Wall clock time and date at job start Thu Mar 4 2021 14:47:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86298 * 109.46997 * 2 1 4 4 C 1.50699 * 109.46830 * 240.00466 * 2 1 3 5 5 C 1.35003 * 126.43002 * 150.02050 * 4 2 1 6 6 N 1.33585 * 108.66015 * 179.97438 * 5 4 2 7 7 C 1.32421 * 109.22071 * 0.02562 * 6 5 4 8 8 C 1.41245 * 132.11555 * 180.02562 * 7 6 5 9 9 Br 1.89106 * 120.25554 * 359.97094 * 8 7 6 10 10 C 1.35711 * 119.49059 * 179.97438 * 8 7 6 11 11 C 1.41766 * 119.52793 * 359.97438 * 10 8 7 12 12 C 1.47575 * 120.00521 * 179.97438 * 11 10 8 13 13 O 1.21589 * 119.99506 * 179.97438 * 12 11 10 14 14 N 1.34769 * 120.00250 * 0.02562 * 12 11 10 15 15 C 1.46496 * 120.00279 * 179.97438 * 14 12 11 16 16 H 1.09000 * 112.85130 * 336.19700 * 15 14 12 17 17 C 1.53780 * 113.61564 * 107.49915 * 15 14 12 18 18 C 1.53780 * 87.08386 * 89.11886 * 17 15 14 19 19 H 1.08997 * 113.61404 * 270.88899 * 18 17 15 20 20 C 1.52998 * 113.61453 * 139.98170 * 18 17 15 21 21 O 1.42896 * 109.47029 * 87.50781 * 20 18 17 22 22 C 1.53776 * 113.61996 * 204.99557 * 15 14 12 23 23 C 1.36494 * 119.98106 * 0.02562 * 11 10 8 24 24 N 1.35945 * 120.50933 * 359.74771 * 23 11 10 25 25 H 0.96708 * 114.00246 * 59.99398 * 1 2 3 26 26 H 1.08991 * 109.47274 * 120.00272 * 2 1 3 27 27 H 1.48506 * 109.99834 * 60.00805 * 3 2 1 28 28 H 1.48502 * 110.00011 * 181.32069 * 3 2 1 29 29 H 1.08004 * 125.67040 * 359.94384 * 5 4 2 30 30 H 1.07993 * 120.23318 * 180.02562 * 10 8 7 31 31 H 0.97008 * 120.00277 * 359.97438 * 14 12 11 32 32 H 1.09000 * 113.61782 * 203.66819 * 17 15 14 33 33 H 1.09003 * 113.61551 * 334.57294 * 17 15 14 34 34 H 1.09010 * 109.46805 * 207.50436 * 20 18 17 35 35 H 1.08994 * 109.47558 * 327.50282 * 20 18 17 36 36 H 0.96704 * 113.99777 * 179.97438 * 21 20 18 37 37 H 1.09010 * 113.60952 * 25.43251 * 22 15 14 38 38 H 1.09001 * 113.61903 * 156.33236 * 22 15 14 39 39 H 1.08002 * 119.74189 * 180.02562 * 23 11 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7103 -1.2305 5 6 3.0855 -0.4614 -1.8849 6 7 3.1768 -1.2966 -2.9234 7 6 2.1068 -2.0762 -2.9512 8 6 1.7126 -3.1129 -3.8258 9 35 2.8135 -3.5992 -5.2844 10 6 0.5377 -3.7574 -3.6113 11 6 -0.2755 -3.3806 -2.5128 12 6 -1.5554 -4.0738 -2.2701 13 8 -2.2525 -3.7509 -1.3276 14 7 -1.9512 -5.0656 -3.0923 15 6 -3.2215 -5.7542 -2.8510 16 1 -3.5461 -5.6919 -1.8123 17 6 -4.3203 -5.3927 -3.8643 18 6 -3.7953 -6.5514 -4.7283 19 1 -3.0069 -6.2571 -5.4210 20 6 -4.9028 -7.3672 -5.3982 21 8 -5.2434 -6.7696 -6.6507 22 6 -3.2690 -7.1792 -3.4269 23 6 0.1254 -2.3758 -1.6805 24 7 1.3044 -1.7331 -1.8923 25 1 -0.3934 0.4418 -0.7650 26 1 1.7923 -0.5138 0.8899 27 1 1.5616 2.4678 1.2086 28 1 3.5346 1.7703 -0.0322 29 1 3.8139 0.2888 -1.6141 30 1 0.2248 -4.5520 -4.2722 31 1 -1.3949 -5.3235 -3.8440 32 1 -5.3309 -5.5518 -3.4880 33 1 -4.1873 -4.4122 -4.3215 34 1 -4.5533 -8.3862 -5.5649 35 1 -5.7814 -7.3854 -4.7534 36 1 -5.9407 -7.2356 -7.1321 37 1 -2.2870 -7.6410 -3.5308 38 1 -3.9920 -7.8268 -2.9309 39 1 -0.4969 -2.0922 -0.8446 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_13270474_12335884.