Wall clock time and date at job start Thu Mar 4 2021 14:44:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86306 * 109.47058 * 2 1 4 4 C 1.50704 * 109.47034 * 240.00234 * 2 1 3 5 5 C 1.35007 * 126.42567 * 149.97783 * 4 2 1 6 6 N 1.33585 * 108.65162 * 179.97438 * 5 4 2 7 7 C 1.32413 * 109.22446 * 359.97438 * 6 5 4 8 8 C 1.41258 * 132.11918 * 180.02562 * 7 6 5 9 9 Br 1.89091 * 120.25422 * 359.97438 * 8 7 6 10 10 C 1.35712 * 119.48728 * 179.97438 * 8 7 6 11 11 C 1.41756 * 119.53277 * 359.97438 * 10 8 7 12 12 C 1.47576 * 120.00759 * 179.97438 * 11 10 8 13 13 O 1.21597 * 119.99968 * 180.02562 * 12 11 10 14 14 N 1.34783 * 120.00088 * 0.02562 * 12 11 10 15 15 C 1.46499 * 119.99918 * 180.02562 * 14 12 11 16 16 C 1.52998 * 109.46882 * 180.02562 * 15 14 12 17 17 H 1.08997 * 112.85474 * 43.80022 * 16 15 14 18 18 C 1.53781 * 113.61406 * 174.99788 * 16 15 14 19 19 C 1.53786 * 87.17350 * 140.02181 * 18 16 15 20 20 H 1.09000 * 113.61138 * 220.06261 * 19 18 16 21 21 O 1.42894 * 113.61403 * 89.15805 * 19 18 16 22 22 C 1.53782 * 113.68747 * 272.53320 * 16 15 14 23 23 C 1.36498 * 119.98388 * 0.25754 * 11 10 8 24 24 N 1.35946 * 120.49829 * 359.48274 * 23 11 10 25 25 H 0.96707 * 113.99670 * 59.99972 * 1 2 3 26 26 H 1.08997 * 109.47150 * 120.00123 * 2 1 3 27 27 H 1.48504 * 109.99800 * 59.99935 * 3 2 1 28 28 H 1.48496 * 109.99965 * 181.31729 * 3 2 1 29 29 H 1.07991 * 125.67355 * 0.02562 * 5 4 2 30 30 H 1.07993 * 120.22630 * 179.97438 * 10 8 7 31 31 H 0.96999 * 119.99505 * 359.97438 * 14 12 11 32 32 H 1.08995 * 109.47324 * 59.99404 * 15 14 12 33 33 H 1.09003 * 109.46872 * 299.99751 * 15 14 12 34 34 H 1.09002 * 113.61445 * 254.61180 * 18 16 15 35 35 H 1.09002 * 113.61408 * 25.42911 * 18 16 15 36 36 H 0.96703 * 113.99734 * 180.02562 * 21 19 18 37 37 H 1.08997 * 113.61668 * 334.55355 * 22 16 15 38 38 H 1.08998 * 113.61674 * 105.37864 * 22 16 15 39 39 H 1.08002 * 119.74767 * 179.72465 * 23 11 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 3.0853 -0.4608 -1.8853 6 7 3.1767 -1.2963 -2.9236 7 6 2.1078 -2.0773 -2.9501 8 6 1.7140 -3.1150 -3.8240 9 35 2.8142 -3.6004 -5.2833 10 6 0.5401 -3.7608 -3.6081 11 6 -0.2725 -3.3847 -2.5091 12 6 -1.5513 -4.0795 -2.2649 13 8 -2.2484 -3.7564 -1.3225 14 7 -1.9466 -5.0721 -3.0865 15 6 -3.2164 -5.7615 -2.8444 16 6 -3.4247 -6.8367 -3.9127 17 1 -2.5229 -7.4154 -4.1125 18 6 -4.6735 -7.7032 -3.6793 19 6 -4.9077 -7.6403 -5.1979 20 1 -5.9555 -7.5211 -5.4735 21 8 -4.2579 -8.6874 -5.9211 22 6 -4.1183 -6.3185 -5.1837 23 6 0.1255 -2.3758 -1.6803 24 7 1.3039 -1.7322 -1.8932 25 1 -0.3933 0.4417 -0.7651 26 1 1.7923 -0.5138 0.8899 27 1 1.5614 2.4679 1.2085 28 1 3.5346 1.7704 -0.0321 29 1 3.8137 0.2890 -1.6143 30 1 0.2273 -4.5556 -4.2690 31 1 -1.3906 -5.3295 -3.8385 32 1 -4.0343 -5.0423 -2.8877 33 1 -3.1945 -6.2279 -1.8594 34 1 -4.4478 -8.7049 -3.3134 35 1 -5.4484 -7.2045 -3.0969 36 1 -4.4012 -8.6529 -6.8769 37 1 -4.7419 -5.4409 -5.0140 38 1 -3.4440 -6.2010 -6.0321 39 1 -0.4987 -2.0894 -0.8467 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_12857620_12335884.