Wall clock time and date at job start Thu Mar 4 2021 14:08:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46499 * 1 3 3 N 1.28470 * 124.88792 * 2 1 4 4 C 1.31805 * 110.07449 * 179.97438 * 3 2 1 5 5 C 1.47713 * 126.51608 * 180.02562 * 4 3 2 6 6 O 1.21570 * 119.99697 * 180.02562 * 5 4 3 7 7 N 1.34771 * 120.00163 * 0.02562 * 5 4 3 8 8 C 1.46502 * 120.00028 * 180.02562 * 7 5 4 9 9 C 1.53001 * 109.47138 * 176.15978 * 8 7 5 10 10 C 1.50700 * 112.85513 * 73.45882 * 9 8 7 11 11 C 1.38230 * 120.00032 * 246.01131 * 10 9 8 12 12 C 1.38240 * 119.99789 * 179.78722 * 11 10 9 13 13 C 1.38237 * 119.99847 * 0.44161 * 12 11 10 14 14 C 1.38229 * 119.99840 * 359.81313 * 13 12 11 15 15 C 1.38233 * 120.00408 * 359.97382 * 14 13 12 16 16 C 1.53784 * 113.60964 * 302.26317 * 9 8 7 17 17 C 1.53777 * 87.08115 * 270.88354 * 16 9 8 18 18 H 1.08998 * 113.61712 * 219.93015 * 17 16 9 19 19 O 1.42905 * 113.61028 * 89.12009 * 17 16 9 20 20 C 1.53781 * 113.61236 * 204.76854 * 9 8 7 21 21 C 1.41497 * 106.96407 * 359.74236 * 4 3 2 22 22 C 1.35037 * 124.88363 * 179.97438 * 2 1 3 23 23 C 1.50694 * 126.38495 * 0.02562 * 22 2 1 24 24 O 1.42900 * 109.46957 * 30.00868 * 23 22 2 25 25 Si 1.86308 * 109.47015 * 150.00399 * 23 22 2 26 26 H 1.09003 * 109.46965 * 270.02940 * 1 2 3 27 27 H 1.08999 * 109.46768 * 30.02156 * 1 2 3 28 28 H 1.08990 * 109.47271 * 150.02412 * 1 2 3 29 29 H 0.97008 * 120.00177 * 0.02562 * 7 5 4 30 30 H 1.09005 * 109.46793 * 296.15077 * 8 7 5 31 31 H 1.08990 * 109.47220 * 56.15365 * 8 7 5 32 32 H 1.08000 * 120.00275 * 0.02562 * 11 10 9 33 33 H 1.08002 * 120.00319 * 180.27650 * 12 11 10 34 34 H 1.08001 * 119.99909 * 179.83893 * 13 12 11 35 35 H 1.08007 * 119.99796 * 179.97438 * 14 13 12 36 36 H 1.07997 * 120.00109 * 180.02562 * 15 14 13 37 37 H 1.08999 * 113.61482 * 25.43697 * 16 9 8 38 38 H 1.09004 * 113.61380 * 156.33569 * 16 9 8 39 39 H 0.96699 * 113.99521 * 180.02562 * 19 17 16 40 40 H 1.09002 * 113.61227 * 203.65699 * 20 9 8 41 41 H 1.08994 * 113.61700 * 334.56816 * 20 9 8 42 42 H 1.07999 * 127.25181 * 180.27280 * 21 4 3 43 43 H 1.08997 * 109.47656 * 270.00380 * 23 22 2 44 44 H 0.96699 * 114.00369 * 59.99646 * 24 23 22 45 45 H 1.48499 * 109.99865 * 180.02562 * 25 23 22 46 46 H 1.48503 * 109.99791 * 301.32111 * 25 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 7 2.1998 1.0538 0.0000 4 6 3.4740 0.7168 0.0006 5 6 4.6273 1.6398 0.0013 6 8 5.7597 1.1975 0.0013 7 7 4.4242 2.9721 0.0019 8 6 5.5680 3.8875 0.0021 9 6 5.0669 5.3299 -0.0938 10 6 4.4466 5.8205 1.1891 11 6 3.0969 6.1151 1.2357 12 6 2.5271 6.5610 2.4136 13 6 3.3089 6.7208 3.5424 14 6 4.6596 6.4312 3.4943 15 6 5.2286 5.9812 2.3176 16 6 4.2047 5.6010 -1.3380 17 6 5.5111 5.9499 -2.0704 18 1 5.4214 