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 14:47:32 Heat of formation + Delta-G solvation = 12.498320 kcal Electronic energy + Delta-G solvation = -26460.144741 eV Core-core repulsion = 22418.227599 eV Total energy + Delta-G solvation = -4041.917142 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 382.036 amu Computer time = 0.90 seconds Orbital eigenvalues (eV) -44.30066 -41.58223 -39.92406 -38.45994 -38.00167 -37.23629 -35.43887 -34.51087 -32.51826 -31.81870 -30.28927 -28.87245 -26.91598 -26.69038 -25.78553 -24.12038 -23.42197 -22.62756 -22.10266 -20.35385 -19.57694 -18.72300 -18.25772 -18.15981 -17.75263 -17.51664 -17.10964 -16.39430 -16.23087 -16.10658 -15.90163 -15.74740 -15.66635 -15.43107 -15.09586 -14.72137 -14.59096 -14.06947 -13.60750 -13.43414 -13.41007 -13.36823 -13.10607 -13.00141 -12.70107 -12.15581 -11.81596 -11.64661 -11.56268 -11.39417 -11.38872 -11.36777 -11.28509 -10.90758 -10.76208 -10.27250 -10.03495 -9.11767 -4.95688 -0.93166 -0.40885 0.17068 0.94667 1.08564 1.38989 1.65157 1.75925 1.88189 1.99353 2.19387 2.77436 3.04456 3.15374 3.25130 3.33417 3.42554 3.45413 3.48872 3.70159 3.80842 3.84334 4.08520 4.14432 4.22632 4.31724 4.38730 4.43873 4.47057 4.58813 4.66203 4.73498 4.79154 4.84485 4.93273 5.05166 5.12274 5.15871 5.24021 5.52584 5.55006 6.27231 6.40318 6.48934 6.90992 6.93656 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.553 6.553 2 C -0.044 4.044 3 Si 0.805 3.195 4 C -0.080 4.080 5 C 0.035 3.965 6 N -0.493 5.493 7 C 0.227 3.773 8 C -0.080 4.080 9 Br 0.005 6.995 10 C -0.024 4.024 11 C -0.169 4.169 12 C 0.581 3.419 13 O -0.563 6.563 14 N -0.690 5.690 15 C 0.113 3.887 16 H 0.095 0.905 17 C -0.145 4.145 18 C -0.112 4.112 19 H 0.095 0.905 20 C 0.079 3.921 21 O -0.599 6.599 22 C -0.123 4.123 23 C 0.162 3.838 24 N -0.356 5.356 25 H 0.396 0.604 26 H 0.120 0.880 27 H -0.287 1.287 28 H -0.266 1.266 29 H 0.209 0.791 30 H 0.183 0.817 31 H 0.414 0.586 32 H 0.096 0.904 33 H 0.059 0.941 34 H 0.058 0.942 35 H 0.055 0.945 36 H 0.395 0.605 37 H 0.091 0.909 38 H 0.112 0.888 39 H 0.195 0.805 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.200 -2.465 -2.169 4.585 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.361 6.361 2 C -0.153 4.153 3 Si 0.706 3.294 4 C -0.191 4.191 5 C -0.114 4.114 6 N -0.212 5.212 7 C -0.019 4.019 8 C -0.162 4.162 9 Br 0.091 6.909 10 C -0.050 4.050 11 C -0.176 4.176 12 C 0.368 3.632 13 O -0.443 6.443 14 N -0.342 5.342 15 C 0.008 3.992 16 H 0.113 0.887 17 C -0.183 4.183 18 C -0.130 4.130 19 H 0.113 0.887 20 C 0.002 3.998 21 O -0.407 6.407 22 C -0.161 4.161 23 C 0.036 3.964 24 N -0.029 5.029 25 H 0.246 0.754 26 H 0.138 0.862 27 H -0.213 1.213 28 H -0.192 1.192 29 H 0.225 0.775 30 H 0.200 0.800 31 H 0.253 0.747 32 H 0.115 0.885 33 H 0.078 0.922 34 H 0.076 0.924 35 H 0.074 0.926 36 H 0.245 0.755 37 H 0.109 0.891 38 H 0.130 0.870 39 H 0.211 0.789 Dipole moment (debyes) X Y Z Total from point charges -1.574 -1.711 -1.409 2.719 hybrid contribution -0.907 -0.994 0.553 1.455 sum -2.481 -2.705 -0.857 3.769 Atomic orbital electron populations 1.86485 1.17120 1.81735 1.50730 1.25186 0.85172 1.11505 0.93465 0.93048 0.78607 0.72627 0.85127 1.22373 0.98061 0.96155 1.02511 1.22859 0.96594 1.00196 0.91745 1.70831 1.19996 1.08080 1.22246 1.20695 0.89946 0.99825 0.91398 1.20554 0.98446 0.99223 0.97970 1.96843 1.66664 1.90495 1.36913 