Wall clock time and date at job start Thu Mar 4 2021 14:03:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 S 1.81402 * 1 3 3 O 1.42105 * 108.57359 * 2 1 4 4 O 1.42098 * 108.57868 * 228.97967 * 2 1 3 5 5 C 1.81395 * 101.92395 * 114.48921 * 2 1 3 6 6 H 1.08995 * 112.85150 * 311.19527 * 5 2 1 7 7 C 1.54054 * 113.69386 * 82.46913 * 5 2 1 8 8 C 1.53785 * 86.98555 * 139.98651 * 7 5 2 9 9 H 1.08994 * 113.61758 * 219.97454 * 8 7 5 10 10 N 1.46507 * 113.60937 * 89.16028 * 8 7 5 11 11 C 1.34772 * 119.99954 * 105.86915 * 10 8 7 12 12 O 1.21597 * 120.00088 * 359.97438 * 11 10 8 13 13 C 1.47573 * 120.00361 * 179.97438 * 11 10 8 14 14 C 1.36495 * 120.01296 * 179.97438 * 13 11 10 15 15 N 1.35951 * 120.50402 * 180.02562 * 14 13 11 16 16 C 1.36999 * 132.41014 * 179.97438 * 15 14 13 17 17 C 1.50702 * 126.42800 * 0.02562 * 16 15 14 18 18 O 1.42892 * 109.47242 * 29.99470 * 17 16 15 19 19 Si 1.86298 * 109.46915 * 150.00008 * 17 16 15 20 20 C 1.35004 * 107.13937 * 180.26596 * 16 15 14 21 21 N 1.33585 * 108.66062 * 359.60926 * 20 16 15 22 22 C 1.32415 * 109.21828 * 0.40303 * 21 20 16 23 23 C 1.41257 * 132.11876 * 179.73316 * 22 21 20 24 24 Br 1.89094 * 120.25176 * 0.04107 * 23 22 21 25 25 C 1.35705 * 119.49104 * 180.02562 * 23 22 21 26 26 C 1.53784 * 87.17338 * 334.57119 * 8 7 5 27 27 H 1.08997 * 109.47332 * 305.50563 * 1 2 3 28 28 H 1.08992 * 109.47866 * 65.51345 * 1 2 3 29 29 H 1.09001 * 109.46826 * 185.51239 * 1 2 3 30 30 H 1.09000 * 113.61468 * 25.48846 * 7 5 2 31 31 H 1.09002 * 113.69692 * 254.50540 * 7 5 2 32 32 H 0.96997 * 120.00283 * 285.85720 * 10 8 7 33 33 H 1.07994 * 119.74547 * 0.05350 * 14 13 11 34 34 H 1.09000 * 109.46724 * 269.99516 * 17 16 15 35 35 H 0.96703 * 114.00176 * 180.02562 * 18 17 16 36 36 H 1.48506 * 109.99834 * 178.68053 * 19 17 16 37 37 H 1.48502 * 110.00011 * 299.99318 * 19 17 16 38 38 H 1.08010 * 125.66980 * 179.75833 * 20 16 15 39 39 H 1.08001 * 120.23248 * 179.97438 * 25 23 22 40 40 H 1.09003 * 113.61560 * 140.01883 * 26 8 7 41 41 H 1.08994 * 113.61076 * 270.84048 * 26 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 16 1.8140 0.0000 0.0000 3 8 2.2667 1.3470 0.0000 4 8 2.2668 -0.8840 -1.0162 5 6 2.1888 -0.7357 1.6151 6 1 1.6290 -0.2762 2.4297 7 6 2.1358 -2.2753 1.6214 8 6 3.3795 -2.2335 2.5250 9 1 4.1162 -3.0015 2.2897 10 7 3.0645 -2.1663 3.9542 11 6 3.2307 -3.2538 4.7327 12 8 3.6417 -4.2909 4.2489 13 6 2.9139 -3.1861 6.1725 14 6 3.0817 -4.2875 6.9610 15 7 2.7925 -4.2364 8.2884 16 6 2.8666 -5.1715 9.2869 17 6 3.3248 -6.5999 9.1429 18 8 4.2858 -6.6880 8.0891 19 14 4.0997 -7.1673 10.7392 20 6 2.4470 -4.5747 