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 14:44:22 Heat of formation + Delta-G solvation = 12.904169 kcal Electronic energy + Delta-G solvation = -26279.567769 eV Core-core repulsion = 22237.668226 eV Total energy + Delta-G solvation = -4041.899543 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 382.036 amu Computer time = 0.88 seconds Orbital eigenvalues (eV) -44.29357 -41.30275 -40.24847 -38.51188 -38.01251 -36.58333 -35.43511 -34.90142 -32.68310 -31.85214 -30.29469 -29.04649 -26.90381 -26.66884 -25.50086 -24.11266 -23.42702 -22.58529 -21.92206 -20.57217 -19.50490 -18.93126 -18.25506 -17.86253 -17.75182 -17.53926 -16.98173 -16.64374 -16.21358 -16.08655 -15.99453 -15.78244 -15.64465 -15.25632 -15.01528 -14.70544 -14.43156 -14.06989 -13.86730 -13.42936 -13.37379 -13.32915 -13.07263 -12.90468 -12.69747 -12.17116 -12.15253 -11.82512 -11.57161 -11.39709 -11.36328 -11.28747 -11.14502 -10.90410 -10.62604 -10.29692 -10.02827 -9.11036 -4.95689 -0.92102 -0.39798 0.17787 0.95646 1.09882 1.40178 1.65871 1.77108 1.91719 2.01530 2.21665 2.78155 3.05529 3.16254 3.19661 3.34616 3.44678 3.45930 3.61737 3.63198 3.77310 3.83395 3.98588 4.10534 4.22994 4.29499 4.32649 4.40195 4.48213 4.53487 4.67296 4.80351 4.85517 4.90645 4.93877 5.07822 5.15378 5.24536 5.27404 5.45987 5.54637 6.29018 6.40980 6.49605 6.89258 6.95299 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.553 6.553 2 C -0.045 4.045 3 Si 0.806 3.194 4 C -0.080 4.080 5 C 0.035 3.965 6 N -0.493 5.493 7 C 0.227 3.773 8 C -0.080 4.080 9 Br 0.005 6.995 10 C -0.024 4.024 11 C -0.168 4.168 12 C 0.577 3.423 13 O -0.566 6.566 14 N -0.705 5.705 15 C 0.130 3.870 16 C -0.111 4.111 17 H 0.099 0.901 18 C -0.130 4.130 19 C 0.072 3.928 20 H 0.079 0.921 21 O -0.573 6.573 22 C -0.160 4.160 23 C 0.161 3.839 24 N -0.356 5.356 25 H 0.396 0.604 26 H 0.120 0.880 27 H -0.287 1.287 28 H -0.267 1.267 29 H 0.208 0.792 30 H 0.184 0.816 31 H 0.414 0.586 32 H 0.074 0.926 33 H 0.064 0.936 34 H 0.068 0.932 35 H 0.108 0.892 36 H 0.398 0.602 37 H 0.098 0.902 38 H 0.080 0.920 39 H 0.194 0.806 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.797 0.685 -4.083 5.618 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.361 6.361 2 C -0.153 4.153 3 Si 0.707 3.293 4 C -0.191 4.191 5 C -0.114 4.114 6 N -0.212 5.212 7 C -0.019 4.019 8 C -0.162 4.162 9 Br 0.091 6.909 10 C -0.049 4.049 11 C -0.176 4.176 12 C 0.363 3.637 13 O -0.447 6.447 14 N -0.357 5.357 15 C 0.008 3.992 16 C -0.130 4.130 17 H 0.118 0.882 18 C -0.168 4.168 19 C 0.013 3.987 20 H 0.097 0.903 21 O -0.382 6.382 22 C -0.197 4.197 23 C 0.035 3.965 24 N -0.029 5.029 25 H 0.246 0.754 26 H 0.137 0.863 27 H -0.214 1.214 28 H -0.192 1.192 29 H 0.225 0.775 30 H 0.201 0.799 31 H 0.252 0.748 32 H 0.092 0.908 33 H 0.083 0.917 34 H 0.087 0.913 35 H 0.127 0.873 36 H 0.248 0.752 37 H 0.116 0.884 38 H 0.099 0.901 39 H 0.211 0.789 Dipole moment (debyes) X Y Z Total from point charges -2.457 0.848 -2.925 3.913 hybrid contribution -0.549 -0.619 0.303 0.881 sum -3.006 0.229 -2.622 3.995 Atomic orbital electron populations 1.86487 1.17103 1.81743 1.50727 1.25189 0.85187 1.11515 0.93450 0.93057 0.78572 0.72578 0.85087 1.22370 0.98046 0.96266 1.02460 1.22852 0.96603 1.00220 0.91737 1.70825 1.20050 1.08047 1.22277 1.20697 0.89918 0.99795 0.91462 1.20559 0.98466 0.99231 0.97990 1.96841 1.66730 1.90536 1.36828 1.21348 