1.21343 0.90170 0.98004 0.95477 1.19219 0.98156 1.01059 0.99197 1.17543 0.83971 0.79736 0.81954 1.90847 1.56125 1.65871 1.31420 1.45403 1.22654 1.35265 1.30853 1.21935 0.83434 0.93677 1.00117 0.88685 1.23496 0.99125 0.98934 0.96764 1.22619 0.98216 0.96464 0.95694 0.88684 1.22294 0.97003 0.95807 0.84687 1.86442 1.61603 1.57953 1.34722 1.23302 1.03517 0.94766 0.94536 1.22248 0.84939 0.90284 0.98922 1.42715 1.15003 1.24099 1.21096 0.75414 0.86248 1.21347 1.19174 0.77490 0.79953 0.74718 0.88528 0.92196 0.92373 0.92630 0.75527 0.89073 0.86995 0.78860 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 1.11 10.90 -148.98 -1.62 -0.52 16 2 C -0.04 0.11 3.06 71.24 0.22 0.33 16 3 Si 0.81 -4.27 31.34 68.60 2.15 -2.12 16 4 C -0.08 -0.10 6.24 41.01 0.26 0.16 16 5 C 0.04 0.10 10.44 83.68 0.87 0.97 16 6 N -0.49 -4.07 11.30 -194.10 -2.19 -6.26 16 7 C 0.23 1.42 7.59 134.18 1.02 2.44 16 8 C -0.08 -0.22 6.24 22.42 0.14 -0.08 16 9 Br 0.01 0.01 33.72 -20.37 -0.69 -0.67 16 10 C -0.02 0.05 9.26 22.56 0.21 0.26 16 11 C -0.17 -0.03 5.84 -20.35 -0.12 -0.14 16 12 C 0.58 1.07 7.76 86.71 0.67 1.74 16 13 O -0.56 -5.25 15.87 -4.00 -0.06 -5.32 16 14 N -0.69 2.51 5.21 -443.18 -2.31 0.20 16 15 C 0.11 -0.37 4.32 45.52 0.20 -0.17 16 16 H 0.10 0.02 7.46 -2.39 -0.02 0.00 16 17 C -0.14 0.38 7.43 31.12 0.23 0.61 16 18 C -0.11 0.56 3.89 -10.27 -0.04 0.52 16 19 H 0.09 -0.42 8.14 -2.39 -0.02 -0.44 16 20 C 0.08 -0.38 6.88 71.98 0.50 0.12 16 21 O -0.60 0.44 13.66 -148.98 -2.03 -1.60 16 22 C -0.12 0.96 7.39 31.12 0.23 1.19 16 23 C 0.16 0.31 9.91 83.65 0.83 1.13 16 24 N -0.36 -1.21 2.93 -337.71 -0.99 -2.20 16 25 H 0.40 -3.46 8.70 -74.05 -0.64 -4.10 16 26 H 0.12 -0.24 7.96 -2.39 -0.02 -0.26 16 27 H -0.29 -0.43 7.11 99.48 0.71 0.27 16 28 H -0.27 0.60 6.80 99.48 0.68 1.28 16 29 H 0.21 -0.48 6.70 -2.91 -0.02 -0.50 16 30 H 0.18 -1.67 6.44 -2.91 -0.02 -1.68 16 31 H 0.41 -3.71 6.73 -92.70 -0.62 -4.33 16 32 H 0.10 -0.31 7.90 -2.39 -0.02 -0.33 16 33 H 0.06 0.04 8.14 -2.39 -0.02 0.02 16 34 H 0.06 -0.40 8.14 -2.38 -0.02 -0.42 16 35 H 0.06 -0.35 7.84 -2.39 -0.02 -0.37 16 36 H 0.40 -3.40 9.12 -74.05 -0.68 -4.08 16 37 H 0.09 -0.87 8.14 -2.38 -0.02 -0.89 16 38 H 0.11 -1.07 8.10 -2.39 -0.02 -1.09 16 39 H 0.19 0.38 6.19 -2.91 -0.02 0.37 16 Total: 0.00 -22.62 350.82 -3.33 -25.95 By element: Atomic # 1 Polarization: -15.77 SS G_CDS: -0.79 Total: -16.56 kcal Atomic # 6 Polarization: 3.87 SS G_CDS: 5.21 Total: 9.08 kcal Atomic # 7 Polarization: -2.77 SS G_CDS: -5.50 Total: -8.26 kcal Atomic # 8 Polarization: -3.70 SS G_CDS: -3.72 Total: -7.43 kcal Atomic # 14 Polarization: -4.27 SS G_CDS: 2.15 Total: -2.12 kcal Atomic # 35 Polarization: 0.01 SS G_CDS: -0.69 Total: -0.67 kcal Total: -22.62 -3.33 -25.95 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_13270474_12335884.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 38.448 kcal (2) G-P(sol) polarization free energy of solvation -22.618 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 15.830 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.332 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.950 kcal (6) G-S(sol) free energy of system = (1) + (5) 12.498 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.91 seconds