Wall clock time and date at job start Thu Mar 4 2021 16:48:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46501 * 1 3 3 N 1.28469 * 124.88204 * 2 1 4 4 C 1.31808 * 110.07045 * 180.19687 * 3 2 1 5 5 C 1.47712 * 126.51680 * 179.82119 * 4 3 2 6 6 O 1.21572 * 119.99760 * 179.69586 * 5 4 3 7 7 N 1.34770 * 120.00094 * 359.69107 * 5 4 3 8 8 C 1.46500 * 120.00256 * 180.02562 * 7 5 4 9 9 H 1.08998 * 109.46845 * 325.00694 * 8 7 5 10 10 C 1.53006 * 109.47249 * 84.99846 * 8 7 5 11 11 C 1.52997 * 109.47164 * 180.02562 * 10 8 7 12 12 C 1.53002 * 109.46978 * 299.99874 * 11 10 8 13 13 H 1.08992 * 109.47056 * 300.00064 * 12 11 10 14 14 C 1.52997 * 109.46978 * 180.02562 * 12 11 10 15 15 C 1.53002 * 109.47192 * 65.00120 * 14 12 11 16 16 O 1.42898 * 109.47425 * 179.97438 * 15 14 12 17 17 C 1.52996 * 109.46891 * 60.00410 * 12 11 10 18 18 C 1.52997 * 109.47473 * 205.00145 * 8 7 5 19 19 C 1.41507 * 106.96418 * 359.56375 * 4 3 2 20 20 C 1.35032 * 124.88278 * 179.70973 * 2 1 3 21 21 C 1.50695 * 126.38909 * 359.96112 * 20 2 1 22 22 O 1.42903 * 109.47162 * 29.99988 * 21 20 2 23 23 Si 1.86298 * 109.47418 * 150.00143 * 21 20 2 24 24 H 1.08998 * 109.47817 * 270.28684 * 1 2 3 25 25 H 1.09000 * 109.47063 * 30.28999 * 1 2 3 26 26 H 1.09005 * 109.46747 * 150.28649 * 1 2 3 27 27 H 0.97005 * 120.00370 * 0.02562 * 7 5 4 28 28 H 1.09001 * 109.47002 * 60.00085 * 10 8 7 29 29 H 1.09000 * 109.47050 * 300.00351 * 10 8 7 30 30 H 1.09002 * 109.47045 * 180.02562 * 11 10 8 31 31 H 1.09001 * 109.47375 * 59.99966 * 11 10 8 32 32 H 1.08994 * 109.47445 * 185.00212 * 14 12 11 33 33 H 1.09000 * 109.47459 * 305.00519 * 14 12 11 34 34 H 1.09002 * 109.47375 * 299.99853 * 15 14 12 35 35 H 1.09002 * 109.47097 * 59.99849 * 15 14 12 36 36 H 0.96695 * 114.00318 * 180.02562 * 16 15 14 37 37 H 1.09004 * 109.47368 * 179.97438 * 17 12 11 38 38 H 1.09001 * 109.47372 * 59.99964 * 17 12 11 39 39 H 1.09002 * 109.47153 * 59.99757 * 18 8 7 40 40 H 1.09001 * 109.46832 * 299.99948 * 18 8 7 41 41 H 1.07997 * 127.24668 * 180.26114 * 19 4 3 42 42 H 1.09007 * 109.47254 * 270.00064 * 21 20 2 43 43 H 0.96703 * 113.99663 * 180.02562 * 22 21 20 44 44 H 1.48500 * 110.00336 * 178.68240 * 23 21 20 45 45 H 1.48504 * 109.99988 * 299.99969 * 23 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 7 2.1997 1.0539 0.0000 4 6 3.4740 0.7169 -0.0043 5 6 4.6272 1.6399 -0.0094 6 8 5.7597 1.1977 -0.0074 7 7 4.4240 2.9722 -0.0164 8 6 5.5678 3.8876 -0.0220 9 1 6.3779 3.4605 0.5690 10 6 6.0436 4.1005 -1.4606 11 6 7.2384 5.0561 -1.4664 12 6 6.8206 6.3988 -0.8635 13 1 6.0107 6.8261 -1.4545 14 6 8.0153 7.3545 -0.8699 15 6 8.4120 7.6654 -2.3145 16 8 