Wall clock time and date at job start Thu Mar 4 2021 16:48:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86301 * 109.46974 * 2 1 4 4 C 1.50701 * 109.47417 * 120.00123 * 2 1 3 5 5 C 1.35008 * 126.42759 * 210.02670 * 4 2 1 6 6 N 1.33583 * 108.65097 * 179.97438 * 5 4 2 7 7 C 1.32410 * 109.22657 * 0.02562 * 6 5 4 8 8 C 1.41260 * 132.11770 * 179.97438 * 7 6 5 9 9 Br 1.89101 * 120.25193 * 359.97271 * 8 7 6 10 10 C 1.35703 * 119.48882 * 179.97438 * 8 7 6 11 11 C 1.41755 * 119.53513 * 359.97438 * 10 8 7 12 12 C 1.47578 * 120.01175 * 179.97438 * 11 10 8 13 13 O 1.21593 * 120.00047 * 180.02562 * 12 11 10 14 14 N 1.34771 * 119.99688 * 359.97438 * 12 11 10 15 15 C 1.46507 * 120.00029 * 179.97438 * 14 12 11 16 16 H 1.08998 * 109.47054 * 35.00169 * 15 14 12 17 17 C 1.52997 * 109.47144 * 155.00389 * 15 14 12 18 18 C 1.53000 * 109.47148 * 180.02562 * 17 15 14 19 19 C 1.53000 * 109.46807 * 300.00311 * 18 17 15 20 20 H 1.09001 * 109.47421 * 299.99397 * 19 18 17 21 21 C 1.53000 * 109.46807 * 179.97438 * 19 18 17 22 22 C 1.53003 * 109.47041 * 174.99435 * 21 19 18 23 23 O 1.42902 * 109.47189 * 179.97438 * 22 21 19 24 24 C 1.52997 * 109.47521 * 59.99918 * 19 18 17 25 25 C 1.52997 * 109.46797 * 299.99828 * 24 19 18 26 26 C 1.36500 * 119.97969 * 0.02562 * 11 10 8 27 27 N 1.35951 * 120.50672 * 359.72647 * 26 11 10 28 28 H 0.96708 * 114.00101 * 299.99304 * 1 2 3 29 29 H 1.09002 * 109.46984 * 240.00143 * 2 1 3 30 30 H 1.48494 * 109.99914 * 178.67998 * 3 2 1 31 31 H 1.48493 * 110.00101 * 300.00094 * 3 2 1 32 32 H 1.07990 * 125.67407 * 0.02562 * 5 4 2 33 33 H 1.08000 * 120.22820 * 179.97438 * 10 8 7 34 34 H 0.97006 * 120.00310 * 0.02562 * 14 12 11 35 35 H 1.08998 * 109.47187 * 299.99957 * 17 15 14 36 36 H 1.08998 * 109.47324 * 59.99946 * 17 15 14 37 37 H 1.08998 * 109.47192 * 59.99694 * 18 17 15 38 38 H 1.08990 * 109.47445 * 179.97438 * 18 17 15 39 39 H 1.09003 * 109.47600 * 294.99664 * 21 19 18 40 40 H 1.08997 * 109.47391 * 54.99534 * 21 19 18 41 41 H 1.08999 * 109.47459 * 300.00209 * 22 21 19 42 42 H 1.09007 * 109.47112 * 60.00364 * 22 21 19 43 43 H 0.96701 * 114.00475 * 180.02562 * 23 22 21 44 44 H 1.08998 * 109.47324 * 60.00099 * 24 19 18 45 45 H 1.08998 * 109.47187 * 180.02562 * 24 19 18 46 46 H 1.09005 * 109.47289 * 299.99896 * 25 24 19 47 47 H 1.09000 * 109.47096 * 179.97438 * 25 24 19 48 48 H 1.08004 * 119.74811 * 180.02562 * 26 11 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 3.0853 -0.4608 1.8853 6 7 3.1762 -1.2957 2.9241 7 6 2.1070 -2.0763 2.9510 8 6 1.7129 -3.1132 3.8255 9 35 2.8135 -3.5990 5.2845 10 6 0.5383 -3.7581 3.6106 11 6 -0.2751 -3.3811 2.5125 12 6 -1.5541 -4.0756 2.2686 13 8 -2.2514 -3.7524 1.3264 14 7 -1.9488 -5.0688 3.0896 15 6 -3.2188 -5.7580 2.8479 16 1 -3.3926 -5.8335 1.7745 17 6 -3.1614 -7.1611 3.4552 18 6 -4.4875 -7.8811 3.2022 19 6 -5.6276 -7.0917 3.8486 20 1 -5.4544 -7.0162 4.9221 21 6 -6.9538 -7.8113 3.5951 22 6 -8.0763 -7.0913 4.3451 23 8 -9.3151 -7.7631 4.1079 24 6 -5.6851 -5.6886 3.2413 25 6 -4.3590 -4.9688 3.4943 26 6 0.1256 -2.3761 1.6802 27 7 1.2998 -1.7264 1.8981 28 1 -0.3934 0.4416 0.7652 29 1 1.7923 -0.5138 -0.8900 30 1 3.5345 1.7703 0.0321 31 1 1.5614 2.4679 -1.2084 32 1 3.8133 0.2895 1.6148 33 1 0.2255 -4.5529 4.2715 34 1 -1.3923 -5.3270 3.8411 35 1 -2.3493 -7.7235 2.9944 36 1 -2.9875 -7.0856 4.5286 37 1 -4.6609 -7.9566 2.1288 38 1 -4.4464 -8.8807 3.6345 39 1 -7.1705 -7.8083 2.5268 40 1 -6.8824 -8.8400 3.9483 41 1 -7.8597 -7.0944 5.4134 42 1 -8.1478 -6.0626 3.9918 43 1 -10.0728 -7.3600 4.5534 44 1 -5.8585 -5.7642 2.1678 45 1 -6.4971 -5.1262 3.7021 46 1 -4.1856 -4.8932 4.5679 47 1 -4.3997 -3.9693 3.0613 48 1 -0.4972 -2.0916 0.8450 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_13461142_12335884.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 16:48:07 Heat of formation + Delta-G solvation = -34.011387 kcal Electronic energy + Delta-G solvation = -32306.468947 eV Core-core repulsion = 27795.922136 eV Total energy + Delta-G solvation = -4510.546811 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 424.083 amu Computer time = 1.22 seconds Orbital eigenvalues (eV) -44.28968 -41.43364 -39.82751 -38.49717 -38.03469 -37.72416 -35.92106 -35.24052 -33.24206 -32.22766 -31.81021 -31.69107 -30.26739 -28.58591 -26.90693 -25.70974 -24.25610 -24.10704 -23.54625 -22.57369 -21.86281 -21.67452 -20.84191 -19.49833 -18.78300 -18.31009 -18.20822 -17.79398 -17.52227 -17.08347 -16.55115 -16.28355 -16.11001 -16.02918 -15.78927 -15.66195 -15.33183 -15.16989 -15.01991 -14.90772 -14.71024 -14.59900 -14.07092 -13.68560 -13.52896 -13.38288 -13.36350 -13.11784 -13.06140 -12.87139 -12.69572 -12.17530 -12.16017 -12.07382 -11.94546 -11.76534 -11.52471 -11.36775 -11.35827 -11.30174 -11.20298 -11.08409 -10.90494 -10.80110 -10.23065 -10.01214 -9.10544 -4.96512 -0.91436 -0.38858 0.18572 0.95873 1.09939 1.40641 1.65188 1.77576 1.91279 2.01247 2.22788 2.78860 3.05557 3.16039 3.29130 3.36917 3.45328 3.46335 3.65597 3.75046 3.82779 3.95442 4.03488 4.11984 4.19657 4.22931 4.29368 4.32781 4.37254 4.40532 4.45931 4.48947 4.54504 4.58201 4.59855 4.63394 4.79424 4.94148 4.95365 5.05133 5.11142 5.18347 5.18851 5.22268 5.24746 5.25992 5.38751 5.43214 5.54769 5.57094 6.33515 6.40579 6.49226 6.87461 6.99489 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.553 6.553 2 C -0.044 4.044 3 Si 0.805 3.195 4 C -0.081 4.081 5 C 0.035 3.965 6 N -0.493 5.493 7 C 0.227 3.773 8 C -0.080 4.080 9 Br 0.006 6.994 10 C -0.022 4.022 11 C -0.168 4.168 12 C 0.578 3.422 13 O -0.565 6.565 14 N -0.703 5.703 15 C 0.146 3.854 16 H 0.069 0.931 17 C -0.120 4.120 18 C -0.110 4.110 19 C -0.078 4.078 20 H 0.086 0.914 21 C -0.116 