Wall clock time and date at job start Thu Mar 4 2021 19:54:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52996 * 1 3 3 C 1.52999 * 109.47346 * 2 1 4 4 C 1.53001 * 109.47057 * 239.99800 * 2 1 3 5 5 O 1.45205 * 109.46957 * 120.00079 * 2 1 3 6 6 C 1.34631 * 117.00152 * 59.99840 * 5 2 1 7 7 O 1.21515 * 119.99982 * 0.02562 * 6 5 2 8 8 N 1.34773 * 120.00370 * 179.97438 * 6 5 2 9 9 C 1.46495 * 120.00376 * 179.97438 * 8 6 5 10 10 H 1.09003 * 112.85310 * 336.19502 * 9 8 6 11 11 C 1.54055 * 113.61900 * 107.50460 * 9 8 6 12 12 C 1.53783 * 86.98501 * 139.98052 * 11 9 8 13 13 H 1.09001 * 113.61442 * 219.98520 * 12 11 9 14 14 N 1.46499 * 113.61723 * 89.16194 * 12 11 9 15 15 C 1.34782 * 119.99981 * 105.85964 * 14 12 11 16 16 O 1.21593 * 119.99925 * 0.02562 * 15 14 12 17 17 C 1.47578 * 119.99846 * 180.02562 * 15 14 12 18 18 C 1.36495 * 120.00747 * 179.72972 * 17 15 14 19 19 N 1.35943 * 120.50172 * 180.27694 * 18 17 15 20 20 C 1.37003 * 132.40984 * 179.97438 * 19 18 17 21 21 C 1.50706 * 126.42718 * 359.97438 * 20 19 18 22 22 O 1.42904 * 109.46923 * 30.00091 * 21 20 19 23 23 Si 1.86295 * 109.47073 * 149.99967 * 21 20 19 24 24 C 1.35003 * 107.14570 * 180.02562 * 20 19 18 25 25 N 1.33589 * 108.65308 * 359.97438 * 24 20 19 26 26 C 1.32416 * 109.22616 * 359.97438 * 25 24 20 27 27 C 1.41248 * 132.12068 * 179.97438 * 26 25 24 28 28 Br 1.89098 * 120.25675 * 359.97438 * 27 26 25 29 29 C 1.35702 * 119.48850 * 180.02562 * 27 26 25 30 30 C 1.53781 * 87.17457 * 334.56806 * 12 11 9 31 31 H 1.09004 * 109.46922 * 300.00436 * 1 2 3 32 32 H 1.09005 * 109.47069 * 59.99961 * 1 2 3 33 33 H 1.08998 * 109.47534 * 180.02562 * 1 2 3 34 34 H 1.09008 * 109.46931 * 179.97438 * 3 2 1 35 35 H 1.08999 * 109.47200 * 299.99639 * 3 2 1 36 36 H 1.08997 * 109.47062 * 60.00420 * 3 2 1 37 37 H 1.08998 * 109.46983 * 300.00379 * 4 2 1 38 38 H 1.08999 * 109.47246 * 60.00509 * 4 2 1 39 39 H 1.08999 * 109.47205 * 180.02562 * 4 2 1 40 40 H 0.97006 * 119.99897 * 359.97438 * 8 6 5 41 41 H 1.08999 * 113.61613 * 25.47874 * 11 9 8 42 42 H 1.09002 * 113.69809 * 254.49308 * 11 9 8 43 43 H 0.97000 * 120.00074 * 285.86240 * 14 12 11 44 44 H 1.07998 * 119.74990 * 0.25080 * 18 17 15 45 45 H 1.08999 * 109.47020 * 270.00180 * 21 20 19 46 46 H 0.96704 * 113.99935 * 59.99989 * 22 21 20 47 47 H 1.48491 * 110.00272 * 180.02562 * 23 21 20 48 48 H 1.48508 * 110.00149 * 301.32334 * 23 21 20 49 49 H 1.07997 * 125.67479 * 179.97438 * 24 20 19 50 50 H 1.07998 * 120.23451 * 180.02562 * 29 27 26 51 51 H 1.09005 * 113.61464 * 140.01707 * 30 12 11 52 52 H 1.08999 * 113.62019 * 270.84444 * 30 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0399 -0.7213 -1.2492 5 8 2.0139 -0.6845 1.1856 6 6 1.6522 -1.9723 1.3384 7 8 0.9515 -2.5097 0.5036 8 7 2.0679 -2.6657 2.4166 9 6 1.6738 -4.0668 2.5832 10 1 0.7589 -4.3160 2.0455 11 6 2.8234 -5.0640 2.3439 12 6 2.2733 -5.8600 3.5392 13 1 3.0496 -6.2658 4.1880 14 7 1.2649 -6.8554 3.1673 15 6 1.5807 -8.1657 3.1635 16 8 2.7025 -8.5216 3.4691 17 6 0.5649 -9.1684 2.7883 18 6 0.8861 -10.4950 2.7790 19 7 -0.0401 -11.4267 2.4296 20 6 0.0128 -12.7926 2.3369 21 6 1.2091 -13.6634 2.6229 22 8 2.0237 -13.0415 3.6188 23 14 0.6347 -15.3249 3.2392 24 6 -1.2076 -13.2121 1.9401 25 7 -1.9980 -12.1457 1.7900 26 6 -1.3131 -11.0507 2.0819 27 6 -1.6685 -9.6836 2.0851 28 35 -3.4186 -9.1530 1.6044 29 6 -0.7439 -8.7539 2.4348 30 6 1.6754 -4.5374 4.0473 31 1 -0.3633 0.5139 0.8900 32 1 -0.3633 0.5139 -0.8900 33 1 -0.3634 -1.0276 0.0005 34 1 3.1301 1.4424 0.0005 35 1 1.6768 1.9563 -0.8900 36 1 1.6768 1.9563 0.8900 37 1 1.6765 -1.7489 -1.2492 38 1 1.6767 -0.2075 -2.1392 39 1 3.1299 -0.7217 -1.2490 40 1 2.6281 -2.2371 3.0825 41 1 3.8124 -4.6405 2.5194 42 1 2.7518 -5.5958 1.3951 43 1 0.3699 -6.5715 2.9238 44 1 1.8837 -10.8068 3.0509 45 1 1.7891 -13.7953 1.7095 46 1 1.5712 -12.8928 4.4604 47 1 1.8050 -16.1929 3.5254 48 1 -0.1842 -15.1561 4.4665 49 1 -1.4967 -14.2390 1.7720 50 1 -1.0027 -7.7054 2.4418 51 1 0.6775 -4.6442 4.4726 52 1 2.3505 -3.9708 4.6887 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_13941010_12335884.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 19:54:48 Heat of formation + Delta-G solvation = -16.448362 kcal Electronic energy + Delta-G solvation = -38206.296597 eV Core-core repulsion = 33028.639513 eV Total energy + Delta-G solvation = -5177.657083 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 467.093 amu Computer time = 1.70 seconds Orbital eigenvalues (eV) -44.28402 -42.00279 -41.44761 -39.97017 -38.53627 -38.13859 -37.89173 -35.71031 -35.35703 -34.85272 -33.55805 -32.35213 -31.76406 -30.28684 -28.38038 -28.31454 -26.96561 -26.80958 -26.62229 -25.18404 -24.10673 -23.18472 -22.64810 -22.16821 -21.24295 -20.64688 -19.64814 -19.23951 -18.63186 -18.31798 -17.91195 -17.77334 -17.53248 -17.18986 -17.11576 -16.57846 -16.30605 -16.20294 -16.06773 -15.87797 -15.75406 -15.53884 -15.38543 -14.99915 -14.70564 -14.65372 -14.48754 -14.11745 -13.94506 -13.58461 -13.49092 -13.37491 -13.37031 -13.19203 -13.13873 -13.03694 -12.92273 -12.87626 -12.78116 -12.55368 -12.31103 -12.16067 -11.98118 -11.70748 -11.58248 -11.41099 -11.40538 -11.39929 -11.29045 -11.12147 -11.07929 -10.37346 -10.15364 -10.02380 -9.10824 -4.94572 -0.93965 -0.41297 0.16762 0.94487 1.10071 1.17539 1.38174 1.66497 1.72762 1.78633 1.85416 1.98852 2.18225 2.79274 2.97305 3.10647 3.14218 3.31201 3.32881 3.41806 3.44371 3.47546 3.73045 3.77353 3.80481 3.83616 3.93334 3.96046 4.11275 4.27788 4.35791 4.40897 4.43641 4.46183 4.54374 4.59958 4.64732 4.70790 4.75140 4.75257 4.80902 4.84536 4.86444 4.91743 4.94510 4.96821 5.09918 5.22507 5.25777 5.30879 5.32499 5.48069 5.54229 5.59138 6.17612 6.22321 6.39675 6.47924 6.90141 7.33653 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.179 4.179 2 C 0.128 3.872 3 C -0.138 4.138 4 C -0.180 4.180 5 O -0.370 6.370 6 C 0.642 3.358 7 O -0.594 6.594 8 N -0.688 5.688 9 C 0.135 3.865 10 H 0.110 0.890 11 C -0.164 4.164 12 C 0.122 3.878 13 H 0.109 0.891 14 N -0.693 5.693 15 C 0.584 3.416 16 O -0.561 6.561 17 C -0.169 4.169 18 C 0.158 3.842 19 N -0.359 5.359 20 C -0.089 