Wall clock time and date at job start Thu Mar 4 2021 13:11:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45202 * 1 3 3 C 1.34232 * 117.00391 * 2 1 4 4 O 1.20825 * 119.99481 * 0.02562 * 3 2 1 5 5 C 1.50702 * 119.99975 * 180.02562 * 3 2 1 6 6 N 1.46499 * 112.85097 * 324.06955 * 5 3 2 7 7 C 1.34779 * 120.00205 * 293.64461 * 6 5 3 8 8 O 1.21591 * 119.99839 * 354.97248 * 7 6 5 9 9 C 1.47568 * 120.00329 * 174.96682 * 7 6 5 10 10 C 1.36491 * 120.01248 * 179.97438 * 9 7 6 11 11 N 1.35951 * 120.50926 * 180.02562 * 10 9 7 12 12 C 1.36999 * 132.41562 * 180.02562 * 11 10 9 13 13 C 1.50697 * 126.42867 * 0.03327 * 12 11 10 14 14 O 1.42901 * 109.47189 * 329.95793 * 13 12 11 15 15 Si 1.86306 * 109.46796 * 209.96570 * 13 12 11 16 16 C 1.35008 * 107.14070 * 179.97438 * 12 11 10 17 17 N 1.33580 * 108.65618 * 0.02562 * 16 12 11 18 18 C 1.32412 * 109.22408 * 0.02562 * 17 16 12 19 19 C 1.41251 * 132.11534 * 180.02562 * 18 17 16 20 20 Br 1.89098 * 120.25631 * 359.95123 * 19 18 17 21 21 C 1.35707 * 119.48742 * 179.97438 * 19 18 17 22 22 C 1.53780 * 113.60907 * 192.87712 * 5 3 2 23 23 C 1.53780 * 87.07966 * 270.79707 * 22 5 3 24 24 H 1.09003 * 113.61293 * 89.12090 * 23 22 5 25 25 O 1.42902 * 113.62018 * 219.93677 * 23 22 5 26 26 C 1.53775 * 113.69129 * 95.34234 * 5 3 2 27 27 H 1.09003 * 109.47174 * 179.97438 * 1 2 3 28 28 H 1.08998 * 109.46651 * 300.00023 * 1 2 3 29 29 H 1.08997 * 109.46620 * 59.99602 * 1 2 3 30 30 H 0.96999 * 120.00218 * 113.64102 * 6 5 3 31 31 H 1.08001 * 119.75132 * 0.04570 * 10 9 7 32 32 H 1.08990 * 109.47403 * 89.96483 * 13 12 11 33 33 H 0.96697 * 114.00298 * 300.00852 * 14 13 12 34 34 H 1.48498 * 109.99992 * 179.97438 * 15 13 12 35 35 H 1.48498 * 109.99816 * 301.31306 * 15 13 12 36 36 H 1.08004 * 125.67273 * 180.27045 * 16 12 11 37 37 H 1.08007 * 120.23193 * 180.02562 * 21 19 18 38 38 H 1.08994 * 113.62170 * 25.34555 * 22 5 3 39 39 H 1.09003 * 113.61123 * 156.17132 * 22 5 3 40 40 H 0.96693 * 114.00591 * 180.02562 * 25 23 22 41 41 H 1.09000 * 113.61353 * 203.67773 * 26 5 3 42 42 H 1.09001 * 113.61228 * 334.57355 * 26 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0615 1.1960 0.0000 4 8 1.4034 2.2093 0.0005 5 6 3.5665 1.2747 -0.0006 6 7 4.1920 0.2127 0.7911 7 6 4.0243 0.1809 2.1281 8 8 3.4313 1.0827 2.6880 9 6 4.5602 -0.9484 2.9124 10 6 4.3909 -0.9805 4.2664 11 7 4.8809 -2.0157 4.9988 12 6 4.8532 -2.2934 6.3401 13 6 4.2201 -1.4490 7.4158 14 8 4.2688 -0.0734 7.0320 15 14 5.1486 -1.6809 9.0142 16 6 5.4983 -3.4661 6.5171 17 7 5.9163 -3.9076 5.3277 18 6 5.5547 -3.0447 4.3907 19 6 5.7427 -3.0325 2.9908 20 35 6.6685 -4.4458 