Wall clock time and date at job start Thu Mar 4 2021 14:03:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46503 * 1 3 3 N 1.28461 * 124.88786 * 2 1 4 4 C 1.31813 * 110.07483 * 180.02562 * 3 2 1 5 5 C 1.47709 * 126.51648 * 180.02562 * 4 3 2 6 6 O 1.21571 * 119.99826 * 179.97438 * 5 4 3 7 7 N 1.34777 * 120.00118 * 359.97389 * 5 4 3 8 8 C 1.46504 * 119.99909 * 179.97438 * 7 5 4 9 9 H 1.08997 * 112.84647 * 23.80583 * 8 7 5 10 10 C 1.53781 * 113.61272 * 155.00047 * 8 7 5 11 11 C 1.53780 * 87.07862 * 89.11937 * 10 8 7 12 12 H 1.09008 * 113.61503 * 270.79660 * 11 10 8 13 13 S 1.81396 * 113.61518 * 139.98356 * 11 10 8 14 14 C 1.81404 * 101.92212 * 184.99965 * 13 11 10 15 15 O 1.42107 * 108.57464 * 299.48497 * 13 11 10 16 16 O 1.42099 * 108.58193 * 70.50892 * 13 11 10 17 17 C 1.53776 * 113.61381 * 252.50077 * 8 7 5 18 18 C 1.41499 * 106.96132 * 359.77198 * 4 3 2 19 19 C 1.35033 * 124.88130 * 180.02562 * 2 1 3 20 20 C 1.50707 * 126.38941 * 359.95678 * 19 2 1 21 21 O 1.42903 * 109.46442 * 30.00179 * 20 19 2 22 22 Si 1.86293 * 109.47256 * 149.99745 * 20 19 2 23 23 H 1.08993 * 109.47341 * 269.97412 * 1 2 3 24 24 H 1.09005 * 109.46988 * 29.97809 * 1 2 3 25 25 H 1.09005 * 109.47269 * 149.97167 * 1 2 3 26 26 H 0.96998 * 120.00390 * 0.02562 * 7 5 4 27 27 H 1.08993 * 113.61380 * 203.66745 * 10 8 7 28 28 H 1.09000 * 113.61493 * 334.49216 * 10 8 7 29 29 H 1.08991 * 109.47155 * 59.99659 * 14 13 11 30 30 H 1.09004 * 109.47099 * 179.97438 * 14 13 11 31 31 H 1.09004 * 109.47069 * 299.99439 * 14 13 11 32 32 H 1.09002 * 113.61830 * 25.43115 * 17 8 7 33 33 H 1.09006 * 113.61409 * 156.33615 * 17 8 7 34 34 H 1.08002 * 127.25017 * 180.24765 * 18 4 3 35 35 H 1.08999 * 109.47345 * 270.00249 * 20 19 2 36 36 H 0.96700 * 114.00311 * 60.00230 * 21 20 19 37 37 H 1.48501 * 109.99918 * 58.68485 * 22 20 19 38 38 H 1.48506 * 109.99973 * 180.02562 * 22 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 7 2.1998 1.0537 0.0000 4 6 3.4741 0.7167 -0.0006 5 6 4.6274 1.6397 -0.0002 6 8 5.7598 1.1974 -0.0003 7 7 4.4242 2.9720 0.0002 8 6 5.5681 3.8874 0.0011 9 1 6.4729 3.4345 -0.4041 10 6 5.2514 5.2696 -0.5939 11 6 4.8391 5.6985 0.8241 12 1 3.7884 5.5139 1.0480 13 16 5.3669 7.3791 1.2573 14 6 4.8667 7.4921 2.9973 15 8 6.7850 7.4399 1.1890 16 8 4.5956 8.3043 0.5034 17 6 5.7837 4.6026 1.3453 18 6 3.5272 -0.6973 0.0045 19 6 2.2373 -1.1077 -0.0005 20 6 1.7533 -2.5350 -0.0002 21 8 0.4950 -2.6113 -0.6732 22 14 2.9939 -3.6115 -0.8793 23 1 -0.3633 -0.0005 1.0276 24 1 -0.3633 0.8902 -0.5135 25 1 -0.3634 -0.8898 -0.5143 26 1 3.5207 3.3249 0.0007 27 1 6.1293 5.7942 -0.9709 28 1 4.4260 5.2598 -1.3058 29 1 5.3785 6.7213 3.5733 30 1 5.1323 8.4742 3.3887 31 1 3.7889 7.3488 3.0756 32 1 5.3871 4.0546 2.2001 33 1 6.8072 4.9449 1.4986 34 1 4.4108 -1.3183 0.0092 35 1 1.6373 -2.8791 1.0275 36 1 0.5234 -2.3198 -1.5947 37 1 4.3151 -3.5161 -0.2080 38 1 2.5280 -5.0216 -0.8864 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_22_12912156_13259642.