Wall clock time and date at job start Thu Mar 4 2021 13:11:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45202 * 1 3 3 C 1.34232 * 117.00391 * 2 1 4 4 O 1.20825 * 119.99481 * 0.02562 * 3 2 1 5 5 C 1.50702 * 119.99975 * 180.02562 * 3 2 1 6 6 N 1.46499 * 112.85097 * 324.06955 * 5 3 2 7 7 C 1.34779 * 120.00205 * 293.64461 * 6 5 3 8 8 O 1.21591 * 119.99839 * 354.97248 * 7 6 5 9 9 C 1.47568 * 120.00329 * 174.96682 * 7 6 5 10 10 C 1.36491 * 120.01248 * 179.97438 * 9 7 6 11 11 N 1.35951 * 120.50926 * 180.02562 * 10 9 7 12 12 C 1.36999 * 132.41562 * 180.02562 * 11 10 9 13 13 C 1.50697 * 126.42867 * 0.03327 * 12 11 10 14 14 O 1.42901 * 109.47189 * 329.95793 * 13 12 11 15 15 Si 1.86306 * 109.46796 * 209.96570 * 13 12 11 16 16 C 1.35008 * 107.14070 * 179.97438 * 12 11 10 17 17 N 1.33580 * 108.65618 * 0.02562 * 16 12 11 18 18 C 1.32412 * 109.22408 * 0.02562 * 17 16 12 19 19 C 1.41251 * 132.11534 * 180.02562 * 18 17 16 20 20 Br 1.89098 * 120.25631 * 359.95123 * 19 18 17 21 21 C 1.35707 * 119.48742 * 179.97438 * 19 18 17 22 22 C 1.53780 * 113.60907 * 192.87712 * 5 3 2 23 23 C 1.53780 * 87.07966 * 270.79707 * 22 5 3 24 24 H 1.09003 * 113.61293 * 89.12090 * 23 22 5 25 25 O 1.42902 * 113.62018 * 219.93677 * 23 22 5 26 26 C 1.53775 * 113.69129 * 95.34234 * 5 3 2 27 27 H 1.09003 * 109.47174 * 179.97438 * 1 2 3 28 28 H 1.08998 * 109.46651 * 300.00023 * 1 2 3 29 29 H 1.08997 * 109.46620 * 59.99602 * 1 2 3 30 30 H 0.96999 * 120.00218 * 113.64102 * 6 5 3 31 31 H 1.08001 * 119.75132 * 0.04570 * 10 9 7 32 32 H 1.08990 * 109.47403 * 89.96483 * 13 12 11 33 33 H 0.96697 * 114.00298 * 300.00852 * 14 13 12 34 34 H 1.48498 * 109.99992 * 179.97438 * 15 13 12 35 35 H 1.48498 * 109.99816 * 301.31306 * 15 13 12 36 36 H 1.08004 * 125.67273 * 180.27045 * 16 12 11 37 37 H 1.08007 * 120.23193 * 180.02562 * 21 19 18 38 38 H 1.08994 * 113.62170 * 25.34555 * 22 5 3 39 39 H 1.09003 * 113.61123 * 156.17132 * 22 5 3 40 40 H 0.96693 * 114.00591 * 180.02562 * 25 23 22 41 41 H 1.09000 * 113.61353 * 203.67773 * 26 5 3 42 42 H 1.09001 * 113.61228 * 334.57355 * 26 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0615 1.1960 0.0000 4 8 1.4034 2.2093 0.0005 5 6 3.5665 1.2747 -0.0006 6 7 4.1920 0.2127 0.7911 7 6 4.0243 0.1809 2.1281 8 8 3.4313 1.0827 2.6880 9 6 4.5602 -0.9484 2.9124 10 6 4.3909 -0.9805 4.2664 11 7 4.8809 -2.0157 4.9988 12 6 4.8532 -2.2934 6.3401 13 6 4.2201 -1.4490 7.4158 14 8 4.2688 -0.0734 7.0320 15 14 5.1486 -1.6809 9.0142 16 6 5.4983 -3.4661 6.5171 17 7 5.9163 -3.9076 5.3277 18 6 5.5547 -3.0447 4.3907 19 6 5.7427 -3.0325 2.9908 20 35 6.6685 -4.4458 2.1414 21 6 5.2542 -1.9985 2.2602 22 6 4.1098 2.6786 0.3135 23 6 4.0437 2.9565 -1.1975 24 1 3.0856 3.3596 -1.5258 25 8 5.1580 3.7021 -1.6919 26 6 4.1761 1.4382 -1.4028 27 1 -0.3634 -1.0277 -0.0005 28 1 -0.3632 0.5138 0.8900 29 1 -0.3632 0.5139 -0.8899 30 1 4.7269 -0.4678 0.3532 31 1 3.8634 -0.1776 4.7597 32 1 3.1819 -1.7518 7.5515 33 1 5.1641 0.2649 6.8936 34 1 4.5345 -0.8530 10.0831 35 1 5.1325 -3.1127 9.4078 36 1 5.6478 -3.9662 7.4626 37 1 5.3907 -1.9772 1.1890 38 1 3.4251 3.2907 0.9004 39 1 5.1236 2.6749 0.7141 40 1 5.1219 3.8803 -2.6416 41 1 5.2084 1.0954 -1.4728 42 1 3.5447 1.0489 -2.2015 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_12808048_12335884.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:11:28 Heat of formation + Delta-G solvation = -55.738272 kcal Electronic energy + Delta-G solvation = -33454.304339 eV Core-core repulsion = 28643.837712 eV Total energy + Delta-G solvation = -4810.466627 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 426.035 amu Computer time = 1.17 seconds Orbital eigenvalues (eV) -44.30304 -42.66701 -40.99378 -39.86107 -38.49467 -38.01789 -37.64766 -36.60002 -35.37558 -34.31506 -32.47020 -31.80580 -30.27988 -29.31564 -27.18637 -27.00038 -26.77412 -25.24767 -24.11700 -23.27823 -22.58317 -21.90790 -20.80413 -19.66396 -19.54678 -18.68529 -18.32605 -18.26317 -17.92663 -17.64947 -17.53849 -17.46590 -16.84328 -16.32653 -16.17479 -16.04548 -15.80598 -15.62826 -15.56544 -15.14479 -14.73757 -14.69752 -14.43999 -14.07689 -13.88459 -13.65968 -13.52213 -13.41131 -13.35270 -13.20137 -13.05282 -12.71998 -12.63050 -12.16193 -11.99255 -11.98226 -11.87329 -11.53039 -11.38572 -11.35018 -11.28043 -11.04577 -10.91436 -10.56368 -10.08063 -9.11382 -4.96330 -0.94307 -0.40408 0.18646 0.75183 0.94016 1.04295 1.33206 1.42491 1.64015 1.72569 1.77652 1.97291 2.17218 2.78121 2.95186 3.00401 3.11116 3.12482 3.27399 3.37202 3.42919 3.44585 3.45764 3.64652 3.81973 4.03663 4.11454 4.15115 4.19213 4.22065 4.31907 4.40279 4.47086 4.50554 4.58156 4.58533 4.68237 4.75785 4.81142 4.93567 5.05608 5.19599 5.24303 5.53293 6.10999 6.40193 6.44094 6.48808 6.79753 6.84489 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.353 6.353 3 C 0.474 3.526 4 O -0.519 6.519 5 C 0.155 3.845 6 N -0.684 5.684 7 C 0.582 3.418 8 O -0.553 6.553 9 C -0.165 4.165 10 C 0.163 3.837 11 N -0.356 5.356 12 C -0.081 4.081 13 C -0.045 4.045 14 O -0.554 6.554 15 Si 0.805 3.195 16 C 0.037 3.963 17 N -0.492 5.492 18 C 0.229 3.771 19 C -0.079 4.079 20 Br 0.008 6.992 21 C -0.022 