Wall clock time and date at job start Thu Mar 4 2021 15:52:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46502 * 1 3 3 N 1.28466 * 124.88536 * 2 1 4 4 C 1.31805 * 110.07575 * 180.02562 * 3 2 1 5 5 C 1.47706 * 126.52066 * 180.02562 * 4 3 2 6 6 O 1.21569 * 120.00124 * 180.02562 * 5 4 3 7 7 N 1.34772 * 120.00074 * 0.02562 * 5 4 3 8 8 C 1.46503 * 120.00264 * 180.02562 * 7 5 4 9 9 C 1.53001 * 109.47232 * 185.40328 * 8 7 5 10 10 C 1.50703 * 112.90517 * 54.12529 * 9 8 7 11 11 C 1.38228 * 120.00090 * 76.69906 * 10 9 8 12 12 C 1.38232 * 120.00089 * 179.76355 * 11 10 9 13 13 C 1.38236 * 119.99893 * 0.49088 * 12 11 10 14 14 C 1.38234 * 119.99845 * 359.78276 * 13 12 11 15 15 C 1.38231 * 119.99754 * 256.97507 * 10 9 8 16 16 C 1.53955 * 113.61521 * 282.79961 * 9 8 7 17 17 C 1.53784 * 87.10954 * 270.84198 * 16 9 8 18 18 H 1.09000 * 113.61098 * 89.19155 * 17 16 9 19 19 F 1.39899 * 113.61230 * 220.09254 * 17 16 9 20 20 C 1.53781 * 87.08262 * 334.63868 * 17 16 9 21 21 C 1.41508 * 106.96273 * 0.25955 * 4 3 2 22 22 C 1.35035 * 124.88383 * 180.02562 * 2 1 3 23 23 C 1.50701 * 126.38726 * 359.97438 * 22 2 1 24 24 O 1.42905 * 109.47033 * 30.00111 * 23 22 2 25 25 Si 1.86298 * 109.47350 * 150.00281 * 23 22 2 26 26 H 1.08994 * 109.47205 * 89.97491 * 1 2 3 27 27 H 1.09007 * 109.47195 * 209.97653 * 1 2 3 28 28 H 1.09000 * 109.47071 * 329.97410 * 1 2 3 29 29 H 0.97000 * 120.00205 * 0.02562 * 7 5 4 30 30 H 1.09000 * 109.46692 * 65.40862 * 8 7 5 31 31 H 1.08994 * 109.47452 * 305.40652 * 8 7 5 32 32 H 1.08000 * 120.00010 * 0.02562 * 11 10 9 33 33 H 1.08003 * 120.00345 * 180.25254 * 12 11 10 34 34 H 1.08001 * 120.00003 * 179.76847 * 13 12 11 35 35 H 1.08005 * 119.99838 * 179.97438 * 14 13 12 36 36 H 1.08003 * 120.00465 * 0.02562 * 15 10 9 37 37 H 1.09001 * 113.53594 * 156.28813 * 16 9 8 38 38 H 1.08995 * 113.66757 * 25.40923 * 16 9 8 39 39 H 1.08996 * 113.61790 * 139.98041 * 20 17 16 40 40 H 1.09000 * 113.61609 * 270.80337 * 20 17 16 41 41 H 1.07996 * 127.24995 * 179.73063 * 21 4 3 42 42 H 1.09007 * 109.47276 * 270.00711 * 23 22 2 43 43 H 0.96701 * 113.99462 * 60.00156 * 24 23 22 44 44 H 1.48493 * 110.00100 * 180.02562 * 25 23 22 45 45 H 1.48500 * 109.99683 * 301.32152 * 25 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 7 2.1998 1.0538 0.0000 4 6 3.4740 0.7169 -0.0006 5 6 4.6273 1.6398 -0.0002 6 8 5.7597 1.1976 -0.0013 7 7 4.4241 2.9721 0.0013 8 6 5.5679 3.8876 0.0011 9 6 5.0689 5.3273 0.1388 10 6 4.1774 5.5270 1.3373 11 6 4.7286 5.6134 2.6020 12 6 3.9113 5.8014 3.7008 13 6 2.5419 5.8930 3.5360 14 6 1.9902 5.8009 2.2719 15 6 2.8080 5.6181 1.1725 16 6 4.4907 5.9070 -1.1650 17 6 5.9166 6.3779 -1.4965 18 1 6.5042 5.6400 -2.0426 19 9 