Wall clock time and date at job start Thu Mar 4 2021 15:52:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86298 * 109.47313 * 2 1 4 4 C 1.50696 * 109.46920 * 120.00152 * 2 1 3 5 5 C 1.35010 * 126.42555 * 209.97275 * 4 2 1 6 6 N 1.33589 * 108.65318 * 180.02562 * 5 4 2 7 7 C 1.32418 * 109.22230 * 359.97438 * 6 5 4 8 8 C 1.41253 * 132.11248 * 180.02562 * 7 6 5 9 9 Br 1.89098 * 120.25611 * 359.95711 * 8 7 6 10 10 C 1.35700 * 119.48373 * 179.97438 * 8 7 6 11 11 C 1.41758 * 119.53701 * 0.02562 * 10 8 7 12 12 C 1.47579 * 120.01083 * 179.97438 * 11 10 8 13 13 O 1.21592 * 120.00024 * 179.97438 * 12 11 10 14 14 N 1.34774 * 119.99938 * 359.97438 * 12 11 10 15 15 C 1.46507 * 119.99895 * 179.97438 * 14 12 11 16 16 C 1.52999 * 109.46733 * 179.03427 * 15 14 12 17 17 C 1.50697 * 112.85389 * 66.14480 * 16 15 14 18 18 C 1.38240 * 119.99465 * 245.83139 * 17 16 15 19 19 C 1.38235 * 119.99528 * 179.76445 * 18 17 16 20 20 C 1.38237 * 120.00125 * 0.48187 * 19 18 17 21 21 C 1.38241 * 120.00086 * 359.78869 * 20 19 18 22 22 C 1.38227 * 120.00218 * 66.09904 * 17 16 15 23 23 C 1.53779 * 113.61458 * 294.94053 * 16 15 14 24 24 C 1.53783 * 87.08317 * 270.89034 * 23 16 15 25 25 H 1.08998 * 113.61383 * 89.11446 * 24 23 16 26 26 F 1.39908 * 113.61121 * 219.93398 * 24 23 16 27 27 C 1.53777 * 87.07945 * 334.56754 * 24 23 16 28 28 C 1.36499 * 119.98208 * 0.25485 * 11 10 8 29 29 N 1.35943 * 120.49875 * 359.48196 * 28 11 10 30 30 H 0.96705 * 114.00419 * 300.00350 * 1 2 3 31 31 H 1.09001 * 109.46815 * 240.00393 * 2 1 3 32 32 H 1.48503 * 110.00093 * 300.00221 * 3 2 1 33 33 H 1.48503 * 109.99943 * 61.31839 * 3 2 1 34 34 H 1.07998 * 125.67224 * 0.04041 * 5 4 2 35 35 H 1.08005 * 120.23485 * 179.97438 * 10 8 7 36 36 H 0.96998 * 119.99859 * 359.97438 * 14 12 11 37 37 H 1.08998 * 109.47012 * 299.03329 * 15 14 12 38 38 H 1.08996 * 109.46580 * 59.03082 * 15 14 12 39 39 H 1.07990 * 120.00262 * 359.97438 * 18 17 16 40 40 H 1.07994 * 120.00140 * 180.24800 * 19 18 17 41 41 H 1.08004 * 120.00394 * 179.76971 * 20 19 18 42 42 H 1.07990 * 120.00124 * 179.97438 * 21 20 19 43 43 H 1.08003 * 120.00221 * 0.02562 * 22 17 16 44 44 H 1.09001 * 113.61504 * 25.43550 * 23 16 15 45 45 H 1.08999 * 113.61404 * 156.25577 * 23 16 15 46 46 H 1.09001 * 113.61583 * 270.88742 * 27 24 23 47 47 H 1.08997 * 113.61595 * 139.98421 * 27 24 23 48 48 H 1.07995 * 119.75134 * 179.68883 * 28 11 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9312 -0.7104 1.2304 5 6 3.0857 -0.4615 1.8847 6 7 3.1769 -1.2969 2.9232 7 6 2.1068 -2.0764 2.9510 8 6 1.7122 -3.1126 3.8261 9 35 2.8134 -3.5993 5.2843 10 6 0.5369 -3.7562 3.6120 11 6 -0.2763 -3.3795 2.5137 12 6 -1.5562 -4.0728 2.2707 13 8 -2.2537 -3.7492 1.3288 14 7 -1.9519 -5.0647 3.0929 15 6 -3.2228 -5.7526 2.8521 16 6 -3.4204 -6.8429 3.9071 17 6 -3.5988 -6.2875 5.2966 18 6 -2.6447 -6.5323 6.2665 19 6 -2.8059 -6.0187 7.5397 20 6 -3.9260 -5.2686 