4.089 21 C -0.053 4.053 22 O -0.547 6.547 23 Si 0.816 3.184 24 C 0.045 3.955 25 N -0.492 5.492 26 C 0.223 3.777 27 C -0.079 4.079 28 Br 0.006 6.994 29 C -0.027 4.027 30 C -0.131 4.131 31 H 0.062 0.938 32 H 0.085 0.915 33 H 0.065 0.935 34 H 0.068 0.932 35 H 0.097 0.903 36 H 0.070 0.930 37 H 0.064 0.936 38 H 0.085 0.915 39 H 0.060 0.940 40 H 0.419 0.581 41 H 0.106 0.894 42 H 0.062 0.938 43 H 0.415 0.585 44 H 0.192 0.808 45 H 0.139 0.861 46 H 0.386 0.614 47 H -0.289 1.289 48 H -0.290 1.290 49 H 0.229 0.771 50 H 0.183 0.817 51 H 0.100 0.900 52 H 0.126 0.874 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.412 2.717 1.953 3.371 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.237 4.237 2 C 0.092 3.908 3 C -0.195 4.195 4 C -0.237 4.237 5 O -0.284 6.284 6 C 0.396 3.604 7 O -0.485 6.485 8 N -0.348 5.348 9 C 0.031 3.969 10 H 0.128 0.872 11 C -0.204 4.204 12 C 0.017 3.983 13 H 0.127 0.873 14 N -0.344 5.344 15 C 0.370 3.630 16 O -0.440 6.440 17 C -0.177 4.177 18 C 0.032 3.968 19 N -0.032 5.032 20 C -0.200 4.200 21 C -0.161 4.161 22 O -0.354 6.354 23 Si 0.717 3.283 24 C -0.104 4.104 25 N -0.211 5.211 26 C -0.022 4.022 27 C -0.161 4.161 28 Br 0.091 6.909 29 C -0.053 4.053 30 C -0.169 4.169 31 H 0.081 0.919 32 H 0.104 0.896 33 H 0.084 0.916 34 H 0.087 0.913 35 H 0.116 0.884 36 H 0.089 0.911 37 H 0.083 0.917 38 H 0.104 0.896 39 H 0.079 0.921 40 H 0.256 0.744 41 H 0.124 0.876 42 H 0.081 0.919 43 H 0.253 0.747 44 H 0.209 0.791 45 H 0.156 0.844 46 H 0.236 0.764 47 H -0.216 1.216 48 H -0.216 1.216 49 H 0.245 0.755 50 H 0.200 0.800 51 H 0.119 0.881 52 H 0.144 0.856 Dipole moment (debyes) X Y Z Total from point charges -0.161 1.813 1.451 2.328 hybrid contribution 1.226 0.991 1.022 1.879 sum 1.064 2.804 2.473 3.888 Atomic orbital electron populations 1.22469 0.93930 1.03773 1.03491 1.22326 0.94510 0.92509 0.81488 1.21893 1.02417 0.90990 1.04235 1.22472 1.01551 1.02277 0.97436 1.86312 1.71524 1.23448 1.47158 1.18459 0.78600 0.80691 0.82686 1.90905 1.42375 1.71010 1.44168 1.44730 1.54775 1.12187 1.23070 1.22804 0.98588 0.77171 0.98313 0.87201 1.24063 1.00132 0.97085 0.99094 1.21711 0.91713 0.87746 0.97170 0.87344 1.45431 1.15984 1.04529 1.68472 1.17502 0.86082 0.82691 0.76722 1.90851 1.22584 1.80904 1.49663 1.19235 0.95395 0.92581 1.10502 1.22220 0.95077 0.87666 0.91852 1.42751 1.10474 1.07143 1.42869 1.22433 1.01403 0.80490 1.15643 1.25217 0.90492 1.04056 0.96322 1.86592 1.41637 1.81244 1.25952 0.93441 0.79341 0.71991 0.83490 1.23045 0.87754 1.00159 0.99430 1.70847 1.31314 0.96776 1.22162 1.20712 0.82177 0.95134 1.04145 1.20574 0.95804 0.90053 1.09695 1.96845 1.13447 1.89423 1.91196 1.21338 0.89583 1.01121 0.93274 1.23739 1.04520 0.93607 0.95041 0.91852 0.89642 0.91619 0.91263 0.88439 0.91099 0.91743 0.89598 0.92092 0.74366 0.87563 0.91896 0.74699 0.79148 0.84391 0.76415 1.21559 1.21611 0.75469 0.80006 0.88105 0.85587 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.37 8.37 71.98 0.60 0.24 16 2 C 0.13 0.25 1.13 -10.79 -0.01 0.24 16 3 C -0.14 0.38 8.85 71.98 0.64 