10.4228 21 7 2.1293 -3.3068 10.1474 22 6 2.3271 -3.0781 8.8582 23 6 2.1456 -1.9257 8.0617 24 35 1.5056 -0.3237 8.8359 25 6 2.4344 -1.9771 6.7367 26 6 3.6948 -0.8648 1.8987 27 1 -0.3634 0.5968 0.8365 28 1 -0.3634 0.4259 -0.9351 29 1 -0.3633 -1.0229 0.0987 30 1 2.3207 -2.7225 0.6447 31 1 1.2520 -2.6812 2.1135 32 1 2.7364 -1.3391 4.3402 33 1 3.4474 -5.2063 6.5272 34 1 2.4696 -7.2339 8.9087 35 1 4.6249 -7.5812 7.9396 36 1 4.5271 -8.5846 10.6207 37 1 5.2670 -6.3109 11.0698 38 1 2.3816 -5.0438 11.3936 39 1 2.2997 -1.1033 6.1165 40 1 4.0686 -0.1327 2.6145 41 1 4.3061 -0.9271 0.9985 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_22_12912156_12335884.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 14:03:32 Heat of formation + Delta-G solvation = 7.550142 kcal Electronic energy + Delta-G solvation = -30600.606058 eV Core-core repulsion = 26045.180642 eV Total energy + Delta-G solvation = -4555.425416 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 430.008 amu Computer time = 3.32 seconds Orbital eigenvalues (eV) -44.23648 -41.65860 -39.83475 -38.47518 -38.08933 -38.01757 -37.09335 -35.48377 -34.61977 -32.49796 -31.91343 -30.74235 -30.27549 -27.44380 -27.20476 -26.93703 -25.34146 -24.09111 -22.60776 -22.12175 -21.29483 -19.89003 -19.38462 -18.89963 -18.74497 -18.23544 -17.94903 -17.45428 -17.31085 -17.17954 -17.01390 -16.44010 -16.35275 -16.04170 -15.83513 -15.57805 -15.22941 -14.93585 -14.67221 -14.54617 -14.34385 -14.21150 -14.18327 -14.02958 -13.89025 -13.48356 -13.36455 -13.15960 -13.05176 -12.99567 -12.90758 -12.37089 -12.24292 -12.21145 -12.05276 -11.57087 -11.46084 -11.35716 -11.30879 -11.25481 -11.01551 -10.45754 -10.02365 -9.05972 -5.16025 -1.13554 -0.88724 -0.41267 0.18971 0.83889 1.13957 1.28732 1.46702 1.56856 1.76620 1.78095 1.85358 2.20537 2.36715 2.61192 2.66675 2.82146 2.92849 3.07056 3.15927 3.28435 3.32279 3.39042 3.45927 3.52056 3.70559 3.85457 3.87734 3.99863 4.10005 4.19228 4.21596 4.24930 4.33792 4.40224 4.43615 4.47372 4.53592 4.56912 4.65948 4.95798 5.15906 5.25854 5.57846 6.07118 6.08183 6.50366 6.82119 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.655 4.655 2 S 2.425 3.575 3 O -0.937 6.937 4 O -0.933 6.933 5 C -0.613 4.613 6 H 0.152 0.848 7 C -0.125 4.125 8 C 0.133 3.867 9 H 0.119 0.881 10 N -0.706 5.706 11 C 0.582 3.418 12 O -0.523 6.523 13 C -0.181 4.181 14 C 0.179 3.821 15 N -0.354 5.354 16 C -0.038 4.038 17 C -0.046 4.046 18 O -0.545 6.545 19 Si 0.714 3.286 20 C 0.049 3.951 21 N -0.458 5.458 22 C 0.242 3.758 23 C -0.063 4.063 24 Br 0.009 6.991 25 C -0.043 4.043 26 C -0.113 4.113 27 H 0.128 