Wall clock time and date at job start Thu Mar 4 2021 14:13:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86299 * 109.47323 * 2 1 4 4 C 1.50697 * 109.47091 * 239.99433 * 2 1 3 5 5 C 1.35009 * 126.42677 * 150.02635 * 4 2 1 6 6 N 1.33579 * 108.65615 * 180.02562 * 5 4 2 7 7 C 1.32414 * 109.22547 * 359.97438 * 6 5 4 8 8 C 1.41249 * 132.12471 * 180.28515 * 7 6 5 9 9 Br 1.89099 * 120.25170 * 0.02562 * 8 7 6 10 10 C 1.35703 * 119.49051 * 180.18088 * 8 7 6 11 11 C 1.41753 * 119.53543 * 359.51293 * 10 8 7 12 12 C 1.47586 * 120.01348 * 180.27186 * 11 10 8 13 13 O 1.21591 * 120.00098 * 179.97438 * 12 11 10 14 14 N 1.34773 * 119.99811 * 359.97438 * 12 11 10 15 15 C 1.46499 * 120.00129 * 179.97438 * 14 12 11 16 16 H 1.08997 * 109.47104 * 325.00123 * 15 14 12 17 17 C 1.53007 * 109.46838 * 85.00214 * 15 14 12 18 18 C 1.53000 * 109.46959 * 180.02562 * 17 15 14 19 19 C 1.52998 * 109.47246 * 300.00088 * 18 17 15 20 20 H 1.08997 * 109.46863 * 299.99896 * 19 18 17 21 21 C 1.50697 * 109.47155 * 180.02562 * 19 18 17 22 22 N 1.29909 * 124.85069 * 299.69469 * 21 19 18 23 23 C 1.36067 * 108.80046 * 179.83913 * 22 21 19 24 24 C 1.39544 * 133.81156 * 180.09435 * 23 22 21 25 25 C 1.37718 * 119.73030 * 180.35492 * 24 23 22 26 26 C 1.38680 * 120.42264 * 359.97438 * 25 24 23 27 27 C 1.37956 * 120.47502 * 0.02562 * 26 25 24 28 28 C 1.38621 * 119.87442 * 359.97438 * 27 26 25 29 29 O 1.34235 * 124.85128 * 119.99814 * 21 19 18 30 30 C 1.52999 * 109.47458 * 59.99683 * 19 18 17 31 31 C 1.53000 * 109.47151 * 300.00375 * 30 19 18 32 32 C 1.36492 * 119.98148 * 0.25159 * 11 10 8 33 33 N 1.35950 * 120.50261 * 359.97438 * 32 11 10 34 34 H 0.96700 * 113.99861 * 60.00265 * 1 2 3 35 35 H 1.09000 * 109.46882 * 119.99657 * 2 1 3 36 36 H 1.48504 * 109.99674 * 298.68075 * 3 2 1 37 37 H 1.48504 * 110.00130 * 59.99564 * 3 2 1 38 38 H 1.07997 * 125.67172 * 359.97438 * 5 4 2 39 39 H 1.08008 * 120.23399 * 179.76671 * 10 8 7 40 40 H 0.97001 * 119.99816 * 359.97438 * 14 12 11 41 41 H 1.09006 * 109.46579 * 299.99841 * 17 15 14 42 42 H 1.08997 * 109.47346 * 60.00058 * 17 15 14 43 43 H 1.08997 * 109.47167 * 179.97438 * 18 17 15 44 44 H 1.09010 * 109.46972 * 59.99684 * 18 17 15 45 45 H 1.08000 * 120.13394 * 0.37470 * 24 23 22 46 46 H 1.07998 * 119.79263 * 180.02562 * 25 24 23 47 47 H 1.08000 * 119.76183 * 180.02562 * 26 25 24 48 48 H 1.07999 * 120.06121 * 180.02562 * 27 26 25 49 49 H 1.08998 * 109.47602 * 180.02562 * 30 19 18 50 50 H 1.09005 * 109.46676 * 60.00055 * 30 19 18 51 51 H 1.08997 * 109.47104 * 299.99747 * 31 30 