2.1414 21 6 5.2542 -1.9985 2.2602 22 6 4.1098 2.6786 0.3135 23 6 4.0437 2.9565 -1.1975 24 1 3.0856 3.3596 -1.5258 25 8 5.1580 3.7021 -1.6919 26 6 4.1761 1.4382 -1.4028 27 1 -0.3634 -1.0277 -0.0005 28 1 -0.3632 0.5138 0.8900 29 1 -0.3632 0.5139 -0.8899 30 1 4.7269 -0.4678 0.3532 31 1 3.8634 -0.1776 4.7597 32 1 3.1819 -1.7518 7.5515 33 1 5.1641 0.2649 6.8936 34 1 4.5345 -0.8530 10.0831 35 1 5.1325 -3.1127 9.4078 36 1 5.6478 -3.9662 7.4626 37 1 5.3907 -1.9772 1.1890 38 1 3.4251 3.2907 0.9004 39 1 5.1236 2.6749 0.7141 40 1 5.1219 3.8803 -2.6416 41 1 5.2084 1.0954 -1.4728 42 1 3.5447 1.0489 -2.2015 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_22_12808048_12335884.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:11:29 Heat of formation + Delta-G solvation = -51.202345 kcal Electronic energy + Delta-G solvation = -33454.107646 eV Core-core repulsion = 28643.837712 eV Total energy + Delta-G solvation = -4810.269934 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 426.035 amu Computer time = 1.08 seconds Orbital eigenvalues (eV) -44.27406 -42.62140 -40.89342 -39.87207 -38.50618 -38.05969 -37.51005 -36.62646 -35.36801 -34.31273 -32.46186 -31.81299 -30.27539 -29.29639 -27.26850 -27.04153 -26.79665 -25.21269 -24.11079 -23.25523 -22.57484 -21.90402 -20.77535 -19.66742 -19.54938 -18.69479 -18.29895 -18.28392 -17.91662 -17.64539 -17.49905 -17.41741 -16.85962 -16.35724 -16.15119 -16.03566 -15.83586 -15.63069 -15.60753 -15.16148 -14.75855 -14.69073 -14.37441 -14.13939 -14.01467 -13.76340 -13.53607 -13.43409 -13.34440 -13.19983 -12.98759 -12.76620 -12.60964 -12.20213 -11.99219 -11.88040 -11.81126 -11.51188 -11.34101 -11.32387 -11.23752 -11.14940 -10.99985 -10.53781 -10.05911 -9.10205 -5.16374 -0.91881 -0.42117 0.18625 0.82175 0.90885 1.06504 1.28874 1.43507 1.49676 1.69309 1.79934 1.86435 2.20370 2.74541 2.86075 2.93677 3.00035 3.05207 3.24005 3.29076 3.37895 3.40710 3.41829 3.57955 3.81207 3.95403 4.05688 4.08222 4.15476 4.17892 4.23645 4.28161 4.37146 4.40615 4.43033 4.51737 4.55919 4.70873 4.87950 4.92884 5.01940 5.24575 5.24877 5.55426 6.01461 6.16187 6.49871 6.51606 6.55738 6.78259 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.351 6.351 3 C 0.478 3.522 4 O -0.486 6.486 5 C 0.157 3.843 6 N -0.702 5.702 7 C 0.580 3.420 8 O -0.515 6.515 9 C -0.171 4.171 10 C 0.167 3.833 11 N -0.354 5.354 12 C -0.084 4.084 13 C -0.039 4.039 14 O -0.541 6.541 15 Si 0.721 3.279 16 C 0.046 3.954 17 N -0.460 5.460 18 C 0.244 3.756 19 C -0.061 4.061 20 Br 0.010 6.990 21 C -0.041 4.041 22 C -0.104 4.104 23 C 0.081 3.919 24 H 0.097 0.903 25 O -0.551 6.551 26 C -0.156 4.156 27 H 0.105 0.895 28 H 0.066 0.934 29 H 0.066 0.934 30 H 0.410 0.590 31 H 0.195 0.805 32 H 0.123 0.877 33 H 0.382 0.618 34 H -0.246 1.246 35 H -0.248 1.248 36 H 0.191 0.809 37 H 0.155 0.845 38 H 0.098 0.902 39 H 0.111 0.889 40 H 0.384 0.616 41 H 0.119 0.881 42 H 0.089 0.911 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.093 -0.498 -2.996 3.688 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.267 6.267 3 C 0.318 3.682 4 O -0.371 6.371 5 C 0.069 3.931 6 N -0.356 5.356 7 C 0.367 3.633 8 O -0.390 6.390 9 C -0.178 4.178 10 C 0.041 3.959 11 N -0.027 5.027 12 C -0.195 4.195 13 C -0.150 4.150 14 O -0.346 6.346 15 Si 0.620 3.380 16 C -0.104 4.104 17 N -0.178 5.178 18 C -0.001 4.001 19 C -0.144 4.144 20 Br 0.095 6.905 21 C -0.067 4.067 22 C -0.142 4.142 23 C 0.021 3.979 24 H 0.115 0.885 25 O -0.356 6.356 26 C -0.194 4.194 27 H 0.123 0.877 28 H 0.084 0.916 29 H 0.085 0.915 30 H 0.247 0.753 31 H 0.212 0.788 32 H 0.140 0.860 33 H 0.230 0.770 34 H -0.170 1.170 35 H -0.172 1.172 36 H 0.208 0.792 37 H 0.172 0.828 38 H 0.117 0.883 39 H 0.129 0.871 40 H 0.232 0.768 41 H 0.137 0.863 42 H 0.107 0.893 Dipole moment (debyes) X Y Z Total from point charges 1.649 -1.179 -1.426 2.478 hybrid contribution -1.400 0.319 -0.981 1.739 sum 0.249 -0.860 -2.407 2.569 Atomic orbital electron populations 1.23374 0.75496 1.04172 1.02927 1.86493 1.23959 1.32644 1.83566 1.23074 0.90511 0.81972 0.72670 1.90711 1.65962 1.36308 1.44129 1.21062 0.85955 0.90661 0.95436 1.45545 1.53361 1.30462 1.06276 1.17561 0.79142 0.84819 0.81795 1.90899 1.41121 1.36921 1.70107 1.19111 1.07651 0.98430 0.92637 1.22166 0.92469 0.90087 0.91220 1.42623 1.36328 1.16353 1.07391 1.22095 1.12449 1.02555 0.82384 1.24943 1.05749 0.81575 1.02685 1.86514 1.33805 1.22933 1.91363 0.94095 0.88373 0.82067 0.73508 1.22518 0.97519 0.92845 0.97554 1.70870 1.23175 1.25759 0.97982 1.20445 0.99072 0.87003 0.93622 1.20444 1.05814 0.98245 0.89884 1.96867 1.73642 1.43605 1.76367 1.21075 0.94160 0.90776 1.00721 1.23333 1.03454 0.91445 0.95985 1.23210 0.90682 0.88795 0.95168 0.88530 1.86538 1.44415 1.75584 1.29069 1.24088 1.03259 0.99209 0.92839 0.87704 0.91562 0.91508 0.75250 0.78801 0.85973 0.77013 1.17017 1.17179 0.79206 0.82760 0.88302 0.87112 0.76818 0.86313 0.89268 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.01 10.56 101.05 1.07 1.05 16 2 O -0.35 -0.53 10.42 -39.26 -0.41 -0.93 16 3 C 0.48 1.08 6.45 36.01 0.23 1.31 16 4 O -0.49 -2.28 15.11 -18.75 -0.28 -2.57 16 5 C 0.16 -0.06 1.11 -132.16 -0.15 -0.20 16 6 N -0.70 1.15 5.08 -48.94 -0.25 0.90 16 7 C 0.58 0.39 