7.8458 21 6 -4.8829 -5.0285 6.8773 22 6 -4.7191 -5.5378 5.6027 23 6 -2.3829 -7.9750 3.8247 24 6 -3.3401 -8.6746 2.8453 25 1 -3.1773 -8.3985 1.8035 26 9 -3.4222 -10.0585 3.0342 27 6 -4.4778 -7.8903 3.5199 28 6 0.1276 -2.3791 1.6774 29 7 1.3024 -1.7305 1.8945 30 1 -0.3934 0.4418 0.7650 31 1 1.7922 -0.5138 -0.8900 32 1 1.5615 2.4679 -1.2085 33 1 1.5879 2.4585 1.2243 34 1 3.8141 0.2884 1.6138 35 1 0.2235 -4.5505 4.2733 36 1 -1.3953 -5.3231 3.8441 37 1 -4.0414 -5.0354 2.9131 38 1 -3.2089 -6.2047 1.8604 39 1 -1.7718 -7.1219 6.0286 40 1 -2.0586 -6.2065 8.2964 41 1 -4.0539 -4.8705 8.8415 42 1 -5.7581 -4.4429 7.1165 43 1 -5.4668 -5.3505 4.8462 44 1 -1.4397 -7.6707 3.3710 45 1 -2.2472 -8.5121 4.7635 46 1 -4.9159 -8.4051 4.3750 47 1 -5.2258 -7.5175 2.8202 48 1 -0.4924 -2.0985 0.8388 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_13458982_12335884.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 15:52:44 Heat of formation + Delta-G solvation = 45.850484 kcal Electronic energy + Delta-G solvation = -37248.559158 eV Core-core repulsion = 32233.336691 eV Total energy + Delta-G solvation = -5015.222467 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 460.058 amu Computer time = 1.61 seconds Orbital eigenvalues (eV) -48.56728 -44.27598 -41.78065 -40.72595 -38.85203 -38.49822 -38.08957 -35.76334 -35.14495 -32.72129 -32.03223 -31.84811 -31.81418 -30.29665 -28.77163 -27.12390 -26.90616 -25.65795 -24.61816 -24.09712 -23.22454 -22.59235 -22.49928 -21.85053 -20.16338 -19.52606 -18.74501 -18.32398 -18.22248 -17.82026 -17.55143 -17.41546 -16.97660 -16.60972 -16.39244 -16.21117 -16.09732 -15.94184 -15.87438 -15.65988 -15.49829 -15.32696 -14.88134 -14.69260 -14.65103 -14.51653 -14.27817 -14.11460 -13.67355 -13.54923 -13.47544 -13.40610 -13.32818 -13.02475 -12.77629 -12.51741 -12.43112 -12.19409 -12.15989 -11.78685 -11.59171 -11.41494 -11.39683 -11.33881 -11.28650 -11.23701 -11.07475 -10.34972 -10.02974 -9.82173 -9.64884 -9.10072 -4.94382 -0.92983 -0.40524 0.17415 0.40603 0.49566 0.95277 1.11074 1.39725 1.66801 1.79441 1.85936 1.99271 2.20116 2.79546 2.81985 2.97555 3.08375 3.14425 3.24941 3.35152 3.40853 3.44989 3.45677 3.57919 3.60728 3.84235 3.88128 4.09771 4.12770 4.13811 4.21618 4.28397 4.29837 4.36594 4.42183 4.46726 4.48519 4.61087 4.65067 4.67292 4.69800 4.73235 4.86224 4.93919 4.95747 5.09653 5.14304 5.16997 5.28202 5.31539 5.54842 5.58284 5.63491 5.65195 6.09598 6.17445 6.22373 6.48590 6.89437 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.547 6.547 2 C -0.053 4.053 3 Si 0.816 3.184 4 C -0.089 4.089 5 C 0.045 3.955 6 N -0.492 5.492 7 C 0.223 3.777 8 C -0.077 4.077 9 Br 0.007 6.993 10 C -0.028 4.028 11 C -0.169 4.169 12 C 0.580 3.420 13 O -0.562 6.562 14 N -0.702 5.702 15 C 0.146 3.854 16 C -0.042 4.042 17 C -0.072 4.072 18 C -0.122 4.122 19 C -0.125 4.125 20 C -0.133 4.133 21 C -0.130 4.130 22 C -0.120 