19 52 52 H 1.08996 * 109.47074 * 179.97438 * 31 30 19 53 53 H 1.08000 * 119.75139 * 179.97438 * 32 11 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7105 -1.2304 5 6 3.0857 -0.4617 -1.8847 6 7 3.1765 -1.2963 -2.9237 7 6 2.1067 -2.0761 -2.9513 8 6 1.7143 -3.1156 -3.8234 9 35 2.8189 -3.6074 -5.2773 10 6 0.5370 -3.7565 -3.6116 11 6 -0.2757 -3.3803 -2.5129 12 6 -1.5553 -4.0743 -2.2693 13 8 -2.2520 -3.7516 -1.3265 14 7 -1.9513 -5.0657 -3.0919 15 6 -3.2212 -5.7550 -2.8498 16 1 -3.3935 -5.8327 -1.7763 17 6 -4.3617 -4.9639 -3.4935 18 6 -5.6879 -5.6835 -3.2402 19 6 -5.6321 -7.0855 -3.8500 20 1 -5.4600 -7.0082 -4.9235 21 6 -6.9386 -7.7940 -3.6010 22 7 -7.4318 -8.0510 -2.4269 23 6 -8.6203 -8.6951 -2.5819 24 6 -9.5692 -9.1990 -1.6915 25 6 -10.6975 -9.8223 -2.1764 26 6 -10.8961 -9.9514 -3.5429 27 6 -9.9664 -9.4580 -4.4347 28 6 -8.8249 -8.8277 -3.9641 29 8 -7.7564 -8.2549 -4.5605 30 6 -4.4916 -7.8766 -3.2064 31 6 -3.1653 -7.1571 -3.4597 32 6 0.1255 -2.3761 -1.6800 33 7 1.3026 -1.7306 -1.8944 34 1 -0.3933 0.4417 -0.7651 35 1 1.7923 -0.5138 0.8900 36 1 1.5879 2.4585 -1.2243 37 1 1.5615 2.4679 1.2085 38 1 3.8142 0.2881 -1.6137 39 1 0.2234 -4.5506 -4.2732 40 1 -1.3956 -5.3228 -3.8442 41 1 -4.4017 -3.9651 -3.0586 42 1 -4.1894 -4.8862 -4.5670 43 1 -6.5005 -5.1197 -3.6984 44 1 -5.8600 -5.7608 -2.1665 45 1 -9.4196 -9.1004 -0.6265 46 1 -11.4328 -10.2123 -1.4883 47 1 -11.7850 -10.4417 -3.9115 48 1 -10.1280 -9.5618 -5.4974 49 1 -4.4515 -8.8754 -3.6411 50 1 -4.6637 -7.9539 -2.1328 51 1 -2.9932 -7.0797 -4.5332 52 1 -2.3529 -7.7204 -3.0008 53 1 -0.4968 -2.0922 -0.8443 There are 79 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 79 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_13774298_12335884.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 14:13:44 Heat of formation + Delta-G solvation = 69.325653 kcal Electronic energy + Delta-G solvation = -40890.229291 eV Core-core repulsion = 35549.380756 eV Total energy + Delta-G solvation = -5340.848534 eV No. of doubly occupied orbitals = 79 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 497.078 amu Computer time = 2.05 seconds Orbital eigenvalues (eV) -44.36117 -44.26220 -41.44034 -39.72690 -38.93073 -38.47386 -38.07139 -36.19715 -35.51501 -35.11601 -32.90947 -31.96684 -31.92152 -31.71326 -31.49785 -30.26425 -29.55013 -26.91561 -26.12349 -24.83128 -24.09735 -24.01087 -23.87109 -23.14893 -22.60049 -22.29839 -21.72551 -20.91352 -19.54678 -19.10872 -18.73862 -18.34455 -18.26006 -17.84267 -17.82233 -17.53846 -17.21210 -16.93703 -16.34575 -16.22305 -16.07229 -15.91719 -15.68372 -15.47125 -15.23443 -15.19749 -14.99705 -14.91264 -14.68299 -14.66088 -14.12333 -14.12085 -13.91328 -13.54246 -13.44694 -13.36720 -13.31706 -13.20522 -13.03350 -12.77190 -12.63834 -12.53764 -12.49490 -12.31778 -12.17662 -12.16262 -11.66024 -11.55305 -11.49943 -11.41901 -11.37883 -11.32604 -11.23719 -11.06750 -10.27408 -10.00866 -9.87999 -9.51894 -9.08613 -4.95298 -0.91078 -0.38391 -0.37692 0.15020 0.19567 0.96024 1.13200 1.31075 1.35636 1.40829 1.66287 1.81074 1.89791 2.00466 2.22830 2.59062 2.68378 2.82073 2.97946 3.13971 3.36026 3.41403 3.44479 3.46996 3.54601 3.58806 3.72712 3.84318 3.87352 4.04001 4.07010 4.13631 4.16183 4.22664 4.25204 4.29057 4.29973 4.30281 4.37769 4.40555 4.43363 4.44164 4.49139 4.57498 4.71911 4.86181 4.93382 4.96425 4.98882 4.99829 5.06042 5.12042 5.17279 5.22523 5.24740 5.28237 5.32370 5.33292 5.42761 5.56437 5.65736 6.16931 6.32737 6.49597 6.50623 6.99134 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.547 6.547 2 C -0.054 4.054 3 Si 0.816 3.184 4 C -0.091 4.091 5 C 0.046 3.954 6 N -0.493 5.493 7 C 0.223 3.777 8 C -0.080 4.080 9 Br 0.007 6.993 10 C -0.024 4.024 11 C -0.167 4.167 12 C 0.578 3.422 13 O -0.566 6.566 14 N -0.700 5.700 15 C 0.144 3.856 16 H 0.072 0.928 17 C -0.120 4.120 18 C -0.100 4.100 19 C 0.007 3.993 20 H 0.128 0.872 21 C 0.251 3.749 22 N -0.501 5.501 23 C -0.010 4.010 24 C -0.082 4.082 25 C -0.112 4.112 26 C -0.087 4.087 27 C -0.102 4.102 28 C -0.020 4.020 29 O -0.224 6.224 30 C -0.101 4.101 31 C -0.114 4.114 32 C 0.154 3.846 33 N -0.359 5.359 34 H 0.386 0.614 35 H 0.138 0.862 36 H -0.290 1.290 37 H -0.289 1.289 38 H 0.228 0.772 39 H 0.189 0.811 40 H 0.418 0.582 41 H 0.058 0.942 42 H 0.094 0.906 43 H 0.069 0.931 44 H 0.061 0.939 45 H 0.141 0.859 46 H 0.168 0.832 47 H 0.175 0.825 48 H 0.154 0.846 49 H 0.082 0.918 50 H 0.064 0.936 51 H 0.103 0.897 52 H 0.090 0.910 53 H 0.188 0.812 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.070 -2.534 -3.321 4.178 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.355 6.355 2 C -0.161 4.161 3 Si 0.718 3.282 4 C -0.201 4.201 5 C -0.104 4.104 6 N -0.212 5.212 7 C -0.022 4.022 8 C -0.162 4.162 9 Br 0.092 6.908 10 C -0.050 4.050 11 C -0.175 4.175 12 C 0.365 3.635 13 O -0.445 6.445 14 N -0.351 5.351 15 C 0.040 3.960 16 H 0.090 0.910 17 C -0.158 4.158 18 C -0.139 4.139 19 C -0.012 4.012 20 H 0.146 0.854 21 C 0.040 3.960 22 N -0.230 5.230 23 C -0.121 4.121 24 C -0.101 4.101 25 C -0.131 4.131 26 C -0.104 4.104 27 C -0.121 