Wall clock time and date at job start Thu Mar 4 2021 13:11:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45206 * 1 3 3 C 1.34226 * 117.00195 * 2 1 4 4 O 1.20830 * 119.99678 * 359.97438 * 3 2 1 5 5 C 1.50704 * 120.00171 * 180.02562 * 3 2 1 6 6 N 1.46500 * 112.84362 * 324.05918 * 5 3 2 7 7 C 1.34778 * 120.00195 * 293.64042 * 6 5 3 8 8 O 1.21570 * 120.00044 * 354.99312 * 7 6 5 9 9 C 1.47713 * 119.99914 * 174.99134 * 7 6 5 10 10 N 1.31806 * 126.51647 * 0.02562 * 9 7 6 11 11 N 1.28469 * 110.07186 * 179.97438 * 10 9 7 12 12 C 1.46502 * 124.88444 * 179.97438 * 11 10 9 13 13 C 1.35036 * 110.23098 * 0.23053 * 11 10 9 14 14 C 1.50695 * 126.38529 * 179.72933 * 13 11 10 15 15 O 1.42901 * 109.47540 * 330.00563 * 14 13 11 16 16 Si 1.86297 * 109.47234 * 209.99755 * 14 13 11 17 17 C 1.35369 * 107.22545 * 359.62993 * 13 11 10 18 18 C 1.53783 * 113.61360 * 192.86654 * 5 3 2 19 19 C 1.53779 * 87.07780 * 270.79741 * 18 5 3 20 20 H 1.09000 * 113.61815 * 89.20052 * 19 18 5 21 21 O 1.42900 * 113.61527 * 220.02025 * 19 18 5 22 22 C 1.53775 * 113.69110 * 95.32730 * 5 3 2 23 23 H 1.09000 * 109.46684 * 179.97438 * 1 2 3 24 24 H 1.08997 * 109.46964 * 300.00084 * 1 2 3 25 25 H 1.08999 * 109.46622 * 60.00092 * 1 2 3 26 26 H 0.96999 * 119.99982 * 113.64971 * 6 5 3 27 27 H 1.08997 * 109.47225 * 90.03102 * 12 11 10 28 28 H 1.08997 * 109.47215 * 330.02608 * 12 11 10 29 29 H 1.09006 * 109.47155 * 210.02932 * 12 11 10 30 30 H 1.09006 * 109.46793 * 90.00042 * 14 13 11 31 31 H 0.96697 * 113.99259 * 299.99325 * 15 14 13 32 32 H 1.48505 * 110.00018 * 180.02562 * 16 14 13 33 33 H 1.48493 * 110.00473 * 301.32280 * 16 14 13 34 34 H 1.07998 * 127.24077 * 180.09782 * 17 13 11 35 35 H 1.09002 * 113.61136 * 25.34289 * 18 5 3 36 36 H 1.09001 * 113.61039 * 156.16316 * 18 5 3 37 37 H 0.96694 * 114.00337 * 180.02562 * 21 19 18 38 38 H 1.09002 * 113.61258 * 203.67715 * 22 5 3 39 39 H 1.08995 * 113.61540 * 334.57781 * 22 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4521 0.0000 0.0000 3 6 2.0615 1.1959 0.0000 4 8 1.4034 2.2093 -0.0005 5 6 3.5664 1.2748 -0.0006 6 7 4.1919 0.2128 0.7914 7 6 4.0242 0.1814 2.1283 8 8 3.4310 1.0830 2.6879 9 6 4.5610 -0.9487 2.9136 10 7 5.2209 -1.9878 2.4425 11 7 5.5405 -2.7794 3.4025 12 6 6.2798 -4.0341 3.2430 13 6 5.0919 -2.2915 4.5790 14 6 5.2602 -2.9296 5.9338 15 8 5.3103 -4.3503 5.7884 16 14 3.8200 -2.4670 7.0213 17 6 4.4650 -1.1212 4.3147 18 6 4.1098 2.6788 0.3133 19 6 4.0437 2.9563 -1.1978 20 1 3.0861 3.3607 -1.5260 21 8 5.1590 3.7002 -1.6926 22 6 4.1761 1.4380 -1.4029 23 1 -0.3633 -1.0277 -0.0005 24 1 -0.3633 0.5138 0.8900 25 1 -0.3632 0.5138 -0.8900 26 1 4.7269 -0.4676 0.3536 27 1 7.3489 -3.8390 3.3268 28 1 6.0640 -4.4611 2.2637 29 1 5.9766 -4.7358 4.0201 30 1 6.1864 -2.5780 6.3885 31 1 4.5170 -4.7329 5.3894 32 1 3.9743 -3.0896 8.3606 33 1 3.7378 -0.9903 7.1546 34 1 3.9880 -0.4607 5.0236 35 1 3.4249 3.2909 0.9000 36 1 5.1235 2.6751 0.7139 37 1 5.1229 3.8782 -2.6424 38 1 5.2084 1.0952 -1.4727 39 1 3.5448 1.0485 -2.2014 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_22_12808048_13259642.