1.02 16 4 C -0.18 -0.48 8.37 71.98 0.60 0.12 16 5 O -0.37 -1.44 9.94 -55.40 -0.55 -1.99 16 6 C 0.64 2.83 8.06 129.79 1.05 3.87 16 7 O -0.59 -5.76 11.48 19.80 0.23 -5.53 16 8 N -0.69 2.02 5.36 -567.17 -3.04 -1.02 16 9 C 0.14 -0.71 4.13 45.62 0.19 -0.52 16 10 H 0.11 -0.32 7.46 -2.39 -0.02 -0.34 16 11 C -0.16 0.67 7.70 31.21 0.24 0.91 16 12 C 0.12 -0.70 4.29 45.52 0.20 -0.50 16 13 H 0.11 -0.35 7.50 -2.39 -0.02 -0.37 16 14 N -0.69 3.46 5.22 -443.14 -2.31 1.15 16 15 C 0.58 0.64 7.76 86.71 0.67 1.31 16 16 O -0.56 -4.68 15.89 -4.01 -0.06 -4.75 16 17 C -0.17 -0.05 5.84 -20.35 -0.12 -0.17 16 18 C 0.16 0.37 9.91 83.65 0.83 1.20 16 19 N -0.36 -1.32 2.93 -337.71 -0.99 -2.31 16 20 C -0.09 -0.06 6.24 41.01 0.26 0.19 16 21 C -0.05 0.16 3.06 71.24 0.22 0.38 16 22 O -0.55 0.07 10.90 -148.98 -1.62 -1.55 16 23 Si 0.82 -4.42 31.18 68.60 2.14 -2.28 16 24 C 0.05 0.04 10.44 83.68 0.87 0.91 16 25 N -0.49 -3.63 11.30 -194.10 -2.19 -5.82 16 26 C 0.22 1.41 7.59 134.18 1.02 2.43 16 27 C -0.08 -0.25 6.24 22.42 0.14 -0.11 16 28 Br 0.01 0.02 33.72 -20.37 -0.69 -0.67 16 29 C -0.03 0.05 9.26 22.55 0.21 0.26 16 30 C -0.13 1.35 7.57 31.12 0.24 1.59 16 31 H 0.06 0.08 8.14 -2.38 -0.02 0.06 16 32 H 0.08 -0.09 8.14 -2.38 -0.02 -0.10 16 33 H 0.06 0.46 5.88 -2.39 -0.01 0.44 16 34 H 0.07 -0.19 8.14 -2.38 -0.02 -0.21 16 35 H 0.10 -0.56 8.14 -2.39 -0.02 -0.58 16 36 H 0.07 -0.22 8.14 -2.39 -0.02 -0.24 16 37 H 0.06 0.50 5.88 -2.39 -0.01 0.49 16 38 H 0.09 -0.04 8.14 -2.39 -0.02 -0.06 16 39 H 0.06 0.14 8.14 -2.39 -0.02 0.12 16 40 H 0.42 -3.20 8.84 -92.70 -0.82 -4.01 16 41 H 0.11 -0.56 8.14 -2.39 -0.02 -0.58 16 42 H 0.06 0.00 8.14 -2.39 -0.02 -0.02 16 43 H 0.41 -4.06 6.74 -92.71 -0.62 -4.69 16 44 H 0.19 0.50 6.19 -2.91 -0.02 0.48 16 45 H 0.14 -0.72 7.96 -2.39 -0.02 -0.74 16 46 H 0.39 -1.72 8.70 -74.05 -0.64 -2.37 16 47 H -0.29 -0.40 7.11 99.48 0.71 0.31 16 48 H -0.29 -0.14 7.11 99.48 0.71 0.57 16 49 H 0.23 -1.80 6.90 -2.91 -0.02 -1.82 16 50 H 0.18 -1.59 6.44 -2.91 -0.02 -1.61 16 51 H 0.10 -1.23 8.14 -2.38 -0.02 -1.24 16 52 H 0.13 -1.70 8.12 -2.39 -0.02 -1.72 16 Total: 0.00 -27.33 445.00 -2.29 -29.62 By element: Atomic # 1 Polarization: -17.21 SS G_CDS: -1.03 Total: -18.24 kcal Atomic # 6 Polarization: 5.54 SS G_CDS: 7.83 Total: 13.38 kcal Atomic # 7 Polarization: 0.54 SS G_CDS: -8.54 Total: -7.99 kcal Atomic # 8 Polarization: -11.81 SS G_CDS: -2.01 Total: -13.82 kcal Atomic # 14 Polarization: -4.42 SS G_CDS: 2.14 Total: -2.28 kcal Atomic # 35 Polarization: 0.02 SS G_CDS: -0.69 Total: -0.67 kcal Total: -27.33 -2.29 -29.62 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_13941010_12335884.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 13.169 kcal (2) G-P(sol) polarization free energy of solvation -27.328 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -14.159 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.289 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.618 kcal (6) G-S(sol) free energy of system = (1) + (5) -16.448 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.70 seconds