4.121 28 C -0.070 4.070 29 O -0.116 6.116 30 C -0.140 4.140 31 C -0.152 4.152 32 C 0.028 3.972 33 N -0.032 5.032 34 H 0.235 0.765 35 H 0.156 0.844 36 H -0.216 1.216 37 H -0.216 1.216 38 H 0.245 0.755 39 H 0.206 0.794 40 H 0.256 0.744 41 H 0.077 0.923 42 H 0.112 0.888 43 H 0.088 0.912 44 H 0.080 0.920 45 H 0.158 0.842 46 H 0.185 0.815 47 H 0.193 0.807 48 H 0.171 0.829 49 H 0.100 0.900 50 H 0.083 0.917 51 H 0.122 0.878 52 H 0.108 0.892 53 H 0.205 0.795 Dipole moment (debyes) X Y Z Total from point charges 0.676 -1.819 -2.592 3.238 hybrid contribution -2.169 -0.202 -0.277 2.196 sum -1.494 -2.020 -2.870 3.814 Atomic orbital electron populations 1.86594 1.18400 1.80123 1.50361 1.25210 0.83323 1.12368 0.95228 0.93473 0.89302 0.68687 0.76775 1.22398 0.98448 0.96623 1.02675 1.23025 0.96421 0.99963 0.90978 1.70842 1.19867 1.08150 1.22298 1.20760 0.89999 0.99930 0.91474 1.20592 0.98426 0.99142 0.98031 1.96844 1.66429 1.90296 1.37188 1.21376 0.90065 0.98122 0.95457 1.19274 0.98291 1.00841 0.99057 1.17572 0.83907 0.79990 0.82080 1.90861 1.56190 1.65947 1.31545 1.45734 1.23160 1.35276 1.30953 1.21084 0.82059 0.92043 1.00781 0.90988 1.21849 0.92692 0.98614 1.02655 1.21449 0.98366 0.92767 1.01348 1.20124 0.83217 0.93512 1.04331 0.85358 1.27081 0.94590 0.94065 0.80272 1.70565 1.09151 1.17843 1.25433 1.20320 0.94933 1.03284 0.93555 1.20653 0.92390 0.97425 0.99650 1.21512 0.96883 0.98053 0.96666 1.21542 0.98997 0.97438 0.92470 1.20339 0.90040 0.99170 1.02519 1.20789 0.91432 1.02388 0.92394 1.84480 1.28206 1.60897 1.38034 1.21482 0.92167 0.98945 1.01411 1.21764 0.97137 0.92760 1.03542 1.22204 0.85229 0.90724 0.99083 1.42742 1.15005 1.24229 1.21250 0.76473 0.84446 1.21616 1.21638 0.75547 0.79431 0.74365 0.92314 0.88774 0.91183 0.92035 0.84164 0.81500 0.80728 0.82868 0.89984 0.91714 0.87812 0.89179 0.79518 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.27 10.90 -148.98 -1.62 -1.90 16 2 C -0.05 0.15 3.06 71.24 0.22 0.36 16 3 Si 0.82 -4.18 31.18 68.60 2.14 -2.04 16 4 C -0.09 -0.06 6.24 41.01 0.26 0.19 16 5 C 0.05 0.03 10.44 83.68 0.87 0.90 16 6 N -0.49 -3.38 11.30 -194.11 -2.19 -5.57 16 7 C 0.22 1.25 7.59 134.18 1.02 2.27 16 8 C -0.08 -0.14 6.24 22.42 0.14 0.00 16 9 Br 0.01 0.01 33.72 -20.37 -0.69 -0.68 16 10 C -0.02 0.09 9.26 22.55 0.21 0.29 16 11 C -0.17 0.07 5.84 -20.35 -0.12 -0.05 16 12 C 0.58 0.53 7.73 86.71 0.67 1.20 16 13 O -0.57 -5.26 15.94 -4.00 -0.06 -5.32 16 14 N -0.70 4.17 5.03 -445.64 -2.24 1.93 16 15 C 0.14 -0.65 2.45 44.99 0.11 -0.54 16 16 H 0.07 0.10 7.58 -2.39 -0.02 