9.5274 8.5586 -2.3206 17 6 6.3449 6.1859 0.5750 18 6 5.1495 5.2302 0.5808 19 6 3.5272 -0.6971 0.0031 20 6 2.2373 -1.1077 0.0056 21 6 1.7534 -2.5348 0.0137 22 8 0.4951 -2.6150 -0.6589 23 14 2.9941 -3.6162 -0.8593 24 1 -0.3635 0.0051 1.0276 25 1 -0.3633 0.8874 -0.5183 26 1 -0.3633 -0.8926 -0.5094 27 1 3.5204 3.3251 -0.0176 28 1 5.2335 4.5275 -2.0517 29 1 6.3416 3.1440 -1.8900 30 1 7.5771 5.2080 -2.4913 31 1 8.0484 4.6286 -0.8753 32 1 7.7437 8.2791 -0.3607 33 1 8.8556 6.8893 -0.3546 34 1 8.6837 6.7408 -2.8238 35 1 7.5717 8.1307 -2.8299 36 1 9.8333 8.7999 -3.2056 37 1 6.0477 7.1425 1.0048 38 1 7.1549 5.7585 1.1661 39 1 4.8106 5.0786 1.6056 40 1 4.3394 5.6573 -0.0104 41 1 4.4108 -1.3180 0.0062 42 1 1.6373 -2.8733 1.0433 43 1 0.1228 -3.5069 -0.6916 44 1 2.5440 -5.0310 -0.8305 45 1 3.1614 -3.1650 -2.2642 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_13461142_13259642.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 16:48:11 Heat of formation + Delta-G solvation = -55.300544 kcal Electronic energy + Delta-G solvation = -25806.199842 eV Core-core repulsion = 22019.226289 eV Total energy + Delta-G solvation = -3786.973554 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 310.173 amu Computer time = 0.83 seconds Orbital eigenvalues (eV) -43.82548 -41.02117 -39.51948 -38.10749 -37.75158 -35.72463 -34.44289 -33.05473 -32.42122 -31.78223 -29.08636 -28.04951 -26.69629 -24.84856 -24.04241 -23.26597 -22.14299 -21.69900 -21.12942 -20.47169 -18.72266 -18.51030 -18.29213 -17.55799 -17.38959 -17.21986 -16.47827 -16.13787 -15.88887 -15.67612 -15.32039 -15.14524 -14.95296 -14.81490 -14.79281 -14.57695 -14.11041 -13.69085 -13.62435 -13.44336 -13.35664 -13.13429 -12.91535 -12.85779 -12.42120 -12.17729 -12.09959 -11.96976 -11.85215 -11.75767 -11.36267 -11.21434 -11.09483 -10.99744 -10.80073 -10.28090 -9.99228 -9.88135 -4.89153 0.43335 0.79806 1.25867 1.53596 1.64901 1.97284 2.10111 2.30011 2.93111 3.24830 3.30537 3.50979 3.64195 3.73471 3.91995 4.02162 4.08483 4.18927 4.28356 4.29258 4.35398 4.36489 4.36933 4.42126 4.49362 4.52307 4.56692 4.58740 4.61758 4.65661 4.79468 4.83098 4.94239 5.03940 5.08320 5.16486 5.18077 5.20522 5.24027 5.25545 5.39692 5.45624 5.55383 5.68087 6.38248 6.49415 6.82160 6.87310 7.11887 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.071 3.929 2 N -0.265 5.265 3 N -0.269 5.269 4 C -0.039 4.039 5 C 0.604 3.396 6 O -0.564 6.564 7 N -0.705 5.705 8 C 0.145 3.855 9 H 0.072 0.928 10 C -0.124 4.124 11 C -0.111 4.111 12 C -0.078 4.078 13 H 0.083 0.917 14 C -0.115 4.115 15 C 0.069 3.931 16 O -0.601 6.601 17 C -0.108 4.108 18 C -0.118 4.118 19 C -0.192 