830 2.01996 2.16449 2.68981 2.83414 2.96563 3.12978 3.21747 3.30885 3.32424 3.35996 3.49738 3.54011 3.66026 3.74689 3.78251 3.83289 3.99056 4.00675 4.09154 4.17261 4.21830 4.25058 4.29612 4.32452 4.37856 4.44929 4.50062 4.54243 4.65221 4.65631 4.70628 4.77715 4.89026 4.90831 4.95932 4.98424 5.06523 5.09833 5.32411 5.39628 5.47532 5.48646 5.51839 5.54559 5.99533 6.25383 6.32605 6.64432 6.74739 6.92608 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.570 6.570 2 C -0.051 4.051 3 Si 0.820 3.180 4 C -0.044 4.044 5 C 0.016 3.984 6 N -0.495 5.495 7 C 0.225 3.775 8 C -0.085 4.085 9 Br 0.007 6.993 10 C -0.018 4.018 11 C -0.173 4.173 12 C 0.587 3.413 13 O -0.557 6.557 14 N -0.689 5.689 15 C 0.125 3.875 16 H 0.106 0.894 17 C -0.116 4.116 18 C -0.108 4.108 19 H 0.152 0.848 20 C 0.471 3.529 21 O -0.535 6.535 22 O -0.354 6.354 23 C 0.108 3.892 24 C -0.113 4.113 25 C -0.108 4.108 26 C -0.131 4.131 27 C -0.116 4.116 28 C -0.131 4.131 29 C -0.107 4.107 30 C -0.129 4.129 31 C 0.171 3.829 32 N -0.358 5.358 33 H 0.415 0.585 34 H 0.110 0.890 35 H -0.309 1.309 36 H -0.272 1.272 37 H 0.200 0.800 38 H 0.192 0.808 39 H 0.417 0.583 40 H 0.105 0.895 41 H 0.103 0.897 42 H 0.081 0.919 43 H 0.080 0.920 44 H 0.132 0.868 45 H 0.142 0.858 46 H 0.142 0.858 47 H 0.142 0.858 48 H 0.134 0.866 49 H 0.096 0.904 50 H 0.092 0.908 51 H 0.197 0.803 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.089 1.484 -1.853 3.163 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.381 6.381 2 C -0.159 4.159 3 Si 0.722 3.278 4 C -0.155 4.155 5 C -0.133 4.133 6 N -0.214 5.214 7 C -0.021 4.021 8 C -0.167 4.167 9 Br 0.092 6.908 10 C -0.044 4.044 11 C -0.180 4.180 12 C 0.374 3.626 13 O -0.436 6.436 14 N -0.341 5.341 15 C 0.020 3.980 16 H 0.124 0.876 17 C -0.154 4.154 18 C -0.127 4.127 19 H 0.169 0.831 20 C 0.315 3.685 21 O -0.424 6.424 22 O -0.271 6.271 23 C 0.035 3.965 24 C -0.113 4.113 25 C -0.126 4.126 26 C -0.149 4.149 27 C -0.134 4.134 28 C -0.149 4.149 29 C -0.125 4.125 30 C -0.167 4.167 31 C 0.044 3.956 32 N -0.031 5.031 33 H 0.269 0.731 34 H 0.128 0.872 35 H -0.237 1.237 36 H -0.198 1.198 37 H 0.217 0.783 38 H 0.209 0.791 39 H 0.256 0.744 40 H 0.124 0.876 41 H 0.121 0.879 42 H 0.100 0.900 43 H 0.098 0.902 44 H 0.150 0.850 45 H 0.159 0.841 46 H 0.160 0.840 47 H 0.160 0.840 48 H 0.152 0.848 49 H 0.115 0.885 50 H 0.110 0.890 51 H 0.213 0.787 Dipole moment (debyes) X Y Z Total from point charges -1.069 1.513 -0.641 1.961 hybrid contribution -0.621 -0.649 -0.042 0.900 sum -1.691 0.864 -0.682 2.018 Atomic orbital electron populations 1.86320 1.16717 1.82721 1.52368 1.24693 0.86331 1.11291 0.93588 0.94121 0.77911 0.71394 0.84325 1.21667 0.96708 0.95314 1.01845 1.22662 0.97288 1.00755 0.92592 1.70782 1.20590 1.08184 1.21870 1.20782 0.89809 0.99977 0.91504 1.20572 0.98821 0.99341 0.98016 1.96835 1.66796 1.90386 1.36775 1.21425 0.89782 0.97757 0.95389 1.19268 0.98416 1.01239 0.99105 1.17404 0.83703 0.79602 0.81940 1.90852 1.55834 1.65664 1.31271 1.45339 1.22450 1.35234 1.31113 1.21767 0.83269 0.92339 1.00616 0.87567 1.23320 1.03930 0.95546 0.92639 1.22861 0.95698 0.97134 0.97008 0.83052 1.24127 0.82146 0.84117 0.78091 1.90680 1.62158 1.25565 1.64005 1.86601 1.50116 1.52317 1.38045 1.21859 0.89153 0.93089 0.92383 1.19584 0.97939 1.00195 0.93568 1.21309 0.96305 0.95461 0.99485 1.21474 1.00769 1.00256 0.92426 1.21601 0.95796 0.97176 0.98861 1.21481 0.97324 0.97161 0.98910 1.21315 