6.8056 -2.7396 19 8 6.1383 4.8249 -2.6893 20 6 6.0974 6.3015 -0.6929 21 6 3.5271 -0.6971 0.0070 22 6 2.2373 -1.1077 0.0005 23 6 1.7534 -2.5349 0.0006 24 8 0.4958 -2.6114 -0.6737 25 14 2.9949 -3.6117 -0.8769 26 1 -0.3633 0.0005 1.0277 27 1 -0.3633 0.8898 -0.5142 28 1 -0.3633 -0.8901 -0.5134 29 1 3.5206 3.3250 0.0023 30 1 6.1349 3.7604 0.9244 31 1 6.2091 3.6680 -0.8516 32 1 2.4867 5.9934 0.3529 33 1 1.4716 6.7869 2.4513 34 1 2.8642 7.0716 4.4620 35 1 5.2705 6.5565 4.3761 36 1 6.2838 5.7545 2.2802 37 1 3.7094 4.7119 -1.7282 38 1 3.5282 6.4482 -1.2243 39 1 6.9607 5.0380 -3.1513 40 1 5.9383 7.3401 -0.4029 41 1 7.1300 5.9778 -0.5624 42 1 4.4107 -1.3181 0.0133 43 1 1.6362 -2.8788 1.0282 44 1 0.5252 -2.3201 -1.5953 45 1 2.5290 -5.0216 -0.8842 46 1 3.1873 -3.1335 -2.2696 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_13154426_13259642.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 14:08:21 Heat of formation + Delta-G solvation = 28.788910 kcal Electronic energy + Delta-G solvation = -30448.284909 eV Core-core repulsion = 26307.590805 eV Total energy + Delta-G solvation = -4140.694104 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 344.157 amu Computer time = 1.09 seconds Orbital eigenvalues (eV) -43.85722 -41.87486 -40.20727 -39.27007 -38.25542 -36.41261 -35.04997 -34.37129 -32.66273 -31.92095 -31.71911 -29.40243 -28.05357 -26.99065 -26.61025 -24.95880 -23.77562 -23.19129 -22.32755 -22.21274 -21.01455 -19.97174 -19.09526 -18.61387 -17.71775 -17.62273 -17.55507 -17.25291 -16.89814 -16.50528 -16.10374 -15.98941 -15.78240 -15.77353 -15.61123 -15.22708 -14.97011 -14.75055 -14.41792 -14.20158 -14.13505 -14.06753 -13.72673 -13.48643 -13.41007 -13.19600 -13.05834 -12.72426 -12.63884 -12.25976 -12.22498 -12.00574 -11.89310 -11.61130 -11.39513 -11.18532 -11.02274 -10.72008 -10.30174 -9.98738 -9.97067 -9.82551 -9.61518 -4.89054 0.41651 0.43740 0.48813 0.81060 1.20898 1.54448 1.67673 1.93311 2.10180 2.30271 2.83052 3.02024 3.16581 3.29432 3.33293 3.38431 3.52607 3.73142 3.76797 3.90676 4.07691 4.12842 4.14648 4.26985 4.29845 4.33213 4.42168 4.43929 4.49135 4.54034 4.62747 4.64490 4.68445 4.71537 4.73824 4.83222 4.86617 4.99685 5.07858 5.14152 5.18280 5.20469 5.23486 5.34564 5.58410 5.62988 5.66649 5.67362 6.10008 6.23502 6.36177 6.79934 6.89357 7.09990 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.064 3.936 2 N -0.263 5.263 3 N -0.267 5.267 4 C -0.041 4.041 5 C 0.601 3.399 6 O -0.567 6.567 7 N -0.700 5.700 8 C 0.148 3.852 9 C -0.046 4.046 10 C -0.073 4.073 11 C -0.124 4.124 12 C -0.126 4.126 13 C -0.135 4.135 14 C -0.129 4.129 15 C -0.125 4.125 16 C -0.127 4.127 17 C 0.081 3.919 18 H 0.088 0.912 19 O -0.567 6.567 20 C -0.143 4.143 