0.90179 0.97943 0.95471 1.19251 0.98284 1.00881 0.99169 1.17565 0.84086 0.79940 0.82140 1.90851 1.56084 1.66357 1.31364 1.45746 1.23709 1.35277 1.30929 1.21493 0.84790 0.93978 0.98986 1.22673 0.99009 0.96163 0.95127 0.88232 1.23099 0.97947 1.00538 0.95207 1.22786 0.95589 0.87207 0.93130 0.90280 1.86421 1.75913 1.50804 1.25025 1.23747 0.99946 0.98027 0.98016 1.22254 0.85006 0.90347 0.98928 1.42712 1.14986 1.24081 1.21129 0.75399 0.86321 1.21365 1.19236 0.77518 0.79917 0.74770 0.90817 0.91719 0.91317 0.87337 0.75213 0.88392 0.90132 0.78892 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 1.22 10.90 -148.98 -1.62 -0.40 16 2 C -0.04 0.12 3.06 71.24 0.22 0.33 16 3 Si 0.81 -4.40 31.34 68.60 2.15 -2.25 16 4 C -0.08 -0.09 6.24 41.01 0.26 0.17 16 5 C 0.04 0.10 10.44 83.68 0.87 0.97 16 6 N -0.49 -4.01 11.30 -194.11 -2.19 -6.20 16 7 C 0.23 1.38 7.59 134.19 1.02 2.40 16 8 C -0.08 -0.21 6.24 22.43 0.14 -0.07 16 9 Br 0.01 0.01 33.72 -20.37 -0.69 -0.67 16 10 C -0.02 0.06 9.26 22.55 0.21 0.27 16 11 C -0.17 0.01 5.84 -20.35 -0.12 -0.11 16 12 C 0.58 0.90 7.76 86.71 0.67 1.57 16 13 O -0.57 -5.20 16.27 -4.02 -0.07 -5.27 16 14 N -0.70 2.89 5.51 -466.21 -2.57 0.32 16 15 C 0.13 -0.48 5.51 86.38 0.48 0.00 16 16 C -0.11 0.64 3.69 -10.27 -0.04 0.60 16 17 H 0.10 -0.50 8.14 -2.39 -0.02 -0.52 16 18 C -0.13 0.57 7.47 31.12 0.23 0.80 16 19 C 0.07 -0.35 5.29 31.18 0.16 -0.19 16 20 H 0.08 -0.53 8.14 -2.39 -0.02 -0.55 16 21 O -0.57 1.24 13.59 -148.98 -2.02 -0.79 16 22 C -0.16 1.15 7.47 31.18 0.23 1.38 16 23 C 0.16 0.28 9.91 83.65 0.83 1.11 16 24 N -0.36 -1.16 2.93 -337.70 -0.99 -2.15 16 25 H 0.40 -3.60 8.70 -74.05 -0.64 -4.25 16 26 H 0.12 -0.24 7.96 -2.39 -0.02 -0.26 16 27 H -0.29 -0.39 7.11 99.48 0.71 0.32 16 28 H -0.27 0.62 6.80 99.48 0.68 1.30 16 29 H 0.21 -0.49 6.70 -2.92 -0.02 -0.51 16 30 H 0.18 -1.73 6.44 -2.91 -0.02 -1.74 16 31 H 0.41 -3.87 6.51 -92.71 -0.60 -4.47 16 32 H 0.07 -0.21 7.85 -2.39 -0.02 -0.23 16 33 H 0.06 -0.07 8.14 -2.39 -0.02 -0.09 16 34 H 0.07 -0.11 8.14 -2.39 -0.02 -0.13 16 35 H 0.11 -0.71 8.10 -2.39 -0.02 -0.73 16 36 H 0.40 -3.95 9.12 -74.06 -0.68 -4.63 16 37 H 0.10 -0.79 7.90 -2.39 -0.02 -0.81 16 38 H 0.08 -0.63 8.14 -2.39 -0.02 -0.65 16 39 H 0.19 0.36 6.19 -2.91 -0.02 0.34 16 Total: 0.00 -22.17 351.41 -3.61 -25.78 By element: Atomic # 1 Polarization: -16.83 SS G_CDS: -0.77 Total: -17.60 kcal Atomic # 6 Polarization: 4.07 SS G_CDS: 5.17 Total: 9.24 kcal Atomic # 7 Polarization: -2.28 SS G_CDS: -5.75 Total: -8.04 kcal Atomic # 8 Polarization: -2.74 SS G_CDS: -3.71 Total: -6.46 kcal Atomic # 14 Polarization: -4.40 SS G_CDS: 2.15 Total: -2.25 kcal Atomic # 35 Polarization: 0.01 SS G_CDS: -0.69 Total: -0.67 kcal Total: -22.17 -3.61 -25.78 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_12857620_12335884.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 38.681 kcal (2) G-P(sol) polarization free energy of solvation -22.171 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 16.510 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.606 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.777 kcal (6) G-S(sol) free energy of system = (1) + (5) 12.904 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.88 seconds