5.9660 7.6504 -2.0758 20 6 6.1836 6.3798 0.0180 21 6 3.5272 -0.6972 -0.0071 22 6 2.2373 -1.1077 -0.0005 23 6 1.7534 -2.5349 -0.0006 24 8 0.4952 -2.6112 -0.6738 25 14 2.9943 -3.6114 -0.8794 26 1 -0.3633 0.0004 -1.0276 27 1 -0.3634 -0.8902 0.5135 28 1 -0.3633 0.8897 0.5142 29 1 3.5206 3.3250 0.0025 30 1 6.1179 3.7816 -0.9341 31 1 6.2245 3.6490 0.8377 32 1 5.7982 5.5381 2.7312 33 1 4.3423 5.8730 4.6885 34 1 1.9030 6.0361 4.3949 35 1 0.9202 5.8720 2.1432 36 1 2.3769 5.5458 0.1849 37 1 3.7874 6.7240 -1.0038 38 1 4.1108 5.1492 -1.8501 39 1 7.1704 6.0037 0.2879 40 1 5.9445 7.3266 0.5023 41 1 4.4108 -1.3181 -0.0133 42 1 1.6370 -2.8792 1.0271 43 1 0.5240 -2.3196 -1.5954 44 1 2.5284 -5.0213 -0.8869 45 1 3.1856 -3.1327 -2.2721 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_13458982_13259642.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 15:52:48 Heat of formation + Delta-G solvation = 22.159733 kcal Electronic energy + Delta-G solvation = -30483.742233 eV Core-core repulsion = 26191.988883 eV Total energy + Delta-G solvation = -4291.753351 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 346.148 amu Computer time = 1.08 seconds Orbital eigenvalues (eV) -48.57863 -43.84273 -41.59822 -40.17263 -38.75091 -38.16327 -35.41861 -34.39227 -32.66104 -31.99552 -31.86229 -29.39853 -27.97263 -27.11270 -26.65786 -25.15547 -23.84445 -23.21361 -22.53203 -22.17197 -21.00813 -20.00891 -19.08111 -18.34585 -17.65784 -17.56665 -17.50844 -17.12284 -16.85508 -16.58163 -16.24384 -16.06537 -15.80173 -15.76481 -15.53940 -15.48757 -15.08864 -14.85840 -14.55316 -14.46243 -14.27168 -14.08051 -13.74014 -13.59728 -13.55860 -13.40938 -13.31792 -12.68659 -12.54741 -12.39851 -12.27592 -12.19504 -11.99444 -11.82439 -11.40661 -11.31122 -11.22565 -11.07692 -10.34083 -10.03213 -9.97497 -9.83414 -9.66086 -4.88898 0.39779 0.44009 0.48084 0.82327 1.22310 1.54226 1.67410 1.93845 2.06198 2.30138 2.81769 3.09169 3.12895 3.21591 3.32612 3.35682 3.45008 3.55048 3.61915 3.88080 3.99885 4.10209 4.11713 4.21168 4.28292 4.29017 4.35515 4.43949 4.48132 4.50690 4.59168 4.64207 4.64975 4.67776 4.68559 4.71039 4.72834 4.85786 4.93331 5.08793 5.13181 5.23608 5.27344 5.31513 5.56560 5.62217 5.62728 5.67010 6.08418 6.27430 6.34292 6.80389 7.08345 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.078 3.922 2 N -0.264 5.264 3 N -0.264 5.264 4 C -0.041 4.041 5 C 0.604 3.396 6 O -0.563 6.563 7 N -0.704 5.704 8 C 0.145 3.855 9 C -0.044 4.044 10 C -0.071 4.071 11 C -0.120 4.120 12 C -0.129 4.129 13 C -0.133 4.133 14 C -0.125 4.125 15 C -0.123 4.123 16 C -0.148 4.148 17 C 0.057 3.943 18 H 0.128 0.872 19 F -0.224 7.224 20 C -0.136 4.136 21 C -0.186 4.186 22 C -0.013 