0.872 28 H 0.130 0.870 29 H 0.129 0.871 30 H 0.118 0.882 31 H 0.092 0.908 32 H 0.403 0.597 33 H 0.192 0.808 34 H 0.087 0.913 35 H 0.391 0.609 36 H -0.252 1.252 37 H -0.250 1.250 38 H 0.198 0.802 39 H 0.153 0.847 40 H 0.097 0.903 41 H 0.112 0.888 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.557 -2.771 2.352 5.086 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.804 4.804 2 S 2.607 3.393 3 O -0.934 6.934 4 O -0.930 6.930 5 C -0.722 4.722 6 H 0.170 0.830 7 C -0.165 4.165 8 C 0.027 3.973 9 H 0.137 0.863 10 N -0.358 5.358 11 C 0.369 3.631 12 O -0.400 6.400 13 C -0.188 4.188 14 C 0.053 3.947 15 N -0.026 5.026 16 C -0.149 4.149 17 C -0.155 4.155 18 O -0.353 6.353 19 Si 0.611 3.389 20 C -0.101 4.101 21 N -0.176 5.176 22 C -0.004 4.004 23 C -0.145 4.145 24 Br 0.095 6.905 25 C -0.069 4.069 26 C -0.152 4.152 27 H 0.147 0.853 28 H 0.149 0.851 29 H 0.148 0.852 30 H 0.137 0.863 31 H 0.110 0.890 32 H 0.239 0.761 33 H 0.209 0.791 34 H 0.104 0.896 35 H 0.241 0.759 36 H -0.177 1.177 37 H -0.174 1.174 38 H 0.215 0.785 39 H 0.171 0.829 40 H 0.116 0.884 41 H 0.130 0.870 Dipole moment (debyes) X Y Z Total from point charges -2.597 -1.782 2.625 4.100 hybrid contribution -0.077 -1.083 -0.972 1.457 sum -2.673 -2.865 1.652 4.252 Atomic orbital electron populations 1.30236 1.26533 1.11693 1.11956 1.07768 0.78515 0.75616 0.77388 1.93621 1.79122 1.34228 1.86390 1.93620 1.79181 1.67134 1.53071 1.31883 1.07318 1.09109 1.23886 0.83025 1.23311 1.00775 0.89489 1.02886 1.21729 0.97650 0.98646 0.79276 0.86344 1.45443 1.67851 1.14037 1.08491 1.17469 0.77381 0.83686 0.84605 1.90865 1.45039 1.29482 1.74593 1.19168 1.10902 0.93937 0.94811 1.22097 0.91255 1.00818 0.80564 1.42584 1.41507 1.11469 1.07080 1.20912 1.13967 0.92037 0.88003 1.24471 0.95574 0.92630 1.02793 1.86467 1.60226 1.35677 1.52967 0.94658 0.85151 0.79656 0.79443 1.22370 1.00076 0.89895 0.97777 1.70877 1.21825 1.15911 1.09016 1.20403 1.02852 0.86861 0.90249 1.20434 1.08061 0.92366 0.93645 1.96860 1.85897 1.23860 1.83932 1.21044 0.95329 0.97592 0.92966 1.22999 0.90874 0.98054 1.03225 0.85320 0.85126 0.85210 0.86341 0.88978 0.76103 0.79120 0.89560 0.75874 1.17675 1.17373 0.78518 0.82938 0.88443 0.87004 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 48. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.65 3.10 10.62 101.05 1.07 4.17 16 2 S 2.43 -5.28 5.34 -107.50 -0.57 -5.85 16 3 O -0.94 -1.96 18.10 -57.83 -1.05 -3.00 16 4 O -0.93 -1.45 17.20 -57.83 -0.99 -2.45 16 5 C -0.61 2.89 4.06 -25.77 -0.10 2.79 16 6 H 0.15 -1.15 8.14 -51.93 -0.42 -1.57 16 7 C -0.13 0.48 7.44 -25.77 -0.19 0.29 16 8 C 0.13 -0.37 4.30 -67.11 -0.29 -0.66 16 9 H 0.12 -0.17 7.50 -51.93 -0.39 -0.56 16 10 N -0.71 2.05 5.22 -54.04 -0.28 1.76 16 11 C 0.58 0.04 7.76 -12.45 -0.10 -0.05 16 12 O -0.52 -1.81 15.89 5.28 0.08 -1.72 16 13 C -0.18 0.02 5.84 -105.37 -0.61 -0.59 16 14 C 0.18 0.21 9.91 -16.36 -0.16 0.04 16 15 N -0.35 -0.71 2.93 -58.09 -0.17 -0.88 16 16 C -0.04 -0.03 6.27 -81.43 -0.51 -0.54 16 17 C -0.05 0.09 3.05 36.01 0.11 0.20 16 18 O -0.54 0.58 10.88 -35.23 -0.38 0.19 16 19 Si 0.71 -2.07 31.19 -169.99 -5.30 -7.38 16 20 C 0.05 0.03 10.44 -17.94 -0.19 -0.16 16 21 N -0.46 -1.57 11.30 -12.70 -0.14 -1.71 16 22 C 0.24 0.70 7.59 -155.91 -1.18 -0.49 16 23 C -0.06 -0.07 6.24 -39.34 -0.25 -0.31 16 24 Br 0.01 0.01 33.72 -68.01 -2.29 -2.29 16 25 C -0.04 0.05 9.26 -39.14 -0.36 -0.31 16 26 C -0.11 0.42 7.41 -25.91 -0.19 0.23 16 27 H 0.13 -0.83 8.14 -51.93 -0.42 -1.25 16 28 H 0.13 -0.58 8.14 -51.93 -0.42 -1.01 16 29 H 0.13 -0.81 8.14 -51.92 -0.42 -1.23 16 30 H 0.12 -0.43 7.38 -51.93 -0.38 -0.81 16 31 H 0.09 -0.42 8.14 -51.93 -0.42 -0.84 16 32 H 0.40 -2.22 6.74 -40.82 -0.27 -2.49 16 33 H 0.19 0.21 6.19 -52.49 -0.32 -0.12 16 34 H 0.09 -0.33 7.96 -51.93 -0.41 -0.74 16 35 H 0.39 -1.96 8.74 45.56 0.40 -1.56 16 36 H -0.25 0.29 7.11 56.52 0.40 0.69 16 37 H -0.25 -0.28 7.11 56.52 0.40 0.12 16 38 H 0.20 -0.70 6.91 -52.48 -0.36 -1.06 16 39 H 0.15 -0.72 6.44 -52.49 -0.34 -1.06 16 40 H 0.10 -0.46 8.14 -51.93 -0.42 -0.89 16 41 H 0.11 -0.42 8.10 -51.93 -0.42 -0.84 16 LS Contribution 380.99 15.07 5.74 5.74 Total: 0.00 -15.61 380.99 -12.56 -28.17 By element: Atomic # 1 Polarization: -10.97 SS G_CDS: -4.24 Total: -15.21 kcal Atomic # 6 Polarization: 7.58 SS G_CDS: -2.96 Total: 4.62 kcal Atomic # 7 Polarization: -0.23 SS G_CDS: -0.60 Total: -0.83 kcal Atomic # 8 Polarization: -4.64 SS G_CDS: -2.34 Total: -6.98 kcal Atomic # 14 Polarization: -2.07 SS G_CDS: -5.30 Total: -7.38 kcal Atomic # 16 Polarization: -5.28 SS G_CDS: -0.57 Total: -5.85 kcal Atomic # 35 Polarization: 0.01 SS G_CDS: -2.29 Total: -2.29 kcal Total LS contribution 5.74 Total: 5.74 kcal Total: -15.61 -12.56 -28.17 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_12912156_12335884.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 35.720 kcal (2) G-P(sol) polarization free energy of solvation -15.606 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 20.115 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.564 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.170 kcal (6) G-S(sol) free energy of system = (1) + (5) 7.550 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 3.32 seconds