Wall clock time and date at job start Thu Mar 4 2021 14:03:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 S 1.81402 * 1 3 3 O 1.42105 * 108.57359 * 2 1 4 4 O 1.42098 * 108.57868 * 228.97967 * 2 1 3 5 5 C 1.81395 * 101.92395 * 114.48921 * 2 1 3 6 6 H 1.08995 * 112.85150 * 311.19527 * 5 2 1 7 7 C 1.54054 * 113.69386 * 82.46913 * 5 2 1 8 8 C 1.53785 * 86.98555 * 139.98651 * 7 5 2 9 9 H 1.08994 * 113.61758 * 219.97454 * 8 7 5 10 10 N 1.46507 * 113.60937 * 89.16028 * 8 7 5 11 11 C 1.34772 * 119.99954 * 105.86915 * 10 8 7 12 12 O 1.21597 * 120.00088 * 359.97438 * 11 10 8 13 13 C 1.47573 * 120.00361 * 179.97438 * 11 10 8 14 14 C 1.36495 * 120.01296 * 179.97438 * 13 11 10 15 15 N 1.35951 * 120.50402 * 180.02562 * 14 13 11 16 16 C 1.36999 * 132.41014 * 179.97438 * 15 14 13 17 17 C 1.50702 * 126.42800 * 0.02562 * 16 15 14 18 18 O 1.42892 * 109.47242 * 29.99470 * 17 16 15 19 19 Si 1.86298 * 109.46915 * 150.00008 * 17 16 15 20 20 C 1.35004 * 107.13937 * 180.26596 * 16 15 14 21 21 N 1.33585 * 108.66062 * 359.60926 * 20 16 15 22 22 C 1.32415 * 109.21828 * 0.40303 * 21 20 16 23 23 C 1.41257 * 132.11876 * 179.73316 * 22 21 20 24 24 Br 1.89094 * 120.25176 * 0.04107 * 23 22 21 25 25 C 1.35705 * 119.49104 * 180.02562 * 23 22 21 26 26 C 1.53784 * 87.17338 * 334.57119 * 8 7 5 27 27 H 1.08997 * 109.47332 * 305.50563 * 1 2 3 28 28 H 1.08992 * 109.47866 * 65.51345 * 1 2 3 29 29 H 1.09001 * 109.46826 * 185.51239 * 1 2 3 30 30 H 1.09000 * 113.61468 * 25.48846 * 7 5 2 31 31 H 1.09002 * 113.69692 * 254.50540 * 7 5 2 32 32 H 0.96997 * 120.00283 * 285.85720 * 10 8 7 33 33 H 1.07994 * 119.74547 * 0.05350 * 14 13 11 34 34 H 1.09000 * 109.46724 * 269.99516 * 17 16 15 35 35 H 0.96703 * 114.00176 * 180.02562 * 18 17 16 36 36 H 1.48506 * 109.99834 * 178.68053 * 19 17 16 37 37 H 1.48502 * 110.00011 * 299.99318 * 19 17 16 38 38 H 1.08010 * 125.66980 * 179.75833 * 20 16 15 39 39 H 1.08001 * 120.23248 * 179.97438 * 25 23 22 40 40 H 1.09003 * 113.61560 * 140.01883 * 26 8 7 41 41 H 1.08994 * 113.61076 * 270.84048 * 26 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 16 1.8140 0.0000 0.0000 3 8 2.2667 1.3470 0.0000 4 8 2.2668 -0.8840 -1.0162 5 6 2.1888 -0.7357 1.6151 6 1 1.6290 -0.2762 2.4297 7 6 2.1358 -2.2753 1.6214 8 6 3.3795 -2.2335 2.5250 9 1 4.1162 -3.0015 2.2897 10 7 3.0645 -2.1663 3.9542 11 6 3.2307 -3.2538 4.7327 12 8 3.6417 -4.2909 4.2489 13 6 2.9139 -3.1861 6.1725 14 6 3.0817 -4.2875 6.9610 15 7 2.7925 -4.2364 8.2884 16 6 2.8666 -5.1715 9.2869 17 6 3.3248 -6.5999 9.1429 18 8 4.2858 -6.6880 8.0891 19 14 4.0997 -7.1673 10.7392 20 6 2.4470 -4.5747 10.4228 21 7 2.1293 -3.3068 10.1474 22 6 2.3271 -3.0781 8.8582 23 6 2.1456 -1.9257 8.0617 24 35 1.5056 -0.3237 8.8359 25 6 2.4344 -1.9771 6.7367 26 6 3.6948 -0.8648 1.8987 27 1 -0.3634 0.5968 0.8365 28 1 -0.3634 0.4259 -0.9351 29 1 -0.3633 -1.0229 0.0987 30 1 2.3207 -2.7225 0.6447 31 1 1.2520 -2.6812 2.1135 32 1 2.7364 -1.3391 4.3402 33 1 3.4474 -5.2063 6.5272 34 1 2.4696 -7.2339 8.9087 35 1 4.6249 -7.5812 7.9396 36 1 4.5271 -8.5846 10.6207 37 1 5.2670 -6.3109 11.0698 38 1 2.3816 -5.0438 11.3936 39 1 2.2997 -1.1033 6.1165 40 1 4.0686 -0.1327 2.6145 41 1 4.3061 -0.9271 0.9985 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_12912156_12335884.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 14:03:31 Heat of formation + Delta-G solvation = -1.021266 kcal Electronic energy + Delta-G solvation = -30600.977742 eV Core-core repulsion = 26045.180642 eV Total energy + Delta-G solvation = -4555.797100 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 430.008 amu Computer time = 1.06 seconds Orbital eigenvalues (eV) -44.24740 -41.57416 -39.70132 -38.41385 -38.02838 -37.97147 -37.04364 -35.48020 -34.55816 -32.48963 -31.87819 -30.39268 -30.26897 -27.28367 -26.90935 -26.84919 -25.27572 -24.07689 -22.59142 -22.07241 -21.12895 -19.72032 -19.33108 -18.78359 -18.67750 -18.08997 -17.88485 -17.45355 -17.13494 -17.03324 -16.88878 -16.33321 -16.28520 -16.00794 -15.75065 -15.55463 -15.07462 -14.84550 -14.60858 -14.26459 -14.12083 -14.02566 -13.89909 -13.81800 -13.62714 -13.41124 -13.34687 -13.14283 -13.03814 -13.00904 -12.87282 -12.16938 -12.10931 -12.01590 -11.80376 -11.60063 -11.50052 -11.36857 -11.31722 -11.06351 -10.91241 -10.34369 -10.00720 -9.05326 -4.95067 -0.91998 -0.90711 -0.38610 0.18930 0.94384 1.15480 1.38447 1.63142 1.77265 1.82012 1.88468 1.99131 2.19677 2.60515 2.77674 2.86643 2.94906 3.14039 3.20017 3.36262 3.40801 3.42000 3.51921 3.56826 3.90561 3.93566 4.10342 4.12703 4.24673 4.29527 4.30974 4.43541 4.48836 4.50425 4.55072 4.62101 4.71785 4.86512 4.91577 4.98107 4.99331 5.30809 5.34302 5.56608 6.24878 6.41225 6.47658 6.91652 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.643 4.643 2 S 2.420 3.580 3 O -0.987 6.987 4 O -0.982 6.982 5 C -0.588 4.588 6 H 0.192 0.808 7 C -0.125 4.125 8 C 0.126 3.874 9 H 0.100 0.900 10 N -0.688 5.688 11 C 0.585 3.415 12 O -0.562 6.562 13 C -0.174 4.174 14 C 0.166 3.834 15 N -0.360 5.360 16 C -0.051 4.051 17 C -0.054 4.054 18 O -0.565 6.565 19 Si 0.807 3.193 20 C 0.041 3.959 21 N -0.491 5.491 22 C 0.221 3.779 