21 C -0.187 4.187 22 C -0.013 4.013 23 C -0.044 4.044 24 O -0.535 6.535 25 Si 0.783 3.217 26 H 0.093 0.907 27 H 0.102 0.898 28 H 0.132 0.868 29 H 0.410 0.590 30 H 0.057 0.943 31 H 0.084 0.916 32 H 0.136 0.864 33 H 0.136 0.864 34 H 0.133 0.867 35 H 0.132 0.868 36 H 0.124 0.876 37 H 0.068 0.932 38 H 0.116 0.884 39 H 0.396 0.604 40 H 0.104 0.896 41 H 0.081 0.919 42 H 0.182 0.818 43 H 0.146 0.854 44 H 0.390 0.610 45 H -0.281 1.281 46 H -0.294 1.294 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.245 2.424 -0.269 4.060 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.075 4.075 2 N -0.053 5.053 3 N -0.105 5.105 4 C -0.199 4.199 5 C 0.386 3.614 6 O -0.444 6.444 7 N -0.350 5.350 8 C 0.025 3.975 9 C -0.047 4.047 10 C -0.073 4.073 11 C -0.142 4.142 12 C -0.144 4.144 13 C -0.152 4.152 14 C -0.147 4.147 15 C -0.143 4.143 16 C -0.165 4.165 17 C 0.022 3.978 18 H 0.106 0.894 19 O -0.376 6.376 20 C -0.181 4.181 21 C -0.215 4.215 22 C -0.138 4.138 23 C -0.154 4.154 24 O -0.343 6.343 25 Si 0.686 3.314 26 H 0.111 0.889 27 H 0.121 0.879 28 H 0.149 0.851 29 H 0.246 0.754 30 H 0.075 0.925 31 H 0.102 0.898 32 H 0.153 0.847 33 H 0.154 0.846 34 H 0.151 0.849 35 H 0.150 0.850 36 H 0.142 0.858 37 H 0.087 0.913 38 H 0.134 0.866 39 H 0.247 0.753 40 H 0.122 0.878 41 H 0.100 0.900 42 H 0.199 0.801 43 H 0.163 0.837 44 H 0.240 0.760 45 H -0.207 1.207 46 H -0.220 1.220 Dipole moment (debyes) X Y Z Total from point charges -3.840 2.005 -0.112 4.333 hybrid contribution -0.220 0.401 -0.635 0.782 sum -4.060 2.406 -0.747 4.778 Atomic orbital electron populations 1.22891 0.70800 1.07662 1.06106 1.45711 1.08956 1.01854 1.48753 1.73464 1.02755 1.14887 1.19381 1.21805 0.90844 0.94590 1.12638 1.17056 0.86513 0.81991 0.75842 1.90771 1.23801 1.77729 1.52143 1.45653 1.11052 1.04788 1.73542 1.21211 0.87881 0.86185 1.02208 1.20813 0.98423 0.93644 0.91784 1.19675 0.93946 0.99251 0.94382 1.21265 0.94396 0.99750 0.98776 1.21424 1.00728 0.99238 0.92976 1.21440 0.94259 1.00281 0.99267 1.21393 0.95726 0.99215 0.98331 1.21140 1.00296 0.99970 0.92849 1.23280 0.96324 1.03144 0.93717 1.22692 0.93625 0.88885 0.92644 0.89432 1.86478 1.43517 1.34620 1.72962 1.23656 0.98786 0.99508 0.96166 1.21713 0.97531 0.93356 1.08851 1.22155 0.90894 0.92162 1.08628 1.24869 0.93318 0.91963 1.05209 1.86551 1.29507 1.88171 1.30096 0.93149 0.83957 0.74823 0.79519 0.88866 0.87947 0.85059 0.75445 0.92479 0.89753 0.84672 0.84612 0.84920 0.85033 0.85800 0.91282 0.86574 0.75321 0.87763 0.90039 0.80081 0.83689 0.75960 1.20705 1.22043 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.32 11.00 127.77 1.41 1.08 16 2 N -0.26 -0.61 3.70 -355.94 -1.32 -1.93 16 3 N -0.27 -1.87 11.67 -48.18 -0.56 -2.43 16 4 C -0.04 -0.39 7.13 42.46 0.30 -0.09 16 5 C 0.60 7.50 7.82 86.75 0.68 8.17 16 6 O -0.57 -10.40 16.93 -3.94 -0.07 -10.47 16 7 N -0.70 -5.22 5.07 -466.11 -2.36 -7.58 16 8 C 0.15 0.84 4.86 86.38 0.42 1.26 16 9 C -0.05 -0.01 0.65 -52.40 -0.03 -0.05 16 10 C -0.07 -0.12 4.85 -19.87 -0.10 -0.22 16 11 C -0.12 -0.09 9.05 22.27 0.20 0.11 16 12 C -0.13 -0.12 10.05 22.27 0.22 0.11 16 13 C -0.13 -0.22 10.05 22.27 0.22 0.00 16 14 C -0.13 -0.30 10.05 22.27 0.22 -0.08 16 15 C -0.12 -0.34 9.23 22.27 0.21 -0.13 16 16 C -0.13 0.16 5.87 31.12 0.18 0.35 16 17 C 0.08 -0.19 5.28 31.12 0.16 -0.02 16 18 H 0.09 -0.48 8.14 -2.39 -0.02 -0.50 16 19 O -0.57 -0.45 11.58 -148.98 -1.73 -2.18 16 20 C -0.14 0.37 6.92 31.12 0.22 0.59 16 21 C -0.19 -1.03 9.35 22.41 0.21 -0.82 16 22 C -0.01 -0.02 6.17 41.40 0.26 0.24 16 23 C -0.04 0.16 2.99 71.23 0.21 0.37 16 24 O -0.54 2.26 10.02 -148.98 -1.49 0.76 16 25 Si 0.78 -2.22 31.25 68.60 2.14 -0.08 16 26 H 0.09 -0.58 8.14 -2.39 -0.02 -0.60 16 27 H 0.10 -0.69 8.14 -2.39 -0.02 -0.71 16 28 H 0.13 -1.06 5.00 -2.39 -0.01 -1.07 16 29 H 0.41 2.12 7.62 -92.70 -0.71 1.41 16 30 H 0.06 0.44 7.80 -2.38 -0.02 0.42 16 31 H 0.08 0.72 6.06 -2.39 -0.01 0.70 16 32 H 0.14 -0.35 6.42 -2.91 -0.02 -0.37 16 33 H 0.14 -0.36 8.06 -2.91 -0.02 -0.39 16 34 H 0.13 -0.21 8.06 -2.91 -0.02 -0.24 16 35 H 0.13 -0.08 8.06 -2.91 -0.02 -0.10 16 36 H 0.12 0.15 8.06 -2.91 -0.02 0.13 16 37 H 0.07 0.12 7.35 -2.39 -0.02 0.10 16 38 H 0.12 -0.52 6.81 -2.38 -0.02 -0.53 16 39 H 0.40 -2.72 9.12 -74.06 -0.68 -3.40 16 40 H 0.10 -0.41 8.10 -2.39 -0.02 -0.43 16 41 H 0.08 -0.20 8.10 -2.39 -0.02 -0.22 16 42 H 0.18 0.37 7.04 -2.91 -0.02 0.35 16 43 H 0.15 -0.92 7.96 -2.39 -0.02 -0.94 16 44 H 0.39 -3.47 8.39 -74.06 -0.62 -4.09 16 45 H -0.28 -0.70 7.11 99.48 0.71 0.01 16 46 H -0.29 -1.09 7.11 99.48 0.71 -0.38 16 Total: 0.00 -22.58 378.17 -1.31 -23.88 By element: Atomic # 1 Polarization: -9.93 SS G_CDS: -0.92 Total: -10.84 kcal Atomic # 6 Polarization: 5.87 SS G_CDS: 5.00 Total: 10.87 kcal Atomic # 7 Polarization: -7.70 SS G_CDS: -4.24 Total: -11.94 kcal Atomic # 8 Polarization: -8.60 SS G_CDS: -3.28 Total: -11.88 kcal Atomic # 14 Polarization: -2.22 SS G_CDS: 2.14 Total: -0.08 kcal Total: -22.58 -1.31 -23.88 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_13154426_13259642.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 52.671 kcal (2) G-P(sol) polarization free energy of solvation -22.576 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 30.094 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.305 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.882 kcal (6) G-S(sol) free energy of system = (1) + (5) 28.789 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.09 seconds