4.120 23 C -0.149 4.149 24 C 0.055 3.945 25 H 0.125 0.875 26 F -0.224 7.224 27 C -0.137 4.137 28 C 0.158 3.842 29 N -0.359 5.359 30 H 0.386 0.614 31 H 0.139 0.861 32 H -0.290 1.290 33 H -0.290 1.290 34 H 0.229 0.771 35 H 0.180 0.820 36 H 0.412 0.588 37 H 0.076 0.924 38 H 0.085 0.915 39 H 0.142 0.858 40 H 0.136 0.864 41 H 0.129 0.871 42 H 0.128 0.872 43 H 0.127 0.873 44 H 0.098 0.902 45 H 0.105 0.895 46 H 0.096 0.904 47 H 0.098 0.902 48 H 0.191 0.809 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.854 0.282 0.947 1.306 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.354 6.354 2 C -0.160 4.160 3 Si 0.717 3.283 4 C -0.199 4.199 5 C -0.104 4.104 6 N -0.211 5.211 7 C -0.022 4.022 8 C -0.160 4.160 9 Br 0.093 6.907 10 C -0.053 4.053 11 C -0.177 4.177 12 C 0.366 3.634 13 O -0.442 6.442 14 N -0.354 5.354 15 C 0.023 3.977 16 C -0.042 4.042 17 C -0.073 4.073 18 C -0.140 4.140 19 C -0.142 4.142 20 C -0.151 4.151 21 C -0.148 4.148 22 C -0.138 4.138 23 C -0.187 4.187 24 C 0.019 3.981 25 H 0.143 0.857 26 F -0.205 7.205 27 C -0.175 4.175 28 C 0.031 3.969 29 N -0.032 5.032 30 H 0.235 0.765 31 H 0.157 0.843 32 H -0.217 1.217 33 H -0.217 1.217 34 H 0.245 0.755 35 H 0.197 0.803 36 H 0.250 0.750 37 H 0.094 0.906 38 H 0.103 0.897 39 H 0.160 0.840 40 H 0.154 0.846 41 H 0.147 0.853 42 H 0.146 0.854 43 H 0.145 0.855 44 H 0.117 0.883 45 H 0.124 0.876 46 H 0.114 0.886 47 H 0.116 0.884 48 H 0.208 0.792 Dipole moment (debyes) X Y Z Total from point charges 1.311 0.819 0.798 1.740 hybrid contribution -1.957 -0.267 0.206 1.986 sum -0.647 0.552 1.004 1.316 Atomic orbital electron populations 1.86591 1.18343 1.80111 1.50375 1.25204 0.83357 1.12300 0.95182 0.93457 0.89327 0.68718 0.76751 1.22419 0.98378 0.96493 1.02647 1.23040 0.96453 0.99939 0.90979 1.70848 1.19826 1.08084 1.22313 1.20712 0.90010 0.99943 0.91491 1.20569 0.98352 0.99154 0.97906 1.96841 1.66546 1.90473 1.36886 1.21300 0.90326 0.98141 0.95581 1.19238 0.98225 1.01170 0.99023 1.17478 0.84092 0.79730 0.82071 1.90856 1.55974 1.66054 1.31354 1.45595 1.23321 1.35475 1.31000 1.21237 0.85401 0.93274 0.97759 1.20573 0.98808 0.92980 0.91885 1.19475 0.95207 0.98436 0.94137 1.21317 0.99598 1.00189 0.92894 1.21425 0.98059 0.97478 0.97282 1.21451 0.94711 0.98970 1.00009 1.21380 0.99714 1.00084 0.93649 1.21136 0.97862 0.97832 0.96976 1.23795 0.98386 0.95539 1.00960 1.23377 0.98879 0.74293 1.01553 0.85739 1.92792 1.97009 1.33903 1.96817 1.23619 0.96857 0.95221 1.01821 1.22205 0.85211 0.90461 0.98997 1.42742 1.15079 1.24154 1.21222 0.76455 0.84326 1.21651 1.21673 0.75514 0.80276 0.75002 0.90623 0.89662 0.83999 0.84646 0.85334 0.85392 0.85482 0.88322 0.87627 0.88581 0.88390 0.79201 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 0.22 10.91 -148.98 -1.63 -1.40 16 2 C -0.05 0.18 3.06 71.23 0.22 0.40 16 3 Si 0.82 -4.64 31.18 68.60 2.14 -2.50 16 4 C -0.09 -0.01 6.24 41.01 0.26 0.24 