4.116 22 C 0.069 3.931 23 O -0.603 6.603 24 C -0.113 4.113 25 C -0.124 4.124 26 C 0.159 3.841 27 N -0.356 5.356 28 H 0.396 0.604 29 H 0.120 0.880 30 H -0.266 1.266 31 H -0.287 1.287 32 H 0.208 0.792 33 H 0.186 0.814 34 H 0.415 0.585 35 H 0.077 0.923 36 H 0.089 0.911 37 H 0.058 0.942 38 H 0.078 0.922 39 H 0.057 0.943 40 H 0.065 0.935 41 H 0.056 0.944 42 H 0.054 0.946 43 H 0.396 0.604 44 H 0.054 0.946 45 H 0.071 0.929 46 H 0.080 0.920 47 H 0.049 0.951 48 H 0.193 0.807 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.127 0.376 4.735 5.204 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.361 6.361 2 C -0.153 4.153 3 Si 0.706 3.294 4 C -0.192 4.192 5 C -0.114 4.114 6 N -0.212 5.212 7 C -0.019 4.019 8 C -0.163 4.163 9 Br 0.091 6.909 10 C -0.048 4.048 11 C -0.175 4.175 12 C 0.364 3.636 13 O -0.445 6.445 14 N -0.354 5.354 15 C 0.042 3.958 16 H 0.088 0.912 17 C -0.157 4.157 18 C -0.149 4.149 19 C -0.096 4.096 20 H 0.105 0.895 21 C -0.154 4.154 22 C -0.009 4.009 23 O -0.411 6.411 24 C -0.151 4.151 25 C -0.162 4.162 26 C 0.033 3.967 27 N -0.029 5.029 28 H 0.246 0.754 29 H 0.137 0.863 30 H -0.192 1.192 31 H -0.214 1.214 32 H 0.224 0.776 33 H 0.203 0.797 34 H 0.254 0.746 35 H 0.095 0.905 36 H 0.108 0.892 37 H 0.077 0.923 38 H 0.097 0.903 39 H 0.075 0.925 40 H 0.084 0.916 41 H 0.074 0.926 42 H 0.072 0.928 43 H 0.246 0.754 44 H 0.073 0.927 45 H 0.090 0.910 46 H 0.099 0.901 47 H 0.068 0.932 48 H 0.210 0.790 Dipole moment (debyes) X Y Z Total from point charges -0.580 0.342 3.814 3.873 hybrid contribution -0.855 -0.211 -0.678 1.111 sum -1.435 0.131 3.136 3.451 Atomic orbital electron populations 1.86487 1.17131 1.81744 1.50704 1.25179 0.85158 1.11487 0.93497 0.93070 0.78616 0.72634 0.85106 1.22354 0.97896 0.96654 1.02323 1.22844 0.96616 1.00242 0.91698 1.70823 1.20101 1.08052 1.22249 1.20717 0.89750 0.99767 0.91625 1.20567 0.98494 0.99266 0.97949 1.96843 1.66739 1.90515 1.36805 1.21362 0.90071 0.97934 0.95456 1.19275 0.98256 1.00938 0.99073 1.17569 0.83938 0.79977 0.82085 1.90851 1.56144 1.65995 1.31492 1.45829 1.23326 1.35223 1.31034 1.21083 0.82040 0.92162 1.00472 0.91242 1.21776 0.98497 0.92960 1.02509 1.21512 0.93131 0.99167 1.01041 1.21082 0.93274 0.94135 1.01112 0.89549 1.21560 0.93460 0.99856 1.00516 1.22382 0.83802 0.95431 0.99238 1.86430 1.19181 1.58850 1.76657 1.21605 0.96914 0.95645 1.00928 1.21863 0.94254 0.98499 1.01626 1.22250 0.85112 0.90365 0.98958 1.42704 1.15015 1.24065 1.21111 0.75437 0.86318 1.19175 1.21381 0.77551 0.79679 0.74647 0.90474 0.89198 0.92318 0.90338 0.92451 0.91600 0.92590 0.92809 0.75449 0.92686 0.91005 0.90107 0.93189 0.79047 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 1.14 10.90 -148.98 -1.62 -0.48 16 2 C -0.04 0.11 3.06 71.24 0.22 0.33 16 3 Si 0.81 -4.32 31.34 68.60 2.15 -2.17 16 4 C -0.08 -0.08 6.24 41.01 0.26 