23 C -0.081 4.081 24 Br 0.008 6.992 25 C -0.025 4.025 26 C -0.120 4.120 27 H 0.154 0.846 28 H 0.128 0.872 29 H 0.150 0.850 30 H 0.112 0.888 31 H 0.107 0.893 32 H 0.418 0.582 33 H 0.187 0.813 34 H 0.110 0.890 35 H 0.406 0.594 36 H -0.272 1.272 37 H -0.308 1.308 38 H 0.230 0.770 39 H 0.190 0.810 40 H 0.112 0.888 41 H 0.105 0.895 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.098 -2.628 2.912 6.432 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.795 4.795 2 S 2.609 3.391 3 O -0.985 6.985 4 O -0.979 6.979 5 C -0.699 4.699 6 H 0.209 0.791 7 C -0.164 4.164 8 C 0.020 3.980 9 H 0.118 0.882 10 N -0.340 5.340 11 C 0.371 3.629 12 O -0.441 6.441 13 C -0.182 4.182 14 C 0.039 3.961 15 N -0.033 5.033 16 C -0.162 4.162 17 C -0.161 4.161 18 O -0.377 6.377 19 Si 0.709 3.291 20 C -0.108 4.108 21 N -0.210 5.210 22 C -0.024 4.024 23 C -0.163 4.163 24 Br 0.093 6.907 25 C -0.051 4.051 26 C -0.158 4.158 27 H 0.172 0.828 28 H 0.147 0.853 29 H 0.169 0.831 30 H 0.130 0.870 31 H 0.126 0.874 32 H 0.258 0.742 33 H 0.204 0.796 34 H 0.128 0.872 35 H 0.259 0.741 36 H -0.198 1.198 37 H -0.236 1.236 38 H 0.246 0.754 39 H 0.207 0.793 40 H 0.131 0.869 41 H 0.124 0.876 Dipole moment (debyes) X Y Z Total from point charges -4.147 -1.609 3.137 5.443 hybrid contribution 0.437 -1.161 -1.147 1.689 sum -3.710 -2.770 1.990 5.039 Atomic orbital electron populations 1.30112 1.22622 1.13674 1.13101 1.07503 0.79764 0.74066 0.77787 1.93557 1.80949 1.36592 1.87371 1.93557 1.80931 1.67655 1.55790 1.31771 1.07122 1.08315 1.22731 0.79098 1.23327 1.00695 0.89992 1.02400 1.21745 0.98125 0.98843 0.79331 0.88154 1.45297 1.66601 1.13844 1.08245 1.17490 0.76979 0.83756 0.84662 1.90854 1.47006 1.31113 1.75164 1.19214 1.10322 0.94031 0.94593 1.22185 0.91935 1.01332 0.80617 1.42723 1.41575 1.11619 1.07387 1.21445 1.13833 0.93014 0.87901 1.24760 0.96506 0.91573 1.03304 1.86433 1.60577 1.37285 1.53367 0.93611 0.82087 0.76141 0.77280 1.22977 0.99480 0.89247 0.99135 1.70843 1.23138 1.17372 1.09632 1.20753 1.03402 0.87704 0.90541 1.20587 1.09344 0.92065 0.94339 1.96840 1.85999 1.23570 1.84279 1.21372 0.93169 0.98083 0.92454 1.23089 0.91673 0.97745 1.03330 0.82779 0.85306 0.83127 0.86987 0.87441 0.74246 0.79583 0.87210 0.74106 1.19783 1.23628 0.75415 0.79343 0.86916 0.87630 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.64 7.29 10.62 113.37 1.20 8.50 16 2 S 2.42 -10.44 5.34 -56.49 -0.30 -10.74 16 3 O -0.99 -4.91 18.10 -127.37 -2.31 -7.22 16 4 O -0.98 -4.45 17.20 -127.37 -2.19 -6.64 16 5 C -0.59 6.53 4.06 31.22 0.13 6.66 16 6 H 0.19 -3.65 8.14 -2.39 -0.02 -3.67 16 7 C -0.12 1.10 7.44 31.22 0.23 1.33 16 8 C 0.13 -0.77 4.30 45.52 0.20 -0.57 16 9 H 0.10 -0.19 7.50 -2.39 -0.02 -0.21 16 10 N -0.69 5.03 5.22 -443.14 -2.31 2.71 16 11 C 0.58 -0.15 7.76 86.71 0.67 0.53 16 12 O -0.56 -4.29 15.89 -4.02 -0.06 -4.35 16 13 C -0.17 0.10 5.84 -20.35 -0.12 -0.01 16 14 C 0.17 0.49 9.91 83.65 0.83 1.32 16 15 N -0.36 -1.69 2.93 -337.71 -0.99 -2.68 16 16 C -0.05 -0.10 6.27 41.01 0.26 0.16 16 17 C -0.05 0.21 3.05 71.24 0.22 0.43 16 18 O -0.56 0.93 10.88 -148.98 -1.62 -0.69 16 19 Si 0.81 -4.71 31.19 68.60 2.14 -2.57 16 20 C 0.04 0.06 10.44 83.68 0.87 0.93 16 21 N -0.49 -3.70 11.30 -194.09 -2.19 -5.90 16 22 C 0.22 1.40 7.59 134.19 1.02 2.42 16 23 C -0.08 -0.16 6.24 22.42 0.14 -0.02 16 24 Br 0.01 0.01 33.72 -20.37 -0.69 -0.68 16 25 C -0.03 0.09 9.26 22.56 0.21 0.30 16 26 C -0.12 0.98 7.41 31.12 0.23 1.21 16 27 H 0.15 -2.48 8.14 -2.39 -0.02 -2.50 16 28 H 0.13 -1.29 8.14 -2.39 -0.02 -1.31 16 29 H 0.15 -2.28 8.14 -2.39 -0.02 -2.30 16 30 H 0.11 -0.78 7.38 -2.39 -0.02 -0.80 16 31 H 0.11 -1.23 8.14 -2.39 -0.02 -1.25 16 32 H 0.42 -5.82 6.74 -92.71 -0.62 -6.44 16 33 H 0.19 0.65 6.19 -2.91 -0.02 0.63 16 34 H 0.11 -0.95 7.96 -2.39 -0.02 -0.97 16 35 H 0.41 -3.98 8.74 -74.06 -0.65 -4.62 16 36 H -0.27 0.73 7.11 99.48 0.71 1.44 16 37 H -0.31 -1.24 7.11 99.48 0.71 -0.53 16 38 H 0.23 -1.71 6.91 -2.91 -0.02 -1.73 16 39 H 0.19 -2.31 6.44 -2.91 -0.02 -2.33 16 40 H 0.11 -1.25 8.14 -2.39 -0.02 -1.27 16 41 H 0.11 -0.70 8.10 -2.39 -0.02 -0.72 16 Total: 0.00 -39.63 380.99 -4.54 -44.17 By element: Atomic # 1 Polarization: -28.50 SS G_CDS: -0.11 Total: -28.60 kcal Atomic # 6 Polarization: 17.10 SS G_CDS: 6.09 Total: 23.18 kcal Atomic # 7 Polarization: -0.37 SS G_CDS: -5.50 Total: -5.87 kcal Atomic # 8 Polarization: -12.73 SS G_CDS: -6.18 Total: -18.91 kcal Atomic # 14 Polarization: -4.71 SS G_CDS: 2.14 Total: -2.57 kcal Atomic # 16 Polarization: -10.44 SS G_CDS: -0.30 Total: -10.74 kcal Atomic # 35 Polarization: 0.01 SS G_CDS: -0.69 Total: -0.68 kcal Total: -39.63 -4.54 -44.17 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_12912156_12335884.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 43.153 kcal (2) G-P(sol) polarization free energy of solvation -39.631 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 3.522 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.544 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -44.175 kcal (6) G-S(sol) free energy of system = (1) + (5) -1.021 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.06 seconds