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:11:32 Heat of formation + Delta-G solvation = -69.234810 kcal Electronic energy + Delta-G solvation = -26839.637931 eV Core-core repulsion = 22753.082474 eV Total energy + Delta-G solvation = -4086.555456 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 312.125 amu Computer time = 0.68 seconds Orbital eigenvalues (eV) -43.84501 -42.39053 -40.34729 -39.44752 -38.29688 -37.38090 -36.42085 -34.54755 -33.91302 -32.55965 -29.28664 -28.65461 -27.13345 -27.01321 -26.17068 -24.26752 -22.90051 -22.19663 -20.98330 -20.61474 -19.39523 -19.07802 -18.18271 -17.76252 -17.69243 -17.53658 -17.26530 -17.12296 -16.75911 -16.11664 -15.80422 -15.64473 -15.44100 -15.40021 -15.05309 -14.53477 -14.25778 -14.04945 -13.89782 -13.80738 -13.64997 -13.57095 -13.24969 -13.08217 -12.65175 -12.48133 -12.40097 -11.85968 -11.79778 -11.75373 -11.66509 -11.13879 -11.01975 -10.98041 -10.32656 -10.11663 -9.96989 -5.11623 0.49327 0.78365 1.03506 1.10368 1.44978 1.57117 1.61027 1.87203 1.96327 2.40760 2.92068 3.01345 3.14227 3.24026 3.29895 3.40732 3.53909 3.67437 3.93724 4.07822 4.10510 4.17757 4.18349 4.27426 4.28028 4.39860 4.44297 4.50241 4.54385 4.61251 4.67160 4.69427 4.91637 5.01333 5.21704 5.29064 5.37821 5.60415 6.10776 6.32484 6.61025 6.69943 6.82534 7.14813 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.349 6.349 3 C 0.480 3.520 4 O -0.489 6.489 5 C 0.156 3.844 6 N -0.698 5.698 7 C 0.611 3.389 8 O -0.518 6.518 9 C -0.015 4.015 10 N -0.253 5.253 11 N -0.260 5.260 12 C 0.069 3.931 13 C -0.018 4.018 14 C -0.042 4.042 15 O -0.539 6.539 16 Si 0.717 3.283 17 C -0.175 4.175 18 C -0.104 4.104 19 C 0.081 3.919 20 H 0.097 0.903 21 O -0.551 6.551 22 C -0.155 4.155 23 H 0.104 0.896 24 H 0.066 0.934 25 H 0.065 0.935 26 H 0.415 0.585 27 H 0.084 0.916 28 H 0.094 0.906 29 H 0.121 0.879 30 H 0.126 0.874 31 H 0.383 0.617 32 H -0.248 1.248 33 H -0.249 1.249 34 H 0.166 0.834 35 H 0.098 0.902 36 H 0.109 0.891 37 H 0.383 0.617 38 H 0.117 0.883 39 H 0.087 0.913 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.099 -6.796 -2.393 7.205 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.265 6.265 3 C 0.320 3.680 4 O -0.374 6.374 5 C 0.068 3.932 6 N -0.353 5.353 7 C 0.396 3.604 8 O -0.390 6.390 9 C -0.174 4.174 10 N -0.091 5.091 11 N -0.049 5.049 12 C -0.071 4.071 13 C -0.143 4.143 14 C -0.153 4.153 15 O -0.345 6.345 16 Si 0.616 3.384 17 C -0.203 4.203 18 C -0.142 4.142 19 C 0.021 3.979 20 H 0.115 0.885 21 O -0.357 6.357 22 C -0.193 4.193 23 H 0.122 0.878 24 H 0.085 0.915 25 H 0.084 0.916 26 H 0.252 0.748 27 H 0.102 0.898 28 H 0.113 0.887 29 H 0.139 0.861 30 H 0.143 0.857 31 H 0.231 0.769 32 H -0.172 1.172 33 H -0.173 1.173 34 H 0.184 0.816 35 H 0.117 0.883 36 H 0.127 0.873 37 H 0.231 0.769 38 H 0.135 0.865 39 H 0.106 0.894 Dipole moment (debyes) X Y Z Total from point charges 0.382 -5.978 -1.347 6.140 hybrid contribution 0.258 -0.013 -0.421 0.494 sum 0.639 -5.992 -1.768 6.280 Atomic orbital electron populations 1.23360 0.75673 1.04079 1.02858 1.86509 1.23822 1.32661 1.83534 1.23106 0.90553 0.81897 0.72472 1.90697 1.66035 1.36319 1.44371 1.21026 0.85948 0.90847 0.95413 1.45569 1.53159 1.30217 1.06347 1.16915 0.78508 0.83779 0.81150 1.90857 1.41367 1.36410 1.70382 1.21581 1.06113 0.96240 0.93441 1.73513 1.15424 1.02285 1.17841 