0.17 16 5 C 0.04 0.09 10.44 83.68 0.87 0.97 16 6 N -0.49 -3.89 11.30 -194.11 -2.19 -6.08 16 7 C 0.23 1.31 7.59 134.19 1.02 2.32 16 8 C -0.08 -0.16 6.24 22.43 0.14 -0.02 16 9 Br 0.01 0.01 33.72 -20.37 -0.69 -0.68 16 10 C -0.02 0.07 9.26 22.55 0.21 0.28 16 11 C -0.17 0.10 5.84 -20.35 -0.12 -0.02 16 12 C 0.58 0.59 7.73 86.71 0.67 1.26 16 13 O -0.56 -5.03 15.94 -4.01 -0.06 -5.10 16 14 N -0.70 3.50 5.03 -445.66 -2.24 1.26 16 15 C 0.15 -0.55 2.45 44.99 0.11 -0.44 16 16 H 0.07 0.11 7.58 -2.39 -0.02 0.09 16 17 C -0.12 0.94 5.39 30.59 0.16 1.10 16 18 C -0.11 0.65 5.20 30.59 0.16 0.81 16 19 C -0.08 0.42 2.19 -10.79 -0.02 0.39 16 20 H 0.09 -0.62 8.14 -2.39 -0.02 -0.64 16 21 C -0.12 0.20 5.05 30.60 0.15 0.36 16 22 C 0.07 -0.13 6.80 71.98 0.49 0.36 16 23 O -0.60 -1.18 13.66 -148.98 -2.04 -3.22 16 24 C -0.11 0.42 4.96 30.59 0.15 0.57 16 25 C -0.12 0.44 5.50 30.59 0.17 0.61 16 26 C 0.16 0.24 9.91 83.65 0.83 1.07 16 27 N -0.36 -1.08 2.93 -337.70 -0.99 -2.07 16 28 H 0.40 -3.52 8.70 -74.05 -0.64 -4.16 16 29 H 0.12 -0.23 7.96 -2.39 -0.02 -0.25 16 30 H -0.27 0.62 6.80 99.48 0.68 1.29 16 31 H -0.29 -0.43 7.11 99.48 0.71 0.28 16 32 H 0.21 -0.51 6.69 -2.92 -0.02 -0.53 16 33 H 0.19 -1.99 6.44 -2.91 -0.02 -2.01 16 34 H 0.42 -4.62 6.64 -92.70 -0.62 -5.23 16 35 H 0.08 -0.62 8.14 -2.39 -0.02 -0.64 16 36 H 0.09 -0.98 8.14 -2.39 -0.02 -1.00 16 37 H 0.06 -0.21 8.14 -2.39 -0.02 -0.23 16 38 H 0.08 -0.53 8.14 -2.39 -0.02 -0.55 16 39 H 0.06 0.06 8.14 -2.39 -0.02 0.04 16 40 H 0.07 -0.04 8.14 -2.39 -0.02 -0.06 16 41 H 0.06 -0.24 8.14 -2.39 -0.02 -0.26 16 42 H 0.05 -0.18 6.57 -2.38 -0.02 -0.20 16 43 H 0.40 -2.59 9.12 -74.06 -0.68 -3.26 16 44 H 0.05 -0.04 8.14 -2.39 -0.02 -0.06 16 45 H 0.07 -0.31 6.56 -2.39 -0.02 -0.32 16 46 H 0.08 -0.50 8.14 -2.38 -0.02 -0.52 16 47 H 0.05 0.05 8.14 -2.39 -0.02 0.04 16 48 H 0.19 0.37 6.19 -2.91 -0.02 0.35 16 Total: 0.00 -23.14 404.59 -3.11 -26.25 By element: Atomic # 1 Polarization: -16.95 SS G_CDS: -0.89 Total: -17.84 kcal Atomic # 6 Polarization: 4.66 SS G_CDS: 5.47 Total: 10.13 kcal Atomic # 7 Polarization: -1.47 SS G_CDS: -5.43 Total: -6.89 kcal Atomic # 8 Polarization: -5.07 SS G_CDS: -3.72 Total: -8.79 kcal Atomic # 14 Polarization: -4.32 SS G_CDS: 2.15 Total: -2.17 kcal Atomic # 35 Polarization: 0.01 SS G_CDS: -0.69 Total: -0.68 kcal Total: -23.14 -3.11 -26.25 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_13461142_12335884.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -7.766 kcal (2) G-P(sol) polarization free energy of solvation -23.139 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -30.905 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.106 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.246 kcal (6) G-S(sol) free energy of system = (1) + (5) -34.011 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.22 seconds