Wall clock time and date at job start Thu Mar 4 2021 15:50:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46499 * 1 3 3 N 1.28466 * 124.88766 * 2 1 4 4 C 1.31809 * 110.07449 * 179.97438 * 3 2 1 5 5 C 1.47713 * 126.51637 * 180.02562 * 4 3 2 6 6 O 1.21575 * 119.99741 * 180.02562 * 5 4 3 7 7 N 1.34777 * 120.00109 * 0.03147 * 5 4 3 8 8 C 1.46498 * 119.99754 * 179.97438 * 7 5 4 9 9 H 1.08999 * 109.47229 * 35.00088 * 8 7 5 10 10 C 1.53010 * 109.46705 * 154.99872 * 8 7 5 11 11 C 1.52997 * 109.46854 * 180.02562 * 10 8 7 12 12 C 1.53007 * 109.47016 * 300.00225 * 11 10 8 13 13 H 1.08994 * 109.46633 * 299.99880 * 12 11 10 14 14 C 1.50703 * 109.46833 * 180.02562 * 12 11 10 15 15 N 1.30640 * 119.25357 * 334.72180 * 14 12 11 16 16 C 1.33520 * 121.50582 * 179.76279 * 15 14 12 17 17 C 1.36202 * 119.90669 * 0.51298 * 16 15 14 18 18 C 1.41026 * 118.59437 * 359.75435 * 17 16 15 19 19 O 1.21984 * 120.70937 * 179.97438 * 18 17 16 20 20 N 1.34744 * 119.25513 * 155.00012 * 14 12 11 21 21 C 1.52994 * 109.47320 * 60.00145 * 12 11 10 22 22 C 1.52995 * 109.47104 * 274.99811 * 8 7 5 23 23 C 1.41498 * 106.96339 * 359.75594 * 4 3 2 24 24 C 1.35037 * 124.87984 * 179.97438 * 2 1 3 25 25 C 1.50699 * 126.38872 * 0.02562 * 24 2 1 26 26 O 1.42894 * 109.47188 * 29.99903 * 25 24 2 27 27 Si 1.86298 * 109.46950 * 150.00577 * 25 24 2 28 28 H 1.09000 * 109.47391 * 270.02559 * 1 2 3 29 29 H 1.08998 * 109.46840 * 30.02734 * 1 2 3 30 30 H 1.09001 * 109.47157 * 150.02031 * 1 2 3 31 31 H 0.97000 * 119.99869 * 359.97438 * 7 5 4 32 32 H 1.08999 * 109.46989 * 299.99817 * 10 8 7 33 33 H 1.08999 * 109.47101 * 60.00138 * 10 8 7 34 34 H 1.08999 * 109.47221 * 60.00129 * 11 10 8 35 35 H 1.08996 * 109.47030 * 179.97438 * 11 10 8 36 36 H 1.07993 * 120.04990 * 180.26479 * 16 15 14 37 37 H 1.08001 * 120.70126 * 179.77182 * 17 16 15 38 38 H 0.97006 * 120.03957 * 359.97438 * 20 14 12 39 39 H 1.08999 * 109.47170 * 59.99941 * 21 12 11 40 40 H 1.09002 * 109.47066 * 179.97438 * 21 12 11 41 41 H 1.09001 * 109.47403 * 299.99689 * 22 8 7 42 42 H 1.08996 * 109.47269 * 60.00217 * 22 8 7 43 43 H 1.08001 * 127.25144 * 180.26818 * 23 4 3 44 44 H 1.09006 * 109.46662 * 270.00173 * 25 24 2 45 45 H 0.96709 * 113.99337 * 60.00344 * 26 25 24 46 46 H 1.48506 * 109.99834 * 180.02562 * 27 25 24 47 47 H 1.48502 * 110.00011 * 301.31529 * 27 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 7 2.1998 1.0538 0.0000 4 6 3.4741 0.7168 0.0006 5 6 4.6273 1.6397 0.0013 6 8 5.7598 1.1975 0.0013 7 7 4.4242 2.9721 0.0021 8 6 5.5680 3.8874 0.0033 9 1 6.3780 3.4576 -0.5859 10 6 5.1496 5.2273 -0.6057 11 6 6.3444 6.1830 -0.6050 12 6 6.8209 6.4026 0.8323 13 1 6.0112 6.8327 1.4217 14 6 7.9974 7.3445 0.8330 15 7 8.7427 7.4359 -0.2360 16 6 9.7928 8.2590 -0.2862 17 6 10.1122 9.0192 0.7978 