1.45378 1.38556 1.17936 1.03049 1.22669 0.96722 0.81435 1.06224 1.21899 1.04154 0.97782 0.90435 1.24864 1.12191 0.83101 0.95163 1.86473 1.44918 1.18192 1.84897 0.94071 0.83492 0.82230 0.78602 1.21524 1.05666 0.97886 0.95193 1.23328 1.03421 0.91674 0.95826 1.23234 0.90546 0.88854 0.95255 0.88528 1.86540 1.44449 1.75744 1.28938 1.24060 1.03215 0.99032 0.92982 0.87761 0.91538 0.91640 0.74771 0.89772 0.88700 0.86078 0.85727 0.76892 1.17204 1.17278 0.81627 0.88349 0.87258 0.76946 0.86457 0.89394 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.02 10.56 101.05 1.07 1.08 16 2 O -0.35 -1.04 10.42 -39.25 -0.41 -1.45 16 3 C 0.48 1.88 6.44 36.01 0.23 2.11 16 4 O -0.49 -2.94 15.12 -18.75 -0.28 -3.23 16 5 C 0.16 0.30 1.11 -132.16 -0.15 0.15 16 6 N -0.70 -1.15 5.13 -48.90 -0.25 -1.40 16 7 C 0.61 2.53 7.48 -12.39 -0.09 2.44 16 8 O -0.52 -3.71 15.97 5.30 0.08 -3.63 16 9 C -0.01 -0.05 7.13 -82.77 -0.59 -0.64 16 10 N -0.25 -0.47 11.68 33.42 0.39 -0.08 16 11 N -0.26 -0.01 3.70 -63.85 -0.24 -0.25 16 12 C 0.07 -0.23 11.01 59.85 0.66 0.43 16 13 C -0.02 0.00 6.18 -82.21 -0.51 -0.51 16 14 C -0.04 0.09 2.99 36.00 0.11 0.19 16 15 O -0.54 1.71 10.02 -35.23 -0.35 1.36 16 16 Si 0.72 -1.56 31.37 -169.99 -5.33 -6.89 16 17 C -0.17 -0.36 9.35 -39.36 -0.37 -0.72 16 18 C -0.10 -0.28 6.15 -25.92 -0.16 -0.44 16 19 C 0.08 0.05 4.82 -25.92 -0.13 -0.08 16 20 H 0.10 0.06 7.63 -51.93 -0.40 -0.34 16 21 O -0.55 -0.35 13.67 -35.23 -0.48 -0.83 16 22 C -0.15 0.15 7.21 -25.92 -0.19 -0.04 16 23 H 0.10 -0.22 8.14 -51.93 -0.42 -0.65 16 24 H 0.07 0.07 8.13 -51.93 -0.42 -0.35 16 25 H 0.06 -0.01 8.13 -51.93 -0.42 -0.43 16 26 H 0.42 -0.15 8.44 -40.82 -0.34 -0.50 16 27 H 0.08 -0.29 8.14 -51.93 -0.42 -0.72 16 28 H 0.09 -0.40 8.14 -51.93 -0.42 -0.83 16 29 H 0.12 -0.58 5.00 -51.93 -0.26 -0.84 16 30 H 0.13 -0.24 7.96 -51.93 -0.41 -0.65 16 31 H 0.38 -2.56 8.39 45.56 0.38 -2.18 16 32 H -0.25 -0.11 7.11 56.52 0.40 0.29 16 33 H -0.25 -0.16 6.83 56.52 0.39 0.22 16 34 H 0.17 0.29 6.84 -52.49 -0.36 -0.07 16 35 H 0.10 0.44 7.64 -51.93 -0.40 0.05 16 36 H 0.11 0.30 8.14 -51.93 -0.42 -0.12 16 37 H 0.38 -1.43 9.12 45.56 0.42 -1.02 16 38 H 0.12 -0.25 8.14 -51.93 -0.42 -0.67 16 39 H 0.09 -0.19 8.10 -51.93 -0.42 -0.61 16 LS Contribution 337.52 15.07 5.09 5.09 Total: 0.00 -10.85 337.52 -5.86 -16.71 By element: Atomic # 1 Polarization: -5.44 SS G_CDS: -3.96 Total: -9.40 kcal Atomic # 6 Polarization: 4.11 SS G_CDS: -0.11 Total: 3.99 kcal Atomic # 7 Polarization: -1.63 SS G_CDS: -0.10 Total: -1.72 kcal Atomic # 8 Polarization: -6.33 SS G_CDS: -1.44 Total: -7.77 kcal Atomic # 14 Polarization: -1.56 SS G_CDS: -5.33 Total: -6.89 kcal Total LS contribution 5.09 Total: 5.09 kcal Total: -10.85 -5.86 -16.71 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_12808048_13259642.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -52.523 kcal (2) G-P(sol) polarization free energy of solvation -10.852 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -63.375 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.860 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.712 kcal (6) G-S(sol) free energy of system = (1) + (5) -69.235 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.68 seconds