0.08 16 17 C -0.12 0.47 5.49 30.60 0.17 0.64 16 18 C -0.10 0.12 5.18 30.59 0.16 0.28 16 19 C 0.01 -0.02 2.66 -11.54 -0.03 -0.05 16 20 H 0.13 -0.91 8.14 -2.39 -0.02 -0.93 16 21 C 0.25 1.52 6.75 88.39 0.60 2.12 16 22 N -0.50 -5.24 11.32 -296.25 -3.35 -8.60 16 23 C -0.01 -0.10 7.24 39.32 0.28 0.18 16 24 C -0.08 -0.40 10.10 22.46 0.23 -0.17 16 25 C -0.11 0.11 10.02 22.25 0.22 0.33 16 26 C -0.09 0.19 10.03 22.31 0.22 0.41 16 27 C -0.10 -0.20 10.06 22.29 0.22 0.02 16 28 C -0.02 -0.17 7.43 22.88 0.17 0.00 16 29 O -0.22 -1.81 10.77 -10.02 -0.11 -1.92 16 30 C -0.10 0.45 5.18 30.59 0.16 0.60 16 31 C -0.11 1.05 5.39 30.59 0.16 1.21 16 32 C 0.15 0.36 9.91 83.65 0.83 1.18 16 33 N -0.36 -1.24 2.93 -337.71 -0.99 -2.23 16 34 H 0.39 -1.45 8.70 -74.06 -0.64 -2.09 16 35 H 0.14 -0.68 7.96 -2.39 -0.02 -0.69 16 36 H -0.29 -0.21 7.11 99.48 0.71 0.49 16 37 H -0.29 -0.51 7.11 99.48 0.71 0.19 16 38 H 0.23 -1.81 6.90 -2.91 -0.02 -1.83 16 39 H 0.19 -2.15 6.44 -2.91 -0.02 -2.17 16 40 H 0.42 -5.27 6.64 -92.71 -0.62 -5.89 16 41 H 0.06 0.04 8.14 -2.38 -0.02 0.02 16 42 H 0.09 -0.77 8.14 -2.39 -0.02 -0.79 16 43 H 0.07 -0.03 8.14 -2.39 -0.02 -0.05 16 44 H 0.06 0.21 8.14 -2.38 -0.02 0.19 16 45 H 0.14 0.37 8.06 -2.91 -0.02 0.35 16 46 H 0.17 -1.21 8.06 -2.91 -0.02 -1.24 16 47 H 0.18 -1.60 8.06 -2.91 -0.02 -1.63 16 48 H 0.15 -0.39 8.06 -2.91 -0.02 -0.42 16 49 H 0.08 -0.41 8.14 -2.39 -0.02 -0.43 16 50 H 0.06 0.00 8.14 -2.38 -0.02 -0.02 16 51 H 0.10 -1.45 8.14 -2.39 -0.02 -1.47 16 52 H 0.09 -0.90 8.14 -2.39 -0.02 -0.92 16 53 H 0.19 0.60 6.19 -2.91 -0.02 0.59 16 Total: 0.00 -31.03 457.51 -2.56 -33.58 By element: Atomic # 1 Polarization: -18.45 SS G_CDS: -0.21 Total: -18.65 kcal Atomic # 6 Polarization: 4.63 SS G_CDS: 6.77 Total: 11.40 kcal Atomic # 7 Polarization: -5.69 SS G_CDS: -8.78 Total: -14.47 kcal Atomic # 8 Polarization: -7.34 SS G_CDS: -1.80 Total: -9.14 kcal Atomic # 14 Polarization: -4.18 SS G_CDS: 2.14 Total: -2.04 kcal Atomic # 35 Polarization: 0.01 SS G_CDS: -0.69 Total: -0.68 kcal Total: -31.03 -2.56 -33.58 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_13774298_12335884.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 102.910 kcal (2) G-P(sol) polarization free energy of solvation -31.025 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 71.884 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.559 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.584 kcal (6) G-S(sol) free energy of system = (1) + (5) 69.326 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.05 seconds