4.192 20 C 0.025 3.975 21 C -0.046 4.046 22 O -0.553 6.553 23 Si 0.775 3.225 24 H 0.097 0.903 25 H 0.098 0.902 26 H 0.128 0.872 27 H 0.413 0.587 28 H 0.073 0.927 29 H 0.047 0.953 30 H 0.072 0.928 31 H 0.059 0.941 32 H 0.067 0.933 33 H 0.060 0.940 34 H 0.054 0.946 35 H 0.054 0.946 36 H 0.396 0.604 37 H 0.080 0.920 38 H 0.062 0.938 39 H 0.074 0.926 40 H 0.082 0.918 41 H 0.183 0.817 42 H 0.117 0.883 43 H 0.406 0.594 44 H -0.264 1.264 45 H -0.311 1.311 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.505 -1.733 0.797 5.826 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 N -0.054 5.054 3 N -0.107 5.107 4 C -0.198 4.198 5 C 0.390 3.610 6 O -0.441 6.441 7 N -0.355 5.355 8 C 0.041 3.959 9 H 0.090 0.910 10 C -0.163 4.163 11 C -0.149 4.149 12 C -0.097 4.097 13 H 0.101 0.899 14 C -0.152 4.152 15 C -0.008 4.008 16 O -0.410 6.410 17 C -0.146 4.146 18 C -0.156 4.156 19 C -0.220 4.220 20 C -0.101 4.101 21 C -0.156 4.156 22 O -0.365 6.365 23 Si 0.678 3.322 24 H 0.115 0.885 25 H 0.117 0.883 26 H 0.146 0.854 27 H 0.250 0.750 28 H 0.091 0.909 29 H 0.065 0.935 30 H 0.091 0.909 31 H 0.078 0.922 32 H 0.085 0.915 33 H 0.078 0.922 34 H 0.072 0.928 35 H 0.073 0.927 36 H 0.246 0.754 37 H 0.098 0.902 38 H 0.081 0.919 39 H 0.093 0.907 40 H 0.100 0.900 41 H 0.200 0.800 42 H 0.135 0.865 43 H 0.260 0.740 44 H -0.190 1.190 45 H -0.239 1.239 Dipole moment (debyes) X Y Z Total from point charges -5.399 -1.092 0.738 5.557 hybrid contribution -0.924 -0.792 -0.884 1.504 sum -6.323 -1.884 -0.146 6.599 Atomic orbital electron populations 1.22788 0.70877 1.07277 1.05815 1.45687 1.09068 1.01966 1.48649 1.73441 1.02773 1.14842 1.19607 1.21828 0.90924 0.94437 1.12560 1.17022 0.86298 0.82189 0.75536 1.90779 1.23716 1.77746 1.51905 1.45899 1.11206 1.04714 1.73722 1.21101 0.88076 0.89675 0.97033 0.91005 1.21860 0.98889 0.99338 0.96172 1.21602 0.97113 0.94564 1.01606 1.21076 0.97112 0.94398 0.97066 0.89903 1.21538 0.98114 0.99664 0.95905 1.22368 0.88203 0.92549 0.97719 1.86425 1.51009 1.67810 1.35731 1.21516 0.97293 0.99661 0.96156 1.21759 0.99209 0.92897 1.01700 1.21647 0.97145 0.93638 1.09591 1.21181 0.90669 0.90410 1.07798 1.24445 0.93460 0.93930 1.03760 1.86339 1.33944 1.36636 1.79603 0.93348 0.85059 0.74868 0.78939 0.88459 0.88348 0.85436 0.75036 0.90869 0.93451 0.90921 0.92250 0.91451 0.92150 0.92815 0.92736 0.75447 0.90172 0.91895 0.90721 0.89972 0.79960 0.86530 0.74046 1.18958 1.23879 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.07 -0.24 11.00 127.77 1.41 1.17 16 2 N -0.26 -1.01 3.70 -355.93 -1.32 -2.33 16 3 N -0.27 -1.92 11.67 -48.17 -0.56 -2.48 16 4 C -0.04 -0.36 7.13 42.46 0.30 -0.05 16 5 C 0.60 6.32 7.79 86.75 0.68 7.00 16 6 O -0.56 -9.24 16.59 -3.94 -0.07 -9.31 16 7 N -0.70 -3.19 5.07 -445.54 -2.26 -5.45 16 8 C 0.15 0.39 2.45 44.99 0.11 0.50 16 9 H 0.07 0.50 7.58 -2.39 -0.02 0.48 16 10 C -0.12 -0.29 5.49 30.60 0.17 -0.12 16 11 C -0.11 -0.01 4.96 30.59 0.15 0.14 16 12 C -0.08 0.16 2.19 -10.80 -0.02 0.13 16 13 H 0.08 -0.28 8.14 -2.39 -0.02 -0.30 16 14 C -0.11 -0.04 5.05 30.59 0.15 0.11 16 15 C 0.07 0.00 6.80 71.98 0.49 0.49 16 16 O -0.60 -2.03 13.66 -148.98 -2.03 -4.07 16 17 C -0.11 0.26 5.21 30.61 0.16 0.42 16 18 C -0.12 0.26 5.39 30.61 0.17 0.43 16 19 C -0.19 -1.11 9.35 22.41 0.21 -0.91 16 20 C 0.02 0.07 6.21 41.40 0.26 0.33 16 21 C -0.05 0.20 2.98 71.23 0.21 0.41 16 22 O -0.55 3.01 9.76 -148.98 -1.45 1.56 16 23 Si 0.77 -2.62 31.24 68.60 2.14 -0.47 16 24 H 0.10 -0.62 8.14 -2.39 -0.02 -0.64 16 25 H 0.10 -0.46 8.14 -2.39 -0.02 -0.48 16 26 H 0.13 -0.59 5.19 -2.38 -0.01 -0.60 16 27 H 0.41 0.52 8.33 -92.70 -0.77 -0.25 16 28 H 0.07 0.04 8.14 -2.39 -0.02 0.03 16 29 H 0.05 0.34 8.14 -2.39 -0.02 0.32 16 30 H 0.07 -0.07 6.56 -2.39 -0.02 -0.08 16 31 H 0.06 0.13 8.14 -2.39 -0.02 0.11 16 32 H 0.07 0.08 8.14 -2.39 -0.02 0.06 16 33 H 0.06 0.16 8.14 -2.39 -0.02 0.14 16 34 H 0.05 -0.07 6.56 -2.39 -0.02 -0.09 16 35 H 0.05 -0.12 8.14 -2.39 -0.02 -0.14 16 36 H 0.40 -2.06 9.12 -74.06 -0.68 -2.73 16 37 H 0.08 -0.30 8.14 -2.39 -0.02 -0.32 16 38 H 0.06 -0.05 8.14 -2.39 -0.02 -0.07 16 39 H 0.07 -0.17 8.14 -2.39 -0.02 -0.19 16 40 H 0.08 -0.35 8.14 -2.39 -0.02 -0.37 16 41 H 0.18 0.36 7.03 -2.91 -0.02 0.34 16 42 H 0.12 -1.10 7.96 -2.38 -0.02 -1.12 16 43 H 0.41 -5.56 8.74 -74.06 -0.65 -6.21 16 44 H -0.26 0.42 7.11 99.48 0.71 1.13 16 45 H -0.31 -2.12 7.11 99.48 0.71 -1.41 16 Total: 0.00 -22.76 360.83 -2.15 -24.91 By element: Atomic # 1 Polarization: -11.38 SS G_CDS: -1.03 Total: -12.41 kcal Atomic # 6 Polarization: 5.62 SS G_CDS: 4.44 Total: 10.06 kcal Atomic # 7 Polarization: -6.12 SS G_CDS: -4.14 Total: -10.26 kcal Atomic # 8 Polarization: -8.26 SS G_CDS: -3.56 Total: -11.81 kcal Atomic # 14 Polarization: -2.62 SS G_CDS: 2.14 Total: -0.47 kcal Total: -22.76 -2.15 -24.91 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_13461142_13259642.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -30.394 kcal (2) G-P(sol) polarization free energy of solvation -22.760 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -53.153 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.147 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.907 kcal (6) G-S(sol) free energy of system = (1) + (5) -55.301 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.83 seconds