4.022 22 C -0.112 4.112 23 C 0.083 3.917 24 H 0.089 0.911 25 O -0.565 6.565 26 C -0.133 4.133 27 H 0.131 0.869 28 H 0.052 0.948 29 H 0.071 0.929 30 H 0.427 0.573 31 H 0.192 0.808 32 H 0.119 0.881 33 H 0.396 0.604 34 H -0.288 1.288 35 H -0.265 1.265 36 H 0.208 0.792 37 H 0.189 0.811 38 H 0.068 0.932 39 H 0.112 0.888 40 H 0.401 0.599 41 H 0.143 0.857 42 H 0.106 0.894 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.949 -1.221 -4.387 5.425 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.268 6.268 3 C 0.315 3.685 4 O -0.406 6.406 5 C 0.066 3.934 6 N -0.340 5.340 7 C 0.369 3.631 8 O -0.432 6.432 9 C -0.173 4.173 10 C 0.037 3.963 11 N -0.029 5.029 12 C -0.192 4.192 13 C -0.154 4.154 14 O -0.361 6.361 15 Si 0.706 3.294 16 C -0.113 4.113 17 N -0.211 5.211 18 C -0.017 4.017 19 C -0.161 4.161 20 Br 0.093 6.907 21 C -0.047 4.047 22 C -0.151 4.151 23 C 0.023 3.977 24 H 0.107 0.893 25 O -0.374 6.374 26 C -0.171 4.171 27 H 0.149 0.851 28 H 0.071 0.929 29 H 0.090 0.910 30 H 0.268 0.732 31 H 0.209 0.791 32 H 0.137 0.863 33 H 0.246 0.754 34 H -0.214 1.214 35 H -0.191 1.191 36 H 0.225 0.775 37 H 0.206 0.794 38 H 0.087 0.913 39 H 0.131 0.869 40 H 0.252 0.748 41 H 0.161 0.839 42 H 0.124 0.876 Dipole moment (debyes) X Y Z Total from point charges 2.533 -1.929 -2.880 4.293 hybrid contribution -1.742 0.609 -0.537 1.922 sum 0.792 -1.319 -3.416 3.747 Atomic orbital electron populations 1.23572 0.74688 1.05777 1.02541 1.86489 1.24880 1.32248 1.83224 1.23608 0.91526 0.81689 0.71648 1.90693 1.66903 1.37323 1.45727 1.21062 0.84657 0.90360 0.97312 1.45398 1.52689 1.30448 1.05462 1.17684 0.78555 0.84434 0.82399 1.90895 1.42928 1.38344 1.70989 1.19058 1.07557 0.98349 0.92328 1.22211 0.92511 0.89913 0.91674 1.42697 1.36288 1.16255 1.07705 1.22345 1.11974 1.02482 0.82377 1.25181 1.05916 0.81313 1.02973 1.86487 1.35299 1.22958 1.91391 0.93059 0.86891 0.79240 0.70227 1.22851 0.97542 0.93175 0.97703 1.70831 1.24457 1.26815 0.98973 1.20729 0.99429 0.87237 0.94293 1.20556 1.06977 0.99034 0.89527 1.96851 1.73801 1.43990 1.76044 1.21366 0.92094 0.89143 1.02124 1.23336 1.02753 0.91942 0.97046 1.23087 0.90395 0.90342 0.93870 0.89349 1.86491 1.44266 1.75774 1.30854 1.24069 1.04635 0.97199 0.91200 0.85107 0.92870 0.91048 0.73185 0.79123 0.86349 0.75418 1.21449 1.19067 0.77521 0.79398 0.91333 0.86922 0.74765 0.83878 0.87597 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.56 113.37 1.20 1.18 16 2 O -0.35 -0.99 10.42 -51.44 -0.54 -1.53 16 3 C 0.47 2.36 6.45 71.24 0.46 2.82 16 4 O -0.52 -5.71 15.11 21.97 0.33 -5.38 16 5 C 0.15 -0.17 1.11 3.38 0.00 -0.16 16 6 N -0.68 2.98 5.08 -427.02 -2.17 0.82 16 7 C 0.58 0.75 7.41 86.70 0.64 1.39 16 8 O -0.55 -5.18 15.31 -4.00 -0.06 -5.24 16 9 C -0.17 0.16 5.84 -20.35 -0.12 0.04 16 10 C 0.16 0.20 9.91 83.65 0.83 1.03 16 11 N -0.36 -0.93 2.93 -337.72 -0.99 -1.92 16 12 C -0.08 -0.06 6.24 41.01 0.26 0.20 16 13 C -0.05 0.12 3.06 71.23 0.22 0.34 16 14 O -0.55 1.10 10.90 -148.98 -1.62 -0.52 16 15 Si 0.81 -4.38 31.34 68.60 2.15 -2.23 16 16 C 0.04 0.08 10.44 83.68 0.87 0.95 16 17 N -0.49 -3.59 11.30 -194.10 -2.19 -5.78 16 18 C 0.23 1.17 7.59 134.19 1.02 2.19 16 19 C -0.08 -0.10 6.24 22.42 0.14 0.04 16 20 Br 0.01 0.01 33.72 -20.37 -0.69 -0.68 16 21 C -0.02 0.09 9.26 22.55 0.21 0.29 16 22 C -0.11 -0.23 6.15 31.12 0.19 -0.04 16 23 C 0.08 -0.18 4.82 31.12 0.15 -0.03 16 24 H 0.09 -0.07 7.62 -2.39 -0.02 -0.08 16 25 O -0.57 1.36 13.67 -148.98 -2.04 -0.68 16 26 C -0.13 1.04 7.21 31.12 0.22 1.26 16 27 H 0.13 -0.82 8.14 -2.39 -0.02 -0.84 16 28 H 0.05 0.11 8.13 -2.39 -0.02 0.09 16 29 H 0.07 -0.11 8.13 -2.39 -0.02 -0.13 16 30 H 0.43 -5.05 6.75 -92.71 -0.63 -5.68 16 31 H 0.19 0.35 6.19 -2.91 -0.02 0.33 16 32 H 0.12 -0.24 7.96 -2.39 -0.02 -0.26 16 33 H 0.40 -3.49 8.70 -74.06 -0.64 -4.13 16 34 H -0.29 -0.44 7.11 99.48 0.71 0.26 16 35 H -0.27 0.67 6.80 99.48 0.68 1.35 16 36 H 0.21 -0.59 6.70 -2.91 -0.02 -0.61 16 37 H 0.19 -2.22 6.45 -2.91 -0.02 -2.24 16 38 H 0.07 0.56 7.64 -2.39 -0.02 0.54 16 39 H 0.11 0.13 8.14 -2.39 -0.02 0.11 16 40 H 0.40 -4.44 9.12 -74.06 -0.68 -5.12 16 41 H 0.14 -1.76 8.14 -2.39 -0.02 -1.78 16 42 H 0.11 -1.09 8.10 -2.39 -0.02 -1.11 16 Total: 0.00 -28.63 381.92 -2.31 -30.94 By element: Atomic # 1 Polarization: -18.52 SS G_CDS: -0.79 Total: -19.31 kcal Atomic # 6 Polarization: 5.21 SS G_CDS: 6.29 Total: 11.50 kcal Atomic # 7 Polarization: -1.53 SS G_CDS: -5.35 Total: -6.88 kcal Atomic # 8 Polarization: -9.42 SS G_CDS: -3.93 Total: -13.35 kcal Atomic # 14 Polarization: -4.38 SS G_CDS: 2.15 Total: -2.23 kcal Atomic # 35 Polarization: 0.01 SS G_CDS: -0.69 Total: -0.68 kcal Total: -28.63 -2.31 -30.94 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_12808048_12335884.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -24.798 kcal (2) G-P(sol) polarization free energy of solvation -28.627 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -53.425 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.314 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.940 kcal (6) G-S(sol) free energy of system = (1) + (5) -55.738 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.17 seconds