18 6 9.3109 8.9167 1.9538 19 8 9.5621 9.5794 2.9467 20 7 8.2600 8.0692 1.9382 21 6 7.2392 5.0629 1.4412 22 6 6.0439 4.1070 1.4407 23 6 3.5272 -0.6972 0.0067 24 6 2.2372 -1.1078 0.0005 25 6 1.7533 -2.5349 0.0006 26 8 0.4956 -2.6115 -0.6734 27 14 2.9948 -3.6117 -0.8768 28 1 -0.3634 0.0005 1.0276 29 1 -0.3633 0.8897 -0.5143 30 1 -0.3633 -0.8902 -0.5135 31 1 3.5206 3.3249 0.0018 32 1 4.8106 5.0708 -1.6298 33 1 4.3397 5.6571 -0.0165 34 1 7.1541 5.7530 -1.1945 35 1 6.0465 7.1373 -1.0393 36 1 10.3904 8.3190 -1.1837 37 1 10.9609 9.6866 0.7725 38 1 7.6948 7.9820 2.7217 39 1 8.0489 4.6328 0.8517 40 1 7.5792 5.2194 2.4650 41 1 5.2339 4.5369 2.0300 42 1 6.3419 3.1525 1.8746 43 1 4.4107 -1.3182 0.0128 44 1 1.6362 -2.8788 1.0284 45 1 0.5251 -2.3202 -1.5952 46 1 2.5289 -5.0217 -0.8841 47 1 3.1872 -3.1337 -2.2696 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_13456076_13259642.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 15:50:09 Heat of formation + Delta-G solvation = 13.493253 kcal Electronic energy + Delta-G solvation = -31491.670068 eV Core-core repulsion = 27063.923253 eV Total energy + Delta-G solvation = -4427.746815 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 360.163 amu Computer time = 1.30 seconds Orbital eigenvalues (eV) -43.81697 -42.88094 -40.91189 -39.52125 -38.45499 -38.22230 -35.84302 -35.14239 -34.36898 -32.82212 -32.31046 -31.77300 -30.24180 -28.44818 -26.80688 -25.86663 -25.39496 -24.15080 -23.69534 -22.46647 -22.11995 -21.20549 -20.58189 -19.75274 -19.24241 -19.01365 -17.81005 -17.58809 -17.51397 -17.35736 -17.05457 -17.01080 -16.16737 -15.98601 -15.82261 -15.75439 -15.60256 -15.35775 -15.11888 -14.96800 -14.79139 -14.42243 -14.12647 -14.04903 -13.96828 -13.64462 -13.40388 -13.37118 -13.13323 -12.62783 -12.51254 -12.35321 -12.21053 -12.10007 -12.01900 -11.98446 -11.58594 -11.39670 -11.32755 -11.15548 -11.06180 -10.99536 -10.26539 -9.96389 -9.93951 -9.65152 -4.88244 -0.43869 0.47715 0.69501 0.84025 1.23375 1.56462 1.58043 1.68733 1.95387 2.15351 2.35330 2.51955 2.79590 3.04430 3.34680 3.36397 3.44657 3.60154 3.66673 3.74041 3.98465 4.05927 4.18178 4.20573 4.31372 4.33238 4.36490 4.37815 4.41983 4.45495 4.51890 4.52675 4.54738 4.67147 4.69950 4.75419 4.84507 4.90340 5.03987 5.10111 5.18998 5.23990 5.28850 5.33975 5.36928 5.43762 5.48926 5.58306 5.69705 6.25248 6.44661 6.68146 6.72754 6.85283 7.18224 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.064 3.936 2 N -0.265 5.265 3 N -0.264 5.264 4 C -0.040 4.040 5 C 0.604 3.396 6 O -0.564 6.564 7 N -0.704 5.704 8 C 0.142 3.858 9 H 0.073 0.927 10 C -0.118 4.118 11 C -0.091 4.091 12 C -0.040 4.040 13 H 0.130 0.870 14 C 0.410 3.590 15 N -0.544 5.544 16 C 0.173 3.827 17 C -0.319 4.319 18 C 0.509 3.491 19 O -0.594 6.594 20 