4.013 23 C -0.044 4.044 24 O -0.537 6.537 25 Si 0.782 3.218 26 H 0.101 0.899 27 H 0.116 0.884 28 H 0.100 0.900 29 H 0.412 0.588 30 H 0.084 0.916 31 H 0.076 0.924 32 H 0.130 0.870 33 H 0.132 0.868 34 H 0.132 0.868 35 H 0.135 0.865 36 H 0.133 0.867 37 H 0.099 0.901 38 H 0.092 0.908 39 H 0.101 0.899 40 H 0.097 0.903 41 H 0.182 0.818 42 H 0.145 0.855 43 H 0.388 0.612 44 H -0.284 1.284 45 H -0.294 1.294 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.695 -1.381 1.389 4.182 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.061 4.061 2 N -0.053 5.053 3 N -0.102 5.102 4 C -0.199 4.199 5 C 0.389 3.611 6 O -0.440 6.440 7 N -0.356 5.356 8 C 0.022 3.978 9 C -0.044 4.044 10 C -0.071 4.071 11 C -0.138 4.138 12 C -0.147 4.147 13 C -0.151 4.151 14 C -0.143 4.143 15 C -0.141 4.141 16 C -0.185 4.185 17 C 0.021 3.979 18 H 0.145 0.855 19 F -0.204 7.204 20 C -0.174 4.174 21 C -0.214 4.214 22 C -0.138 4.138 23 C -0.154 4.154 24 O -0.345 6.345 25 Si 0.685 3.315 26 H 0.119 0.881 27 H 0.135 0.865 28 H 0.119 0.881 29 H 0.248 0.752 30 H 0.102 0.898 31 H 0.094 0.906 32 H 0.148 0.852 33 H 0.150 0.850 34 H 0.150 0.850 35 H 0.153 0.847 36 H 0.151 0.849 37 H 0.118 0.882 38 H 0.110 0.890 39 H 0.119 0.881 40 H 0.116 0.884 41 H 0.199 0.801 42 H 0.163 0.837 43 H 0.238 0.762 44 H -0.211 1.211 45 H -0.220 1.220 Dipole moment (debyes) X Y Z Total from point charges -3.783 -1.462 1.281 4.253 hybrid contribution -0.838 0.264 -0.609 1.069 sum -4.621 -1.198 0.672 4.821 Atomic orbital electron populations 1.22606 0.70803 1.06672 1.06033 1.45684 1.08954 1.01904 1.48786 1.73471 1.02760 1.14729 1.19286 1.21816 0.90903 0.94534 1.12687 1.16993 0.86450 0.81897 0.75755 1.90791 1.23620 1.77699 1.51883 1.45686 1.11202 1.04748 1.73920 1.21234 0.87882 0.85387 1.03280 1.20639 0.96640 0.93748 0.93377 1.19483 0.93643 1.00395 0.93625 1.21164 1.00573 0.99962 0.92132 1.21405 0.94096 0.99737 0.99451 1.21445 0.95547 1.00029 0.98057 1.21393 1.00704 0.99508 0.92682 1.21211 0.92883 1.00409 0.99580 1.23777 0.96764 1.01908 0.96062 1.23365 0.99386 0.81098 0.94030 0.85454 1.92785 1.97450 1.43540 1.86663 1.23625 0.99696 0.99338 0.94737 1.21719 0.97464 0.93440 1.08802 1.22180 0.90988 0.92084 1.08584 1.24848 0.93427 0.92052 1.05117 1.86583 1.29283 1.88561 1.30053 0.93232 0.83962 0.74784 0.79522 0.88103 0.86543 0.88112 0.75167 0.89817 0.90583 0.85248 0.84987 0.85014 0.84739 0.84924 0.88206 0.88987 0.88084 0.88444 0.80074 0.83743 0.76202 1.21064 1.22030 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 -0.53 10.12 127.77 1.29 0.77 16 2 N -0.26 -0.05 3.70 -355.92 -1.32 -1.37 16 3 N -0.26 -1.13 11.67 -48.18 -0.56 -1.69 16 4 C -0.04 -0.27 7.13 42.46 0.30 0.03 16 5 C 0.60 