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 14:03:37 Heat of formation + Delta-G solvation = -10.947697 kcal Electronic energy + Delta-G solvation = -24275.563646 eV Core-core repulsion = 20443.832528 eV Total energy + Delta-G solvation = -3831.731118 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 316.097 amu Computer time = 1.38 seconds Orbital eigenvalues (eV) -43.89201 -41.19612 -39.22726 -38.32767 -37.96197 -37.02312 -34.66315 -34.20479 -32.62385 -30.68500 -28.88085 -27.27977 -27.07819 -26.54973 -24.31021 -22.29612 -21.24593 -21.06364 -19.75421 -19.30574 -18.32209 -17.62153 -17.46583 -17.33289 -17.20277 -17.04996 -16.88058 -16.17488 -15.85583 -15.79419 -15.66534 -15.16761 -14.80288 -14.50500 -14.27359 -14.12569 -14.05314 -13.98859 -13.81795 -13.69775 -13.63849 -13.09077 -12.98050 -12.68776 -12.44777 -12.24227 -12.15170 -11.95370 -11.84229 -11.23737 -11.15427 -11.02720 -10.32068 -10.11222 -10.01719 -5.14253 -1.05844 0.45375 0.75262 1.05963 1.41340 1.56954 1.64415 1.84969 1.99369 2.34069 2.45977 2.72966 2.88274 3.04173 3.21044 3.23669 3.25813 3.46264 3.63237 3.76516 3.87270 3.92696 4.02953 4.13447 4.21118 4.31997 4.35395 4.38448 4.44762 4.47213 4.58396 4.60538 4.63873 4.66544 4.82289 5.22443 5.39010 5.55715 6.07212 6.34763 6.78565 7.14616 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.069 3.931 2 N -0.261 5.261 3 N -0.257 5.257 4 C -0.018 4.018 5 C 0.611 3.389 6 O -0.523 6.523 7 N -0.703 5.703 8 C 0.134 3.866 9 H 0.118 0.882 10 C -0.114 4.114 11 C -0.610 4.610 12 H 0.151 0.849 13 S 2.426 3.574 14 C -0.655 4.655 15 O -0.933 6.933 16 O -0.938 6.938 17 C -0.127 4.127 18 C -0.175 4.175 19 C -0.018 4.018 20 C -0.043 4.043 21 O -0.539 6.539 22 Si 0.719 3.281 23 H 0.083 0.917 24 H 0.094 0.906 25 H 0.122 0.878 26 H 0.408 0.592 27 H 0.111 0.889 28 H 0.096 0.904 29 H 0.129 0.871 30 H 0.130 0.870 31 H 0.127 0.873 32 H 0.090 0.910 33 H 0.116 0.884 34 H 0.167 0.833 35 H 0.125 0.875 36 H 0.383 0.617 37 H -0.249 1.249 38 H -0.248 1.248 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.595 -2.859 -0.291 6.290 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 N -0.050 5.050 3 N -0.094 5.094 4 C -0.177 4.177 5 C 0.396 3.604 6 O -0.397 6.397 7 N -0.355 5.355 8 C 0.027 3.973 9 H 0.136 0.864 10 C -0.152 4.152 11 C -0.719 4.719 12 H 0.169 0.831 13 S 2.608 3.392 14 C -0.804 4.804 15 O -0.930 6.930 16 O -0.935 6.935 17 C -0.166 4.166 18 C -0.203 4.203 19 C -0.143 4.143 20 C -0.154 4.154 21 O -0.345 6.345 22 Si 0.617 3.383 23 H 0.102 0.898 24 H 0.113 0.887 25 H 0.139 0.861 26 H 0.244 0.756 27 H 0.130 0.870 28 H 0.114 0.886 29 H 0.148 0.852 30 H 0.148 0.852 31 H 0.146 0.854 32 H 0.109 0.891 33 H 0.135 0.865 34 H 0.184 0.816 35 H 0.142 0.858 36 H 0.231 0.769 37 H -0.173 1.173 38 H -0.172 1.172 Dipole moment (debyes) X Y Z Total from point charges -4.852 -2.514 -0.165 5.467 hybrid contribution -0.932 -0.534 1.342 1.720 sum -5.784 -3.048 1.178 6.644 Atomic orbital electron populations 1.22667 0.72353 1.06804 1.05223 1.45371 1.08015 1.02045 1.49535 1.73497 1.02834 1.14174 1.18902 1.21696 0.90676 0.93813 1.11504 1.16838 0.86687 0.81184 0.75677 1.90837 1.22498 1.76956 1.49374 1.45467 1.09829 1.05100 1.75089 1.21693 0.90769 0.88931 0.95909 0.86374 1.23014 1.03625 0.96108 0.92501 1.31801 1.10670 1.21673 1.07769 0.83089 1.07751 0.75933 0.77286 0.78236 1.30232 1.12734 1.11960 1.25485 1.93618 1.27636 1.85743 1.86046 1.93612 1.72603 1.59005 1.68316 1.23262 0.99397 0.94548 0.99435 1.21536 0.96483 0.93855 1.08404 1.21920 0.91243 0.91498 1.09589 1.24877 0.94049 0.93583 1.02864 1.86475 1.29963 1.88680 1.29385 0.94038 0.76533 0.78049 0.89663 0.89809 0.88725 0.86056 0.75612 0.87025 0.88561 0.85221 0.85188 0.85385 0.89091 0.86536 0.81581 0.85757 0.76871 1.17260 1.17226 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 30. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.07 -0.25 11.00 59.85 0.66 0.40 16 2 N -0.26 0.13 3.70 -63.85 -0.24 -0.10 16 3 N -0.26 -0.29 11.67 33.42 0.39 0.10 16 4 C -0.02 -0.04 7.13 -82.76 -0.59 -0.63 16 5 C 0.61 1.66 7.82 -12.39 -0.10 1.56 16 6 O -0.52 -3.03 16.52 5.30 0.09 -2.94 16 7 N -0.70 0.17 5.26 -54.00 -0.28 -0.11 16 8 C 0.13 -0.13 4.32 -67.12 -0.29 -0.42 16 9 H 0.12 0.02 7.46 -51.93 -0.39 -0.37 16 10 C -0.11 0.26 7.42 -25.92 -0.19 0.07 16 11 C -0.61 1.98 4.04 -25.92 -0.10 1.87 16 12 H 0.15 -0.84 8.14 -51.92 -0.42 -1.26 16 13 S 2.43 -3.02 5.30 -107.50 -0.57 -3.59 16 14 C -0.65 2.51 10.62 101.05 1.07 3.59 16 15 O -0.93 -2.19 17.34 -57.83 -1.00 -3.19 16 16 O -0.94 -2.75 18.10 -57.83 -1.05 -3.80 16 17 C -0.13 0.30 7.42 -25.92 -0.19 0.11 16 18 C -0.17 -0.22 9.35 -39.36 -0.37 -0.59 16 19 C -0.02 0.01 6.17 -82.21 -0.51 -0.50 16 20 C -0.04 0.11 2.99 36.01 0.11 0.21 16 21 O -0.54 1.89 10.02 -35.23 -0.35 1.53 16 22 Si 0.72 -1.89 31.38 -169.99 -5.33 -7.22 16 23 H 0.08 -0.32 8.14 -51.93 -0.42 -0.75 16 24 H 0.09 -0.44 8.14 -51.93 -0.42 -0.86 16 25 H 0.12 -0.62 5.00 -51.93 -0.26 -0.88 16 26 H 0.41 -0.76 8.43 -40.82 -0.34 -1.11 16 27 H 0.11 -0.29 8.10 -51.93 -0.42 -0.71 16 28 H 0.10 -0.29 8.14 -51.93 -0.42 -0.72 16 29 H 0.13 -0.68 8.14 -51.93 -0.42 -1.11 16 30 H 0.13 -0.49 8.14 -51.92 -0.42 -0.91 16 31 H 0.13 -0.70 8.14 -51.92 -0.42 -1.12 16 32 H 0.09 -0.26 8.14 -51.93 -0.42 -0.68 16 33 H 0.12 -0.30 7.48 -51.93 -0.39 -0.69 16 34 H 0.17 0.16 6.85 -52.49 -0.36 -0.20 16 35 H 0.13 -0.29 7.96 -51.93 -0.41 -0.70 16 36 H 0.38 -2.68 8.39 45.56 0.38 -2.30 16 37 H -0.25 -0.02 6.83 56.52 0.39 0.36 16 38 H -0.25 -0.03 7.11 56.52 0.40 0.38 16 LS Contribution 336.33 15.07 5.07 5.07 Total: 0.00 -13.62 336.33 -8.57 -22.19 By element: Atomic # 1 Polarization: -8.83 SS G_CDS: -4.79 Total: -13.62 kcal Atomic # 6 Polarization: 6.18 SS G_CDS: -0.50 Total: 5.68 kcal Atomic # 7 Polarization: 0.02 SS G_CDS: -0.13 Total: -0.11 kcal Atomic # 8 Polarization: -6.09 SS G_CDS: -2.31 Total: -8.40 kcal Atomic # 14 Polarization: -1.89 SS G_CDS: -5.33 Total: -7.22 kcal Atomic # 16 Polarization: -3.02 SS G_CDS: -0.57 Total: -3.59 kcal Total LS contribution 5.07 Total: 5.07 kcal Total: -13.62 -8.57 -22.19 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_12912156_13259642.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 11.243 kcal (2) G-P(sol) polarization free energy of solvation -13.622 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -2.379 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.569 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.191 kcal (6) G-S(sol) free energy of system = (1) + (5) -10.948 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.38 seconds