0.99328 0.99727 0.92108 1.23383 0.99725 0.98024 0.95611 1.22317 0.84553 0.89500 0.99181 1.42721 1.15334 1.24042 1.20963 0.73106 0.87195 1.23743 1.19833 0.78304 0.79146 0.74368 0.87643 0.87852 0.90047 0.90215 0.84982 0.84064 0.83994 0.83981 0.84817 0.88522 0.88981 0.78660 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.57 2.32 10.89 -148.98 -1.62 0.69 16 2 C -0.05 0.18 3.05 71.24 0.22 0.39 16 3 Si 0.82 -4.42 31.28 68.60 2.15 -2.27 16 4 C -0.04 -0.22 6.28 41.01 0.26 0.03 16 5 C 0.02 0.12 10.44 83.68 0.87 0.99 16 6 N -0.50 -5.91 11.30 -194.11 -2.19 -8.10 16 7 C 0.22 2.03 7.59 134.18 1.02 3.05 16 8 C -0.09 -0.33 6.24 22.42 0.14 -0.19 16 9 Br 0.01 0.02 33.72 -20.37 -0.69 -0.66 16 10 C -0.02 0.04 9.26 22.55 0.21 0.25 16 11 C -0.17 0.00 5.84 -20.35 -0.12 -0.12 16 12 C 0.59 -0.02 7.76 86.71 0.67 0.65 16 13 O -0.56 -4.01 15.87 -4.01 -0.06 -4.07 16 14 N -0.69 4.49 5.22 -443.14 -2.31 2.18 16 15 C 0.13 -0.66 4.32 45.52 0.20 -0.47 16 16 H 0.11 -0.21 7.46 -2.39 -0.02 -0.22 16 17 C -0.12 0.75 7.15 31.12 0.22 0.97 16 18 C -0.11 0.62 4.14 -11.01 -0.05 0.57 16 19 H 0.15 -1.66 8.14 -2.39 -0.02 -1.68 16 20 C 0.47 0.82 7.48 71.23 0.53 1.35 16 21 O -0.53 -4.13 15.65 21.98 0.34 -3.79 16 22 O -0.35 -0.96 10.20 -51.42 -0.52 -1.49 16 23 C 0.11 0.22 5.59 71.24 0.40 0.62 16 24 C -0.11 -0.25 5.52 -19.87 -0.11 -0.36 16 25 C -0.11 -0.14 9.70 22.27 0.22 0.07 16 26 C -0.13 0.00 10.05 22.27 0.22 0.22 16 27 C -0.12 0.06 10.05 22.27 0.22 0.28 16 28 C -0.13 0.03 10.05 22.27 0.22 0.25 16 29 C -0.11 -0.11 9.70 22.27 0.22 0.10 16 30 C -0.13 0.67 7.43 31.12 0.23 0.90 16 31 C 0.17 0.58 9.91 83.65 0.83 1.41 16 32 N -0.36 -2.36 2.93 -337.71 -0.99 -3.35 16 33 H 0.42 -6.13 8.74 -74.06 -0.65 -6.78 16 34 H 0.11 -0.91 7.96 -2.38 -0.02 -0.93 16 35 H -0.31 -1.41 7.11 99.48 0.71 -0.70 16 36 H -0.27 0.47 6.91 99.48 0.69 1.16 16 37 H 0.20 0.56 6.77 -2.91 -0.02 0.55 16 38 H 0.19 -2.09 6.44 -2.91 -0.02 -2.11 16 39 H 0.42 -5.25 6.74 -92.71 -0.62 -5.87 16 40 H 0.11 -1.02 8.14 -2.39 -0.02 -1.04 16 41 H 0.10 -0.33 7.43 -2.39 -0.02 -0.34 16 42 H 0.08 0.12 8.08 -2.39 -0.02 0.10 16 43 H 0.08 0.14 8.08 -2.39 -0.02 0.12 16 44 H 0.13 -0.17 8.06 -2.91 -0.02 -0.19 16 45 H 0.14 -0.54 8.06 -2.91 -0.02 -0.56 16 46 H 0.14 -0.65 8.06 -2.91 -0.02 -0.67 16 47 H 0.14 -0.59 8.06 -2.91 -0.02 -0.62 16 48 H 0.13 -0.25 8.06 -2.91 -0.02 -0.27 16 49 H 0.10 -0.38 8.09 -2.39 -0.02 -0.40 16 50 H 0.09 -0.50 8.14 -2.39 -0.02 -0.52 16 51 H 0.20 0.54 6.20 -2.91 -0.02 0.52 16 Total: 0.00 -30.83 455.34 0.50 -30.33 By element: Atomic # 1 Polarization: -20.25 SS G_CDS: -0.22 Total: -20.47 kcal Atomic # 6 Polarization: 4.38 SS G_CDS: 6.63 Total: 11.01 kcal Atomic # 7 Polarization: -3.77 SS G_CDS: -5.50 Total: -9.27 kcal Atomic # 8 Polarization: -6.79 SS G_CDS: -1.87 Total: -8.65 kcal Atomic # 14 Polarization: -4.42 SS G_CDS: 2.15 Total: -2.27 kcal Atomic # 35 Polarization: 0.02 SS G_CDS: -0.69 Total: -0.66 kcal Total: -30.83 0.50 -30.33 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_12636046_12335884.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 44.301 kcal (2) G-P(sol) polarization free energy of solvation -30.833 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 13.468 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.501 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.332 kcal (6) G-S(sol) free energy of system = (1) + (5) 13.969 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.19 seconds