7.41 -12.45 -0.09 0.30 16 8 O -0.51 -2.09 15.31 5.29 0.08 -2.01 16 9 C -0.17 0.05 5.84 -105.38 -0.61 -0.56 16 10 C 0.17 0.06 9.91 -16.36 -0.16 -0.10 16 11 N -0.35 -0.38 2.93 -58.10 -0.17 -0.55 16 12 C -0.08 -0.01 6.24 -81.43 -0.51 -0.52 16 13 C -0.04 0.06 3.06 36.00 0.11 0.17 16 14 O -0.54 0.70 10.90 -35.23 -0.38 0.31 16 15 Si 0.72 -2.03 31.34 -169.99 -5.33 -7.36 16 16 C 0.05 0.04 10.44 -17.94 -0.19 -0.15 16 17 N -0.46 -1.55 11.30 -12.70 -0.14 -1.69 16 18 C 0.24 0.59 7.59 -155.92 -1.18 -0.60 16 19 C -0.06 -0.05 6.24 -39.34 -0.25 -0.30 16 20 Br 0.01 0.01 33.72 -68.01 -2.29 -2.29 16 21 C -0.04 0.06 9.26 -39.14 -0.36 -0.30 16 22 C -0.10 -0.06 6.15 -25.92 -0.16 -0.22 16 23 C 0.08 -0.08 4.82 -25.92 -0.12 -0.21 16 24 H 0.10 -0.07 7.62 -51.93 -0.40 -0.47 16 25 O -0.55 0.46 13.67 -35.23 -0.48 -0.03 16 26 C -0.16 0.46 7.21 -25.92 -0.19 0.27 16 27 H 0.10 -0.28 8.14 -51.93 -0.42 -0.71 16 28 H 0.07 0.03 8.13 -51.93 -0.42 -0.39 16 29 H 0.07 -0.06 8.13 -51.93 -0.42 -0.48 16 30 H 0.41 -1.91 6.75 -40.82 -0.28 -2.19 16 31 H 0.20 0.07 6.19 -52.49 -0.32 -0.26 16 32 H 0.12 -0.17 7.96 -51.93 -0.41 -0.58 16 33 H 0.38 -1.75 8.70 45.56 0.40 -1.35 16 34 H -0.25 -0.06 7.11 56.52 0.40 0.34 16 35 H -0.25 0.30 6.80 56.52 0.38 0.68 16 36 H 0.19 -0.28 6.70 -52.48 -0.35 -0.63 16 37 H 0.15 -0.71 6.45 -52.48 -0.34 -1.05 16 38 H 0.10 0.27 7.64 -51.93 -0.40 -0.13 16 39 H 0.11 0.04 8.14 -51.93 -0.42 -0.38 16 40 H 0.38 -1.92 9.12 45.56 0.42 -1.50 16 41 H 0.12 -0.53 8.14 -51.93 -0.42 -0.95 16 42 H 0.09 -0.34 8.10 -51.93 -0.42 -0.76 16 LS Contribution 381.92 15.07 5.76 5.76 Total: 0.00 -11.42 381.92 -9.90 -21.33 By element: Atomic # 1 Polarization: -7.39 SS G_CDS: -3.43 Total: -10.82 kcal Atomic # 6 Polarization: 2.52 SS G_CDS: -2.57 Total: -0.05 kcal Atomic # 7 Polarization: -0.78 SS G_CDS: -0.56 Total: -1.34 kcal Atomic # 8 Polarization: -3.75 SS G_CDS: -1.48 Total: -5.23 kcal Atomic # 14 Polarization: -2.03 SS G_CDS: -5.33 Total: -7.36 kcal Atomic # 35 Polarization: 0.01 SS G_CDS: -2.29 Total: -2.29 kcal Total LS contribution 5.76 Total: 5.76 kcal Total: -11.42 -9.90 -21.33 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_12808048_12335884.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -29.877 kcal (2) G-P(sol) polarization free energy of solvation -11.421 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -41.298 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.904 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.325 kcal (6) G-S(sol) free energy of system = (1) + (5) -51.202 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.09 seconds