4.87 7.82 86.75 0.68 5.55 16 6 O -0.56 -7.68 16.92 -3.93 -0.07 -7.75 16 7 N -0.70 -1.81 5.28 -466.11 -2.46 -4.27 16 8 C 0.15 -0.05 4.97 86.38 0.43 0.38 16 9 C -0.04 0.12 0.70 -52.34 -0.04 0.08 16 10 C -0.07 0.02 4.26 -19.87 -0.08 -0.06 16 11 C -0.12 -0.09 9.39 22.27 0.21 0.12 16 12 C -0.13 -0.14 10.05 22.27 0.22 0.09 16 13 C -0.13 -0.10 10.05 22.27 0.22 0.12 16 14 C -0.12 -0.01 10.05 22.27 0.22 0.21 16 15 C -0.12 0.06 8.25 22.27 0.18 0.24 16 16 C -0.15 0.45 6.11 31.18 0.19 0.64 16 17 C 0.06 -0.10 5.32 31.12 0.17 0.07 16 18 H 0.13 -0.63 7.62 -2.39 -0.02 -0.65 16 19 F -0.22 -1.16 17.41 44.97 0.78 -0.38 16 20 C -0.14 0.43 6.78 31.12 0.21 0.64 16 21 C -0.19 -0.57 9.35 22.41 0.21 -0.36 16 22 C -0.01 0.01 6.18 41.40 0.26 0.26 16 23 C -0.04 0.21 2.87 71.24 0.20 0.42 16 24 O -0.54 2.65 10.40 -148.98 -1.55 1.10 16 25 Si 0.78 -3.01 31.22 68.60 2.14 -0.87 16 26 H 0.10 -0.99 8.14 -2.39 -0.02 -1.01 16 27 H 0.12 -0.95 6.77 -2.38 -0.02 -0.97 16 28 H 0.10 -0.79 8.14 -2.39 -0.02 -0.81 16 29 H 0.41 0.38 7.11 -92.71 -0.66 -0.27 16 30 H 0.08 -0.12 7.32 -2.39 -0.02 -0.14 16 31 H 0.08 0.10 8.13 -2.39 -0.02 0.08 16 32 H 0.13 -0.20 8.04 -2.91 -0.02 -0.22 16 33 H 0.13 -0.23 8.06 -2.91 -0.02 -0.26 16 34 H 0.13 -0.30 8.06 -2.91 -0.02 -0.32 16 35 H 0.13 -0.43 8.06 -2.91 -0.02 -0.46 16 36 H 0.13 -0.44 7.02 -2.91 -0.02 -0.46 16 37 H 0.10 -0.22 7.43 -2.39 -0.02 -0.24 16 38 H 0.09 -0.40 8.10 -2.39 -0.02 -0.41 16 39 H 0.10 -0.56 8.10 -2.39 -0.02 -0.58 16 40 H 0.10 -0.15 8.09 -2.39 -0.02 -0.17 16 41 H 0.18 -0.05 7.01 -2.91 -0.02 -0.07 16 42 H 0.15 -1.09 7.96 -2.38 -0.02 -1.11 16 43 H 0.39 -3.62 8.70 -74.06 -0.64 -4.26 16 44 H -0.28 -0.57 7.11 99.48 0.71 0.14 16 45 H -0.29 -0.75 7.11 99.48 0.71 -0.04 16 Total: 0.00 -19.90 378.08 1.63 -18.28 By element: Atomic # 1 Polarization: -12.02 SS G_CDS: -0.23 Total: -12.25 kcal Atomic # 6 Polarization: 4.31 SS G_CDS: 4.88 Total: 9.20 kcal Atomic # 7 Polarization: -2.99 SS G_CDS: -4.34 Total: -7.33 kcal Atomic # 8 Polarization: -5.03 SS G_CDS: -1.62 Total: -6.64 kcal Atomic # 9 Polarization: -1.16 SS G_CDS: 0.78 Total: -0.38 kcal Atomic # 14 Polarization: -3.01 SS G_CDS: 2.14 Total: -0.87 kcal Total: -19.90 1.63 -18.28 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_13458982_13259642.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 40.437 kcal (2) G-P(sol) polarization free energy of solvation -19.902 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 20.534 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.625 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.277 kcal (6) G-S(sol) free energy of system = (1) + (5) 22.160 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.09 seconds