16 5 C 0.05 0.01 10.44 83.68 0.87 0.89 16 6 N -0.49 -3.29 11.30 -194.10 -2.19 -5.48 16 7 C 0.22 1.24 7.59 134.18 1.02 2.26 16 8 C -0.08 -0.18 6.24 22.42 0.14 -0.04 16 9 Br 0.01 0.01 33.72 -20.37 -0.69 -0.67 16 10 C -0.03 0.07 9.26 22.55 0.21 0.28 16 11 C -0.17 0.03 5.84 -20.35 -0.12 -0.09 16 12 C 0.58 0.41 7.76 86.71 0.67 1.09 16 13 O -0.56 -4.44 16.27 -4.01 -0.07 -4.51 16 14 N -0.70 3.52 5.11 -466.22 -2.38 1.14 16 15 C 0.15 -0.78 4.85 86.38 0.42 -0.36 16 16 C -0.04 0.29 0.63 -52.40 -0.03 0.26 16 17 C -0.07 0.32 4.61 -19.87 -0.09 0.23 16 18 C -0.12 0.60 9.05 22.27 0.20 0.80 16 19 C -0.12 0.39 10.05 22.27 0.22 0.62 16 20 C -0.13 0.21 10.05 22.27 0.22 0.43 16 21 C -0.13 0.16 10.05 22.27 0.22 0.39 16 22 C -0.12 0.28 9.33 22.27 0.21 0.49 16 23 C -0.15 1.12 6.03 31.12 0.19 1.30 16 24 C 0.05 -0.24 5.31 31.12 0.17 -0.08 16 25 H 0.13 -0.91 7.61 -2.39 -0.02 -0.93 16 26 F -0.22 -0.70 17.41 44.97 0.78 0.08 16 27 C -0.14 0.79 7.00 31.12 0.22 1.01 16 28 C 0.16 0.29 9.91 83.65 0.83 1.12 16 29 N -0.36 -1.10 2.93 -337.71 -0.99 -2.09 16 30 H 0.39 -1.75 8.70 -74.05 -0.64 -2.39 16 31 H 0.14 -0.81 7.96 -2.39 -0.02 -0.83 16 32 H -0.29 -0.35 7.11 99.48 0.71 0.35 16 33 H -0.29 -0.09 7.11 99.48 0.71 0.62 16 34 H 0.23 -1.90 6.90 -2.91 -0.02 -1.92 16 35 H 0.18 -1.61 6.44 -2.91 -0.02 -1.63 16 36 H 0.41 -3.71 6.24 -92.71 -0.58 -4.29 16 37 H 0.08 -0.25 7.95 -2.39 -0.02 -0.27 16 38 H 0.09 -0.47 7.31 -2.39 -0.02 -0.49 16 39 H 0.14 -1.27 6.41 -2.92 -0.02 -1.29 16 40 H 0.14 -0.82 8.06 -2.91 -0.02 -0.85 16 41 H 0.13 -0.49 8.06 -2.91 -0.02 -0.51 16 42 H 0.13 -0.42 8.06 -2.92 -0.02 -0.45 16 43 H 0.13 -0.53 8.06 -2.91 -0.02 -0.55 16 44 H 0.10 -0.98 7.89 -2.39 -0.02 -1.00 16 45 H 0.11 -0.74 6.79 -2.39 -0.02 -0.75 16 46 H 0.10 -0.35 8.10 -2.39 -0.02 -0.37 16 47 H 0.10 -0.74 8.10 -2.39 -0.02 -0.76 16 48 H 0.19 0.42 6.20 -2.91 -0.02 0.40 16 Total: 0.00 -23.00 421.17 0.90 -22.10 By element: Atomic # 1 Polarization: -17.78 SS G_CDS: -0.13 Total: -17.90 kcal Atomic # 6 Polarization: 5.20 SS G_CDS: 6.04 Total: 11.24 kcal Atomic # 7 Polarization: -0.87 SS G_CDS: -5.57 Total: -6.43 kcal Atomic # 8 Polarization: -4.22 SS G_CDS: -1.69 Total: -5.91 kcal Atomic # 9 Polarization: -0.70 SS G_CDS: 0.78 Total: 0.08 kcal Atomic # 14 Polarization: -4.64 SS G_CDS: 2.14 Total: -2.50 kcal Atomic # 35 Polarization: 0.01 SS G_CDS: -0.69 Total: -0.67 kcal Total: -23.00 0.90 -22.10 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_13458982_12335884.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 67.953 kcal (2) G-P(sol) polarization free energy of solvation -22.998 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 44.955 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.895 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.102 kcal (6) G-S(sol) free energy of system = (1) + (5) 45.850 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.61 seconds