N -0.615 5.615 21 C -0.102 4.102 22 C -0.120 4.120 23 C -0.188 4.188 24 C -0.015 4.015 25 C -0.044 4.044 26 O -0.536 6.536 27 Si 0.783 3.217 28 H 0.092 0.908 29 H 0.103 0.897 30 H 0.129 0.871 31 H 0.414 0.586 32 H 0.078 0.922 33 H 0.091 0.909 34 H 0.077 0.923 35 H 0.081 0.919 36 H 0.198 0.802 37 H 0.159 0.841 38 H 0.428 0.572 39 H 0.066 0.934 40 H 0.078 0.922 41 H 0.086 0.914 42 H 0.055 0.945 43 H 0.181 0.819 44 H 0.145 0.855 45 H 0.390 0.610 46 H -0.284 1.284 47 H -0.293 1.293 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.310 -3.067 -2.381 8.277 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.074 4.074 2 N -0.054 5.054 3 N -0.102 5.102 4 C -0.198 4.198 5 C 0.389 3.611 6 O -0.441 6.441 7 N -0.354 5.354 8 C 0.038 3.962 9 H 0.091 0.909 10 C -0.156 4.156 11 C -0.129 4.129 12 C -0.060 4.060 13 H 0.148 0.852 14 C 0.146 3.854 15 N -0.267 5.267 16 C 0.034 3.966 17 C -0.343 4.343 18 C 0.310 3.690 19 O -0.477 6.477 20 N -0.252 5.252 21 C -0.142 4.142 22 C -0.159 4.159 23 C -0.215 4.215 24 C -0.140 4.140 25 C -0.154 4.154 26 O -0.344 6.344 27 Si 0.686 3.314 28 H 0.111 0.889 29 H 0.122 0.878 30 H 0.147 0.853 31 H 0.251 0.749 32 H 0.097 0.903 33 H 0.109 0.891 34 H 0.095 0.905 35 H 0.100 0.900 36 H 0.215 0.785 37 H 0.176 0.824 38 H 0.269 0.731 39 H 0.085 0.915 40 H 0.097 0.903 41 H 0.105 0.895 42 H 0.073 0.927 43 H 0.198 0.802 44 H 0.162 0.838 45 H 0.240 0.760 46 H -0.211 1.211 47 H -0.220 1.220 Dipole moment (debyes) X Y Z Total from point charges -7.163 -3.104 -2.722 8.268 hybrid contribution -0.460 0.577 0.454 0.866 sum -7.623 -2.527 -2.267 8.345 Atomic orbital electron populations 1.22874 0.70899 1.07610 1.06066 1.45691 1.08926 1.01909 1.48873 1.73452 1.02722 1.14754 1.19299 1.21880 0.90975 0.94519 1.12469 1.17019 0.86228 0.82282 0.75562 1.90795 1.23745 1.77774 1.51823 1.45858 1.11251 1.04579 1.73724 1.21145 0.88214 0.89820 0.97024 0.90886 1.21785 0.98906 0.92581 1.02319 1.21317 0.97803 1.00310 0.93504 1.20673 0.91572 0.92579 1.01226 0.85182 1.23691 0.93811 0.87024 0.80880 1.68391 1.09276 1.24872 1.24159 1.23181 0.89887 0.85379 0.98162 1.23001 1.06608 1.10424 0.94285 1.17664 0.81381 0.79944 0.90035 1.90988 1.72196 1.47256 1.37228 1.44632 1.27761 1.35418 1.17412 1.21499 0.98423 0.92627 1.01614 1.21837 0.98261 0.99320 0.96479 1.21722 0.97356 0.93668 1.08793 1.22123 0.91040 0.92063 1.08792 1.24847 0.93216 0.92221 1.05117 1.86558 1.29556 1.88210 1.30098 0.93189 0.83919 0.74734 0.79541 0.88903 0.87848 0.85311 0.74895 0.90314 0.89088 0.90473 0.90006 0.78496 0.82376 0.73095 0.91506 0.90304 0.89534 0.92651 0.80196 0.83780 0.75959 1.21106 1.21992 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.48 11.00 127.77 1.41 0.92 16 2 N -0.26 0.22 3.70 -355.92 -1.32 -1.10 16 3 N -0.26 -0.69 11.67 -48.18 -0.56 -1.25 16 4 C -0.04 -0.19 7.13 42.46 0.30 0.11 16 5 C 0.60 3.61 7.79 86.75 0.68 4.28 16 6 O -0.56 -6.96 16.59 -3.95 -0.07 -7.03 16 7 N -0.70 0.56 5.07 -445.52 -2.26 -1.70 16 8 C 0.14 -0.46 2.45 44.99 0.11 -0.35 16 9 H 0.07 0.12 7.58 -2.39 -0.02 0.10 16 10 C -0.12 1.01 5.39 30.60 0.16 1.17 16 11 C -0.09 0.72 4.67 30.60 0.14 0.86 16 12 C -0.04 0.35 2.48 -11.54 -0.03 0.32 16 13 H 0.13 -1.79 8.14 -2.39 -0.02 -1.81 16 14 C 0.41 -1.37 6.73 138.18 0.93 -0.44 16 15 N -0.54 0.50 9.12 -187.56 -1.71 -1.21 16 16 C 0.17 -0.21 11.20 83.96 0.94 0.73 16 17 C -0.32 -1.09 10.07 22.48 0.23 -0.86 16 18 C 0.51 3.89 7.75 84.89 0.66 4.55 16 19 O -0.59 -10.13 17.97 -5.26 -0.09 -10.23 16 20 N -0.61 0.54 5.25 -310.69 -1.63 -1.09 16 21 C -0.10 0.66 5.19 30.61 0.16 0.82 16 22 C -0.12 0.56 5.50 30.61 0.17 0.73 16 23 C -0.19 -0.38 9.35 22.41 0.21 -0.17 16 24 C -0.01 0.02 6.17 41.40 0.26 0.27 16 25 C -0.04 0.24 2.99 71.24 0.21 0.45 16 26 O -0.54 3.11 10.02 -148.98 -1.49 1.61 16 27 Si 0.78 -3.51 31.24 68.60 2.14 -1.37 16 28 H 0.09 -0.80 8.14 -2.39 -0.02 -0.82 16 29 H 0.10 -0.97 8.14 -2.39 -0.02 -0.99 16 30 H 0.13 -1.29 5.00 -2.39 -0.01 -1.30 16 31 H 0.41 -1.72 8.33 -92.71 -0.77 -2.50 16 32 H 0.08 -0.61 8.14 -2.39 -0.02 -0.63 16 33 H 0.09 -1.07 8.14 -2.39 -0.02 -1.09 16 34 H 0.08 -0.36 7.76 -2.39 -0.02 -0.37 16 35 H 0.08 -0.68 8.14 -2.39 -0.02 -0.70 16 36 H 0.20 -1.48 8.06 -2.91 -0.02 -1.50 16 37 H 0.16 0.35 8.06 -2.91 -0.02 0.32 16 38 H 0.43 -2.37 8.78 -92.70 -0.81 -3.18 16 39 H 0.07 -0.20 8.14 -2.39 -0.02 -0.22 16 40 H 0.08 -0.59 8.14 -2.39 -0.02 -0.61 16 41 H 0.09 -0.68 8.14 -2.39 -0.02 -0.70 16 42 H 0.05 0.04 8.14 -2.39 -0.02 0.02 16 43 H 0.18 -0.20 7.04 -2.91 -0.02 -0.22 16 44 H 0.14 -1.17 7.96 -2.38 -0.02 -1.19 16 45 H 0.39 -4.11 8.39 -74.05 -0.62 -4.73 16 46 H -0.28 -0.41 7.11 99.48 0.71 0.30 16 47 H -0.29 -0.56 7.11 99.48 0.71 0.15 16 Total: 0.00 -30.05 389.09 -1.58 -31.63 By element: Atomic # 1 Polarization: -20.54 SS G_CDS: -1.12 Total: -21.66 kcal Atomic # 6 Polarization: 6.87 SS G_CDS: 6.53 Total: 13.40 kcal Atomic # 7 Polarization: 1.12 SS G_CDS: -7.48 Total: -6.36 kcal Atomic # 8 Polarization: -13.99 SS G_CDS: -1.65 Total: -15.64 kcal Atomic # 14 Polarization: -3.51 SS G_CDS: 2.14 Total: -1.37 kcal Total: -30.05 -1.58 -31.63 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_13456076_13259642.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 45.122 kcal (2) G-P(sol) polarization free energy of solvation -30.049 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 15.072 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.579 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.628 kcal (6) G-S(sol) free energy of system = (1) + (5) 13.493 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.30 seconds