Wall clock time and date at job start Thu Mar 4 2021 19:54:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53006 * 1 3 3 C 1.53000 * 109.46882 * 2 1 4 4 C 1.53005 * 109.46858 * 240.00012 * 2 1 3 5 5 O 1.45203 * 109.46745 * 120.00064 * 2 1 3 6 6 C 1.34634 * 116.99800 * 60.00302 * 5 2 1 7 7 O 1.21505 * 120.00440 * 359.97438 * 6 5 2 8 8 N 1.34779 * 119.99428 * 179.97438 * 6 5 2 9 9 C 1.46507 * 119.99736 * 179.97438 * 8 6 5 10 10 H 1.08998 * 112.85035 * 313.94172 * 9 8 6 11 11 C 1.53779 * 113.61062 * 85.14082 * 9 8 6 12 12 C 1.53778 * 87.08250 * 89.11752 * 11 9 8 13 13 H 1.08997 * 113.61904 * 140.06625 * 12 11 9 14 14 N 1.46500 * 113.61194 * 270.88034 * 12 11 9 15 15 C 1.34775 * 120.00379 * 201.85078 * 14 12 11 16 16 O 1.21599 * 119.99525 * 0.02562 * 15 14 12 17 17 C 1.47575 * 120.00502 * 179.97438 * 15 14 12 18 18 C 1.36494 * 120.01107 * 180.02562 * 17 15 14 19 19 N 1.35940 * 120.50418 * 180.02562 * 18 17 15 20 20 C 1.37009 * 132.41269 * 180.02562 * 19 18 17 21 21 C 1.50697 * 126.42447 * 0.03208 * 20 19 18 22 22 O 1.42897 * 109.47692 * 329.71808 * 21 20 19 23 23 Si 1.86305 * 109.46965 * 209.71399 * 21 20 19 24 24 C 1.35011 * 107.14337 * 179.77511 * 20 19 18 25 25 N 1.33584 * 108.65222 * 0.22245 * 24 20 19 26 26 C 1.32410 * 109.22710 * 0.02562 * 25 24 20 27 27 C 1.41252 * 132.11879 * 180.02562 * 26 25 24 28 28 Br 1.89103 * 120.25386 * 359.97438 * 27 26 25 29 29 C 1.35707 * 119.48844 * 179.35849 * 27 26 25 30 30 C 1.53783 * 87.08502 * 25.42925 * 12 11 9 31 31 H 1.09005 * 109.47123 * 300.00056 * 1 2 3 32 32 H 1.09003 * 109.47171 * 59.99846 * 1 2 3 33 33 H 1.08997 * 109.47134 * 179.97438 * 1 2 3 34 34 H 1.09003 * 109.46373 * 179.97438 * 3 2 1 35 35 H 1.08998 * 109.47282 * 299.99550 * 3 2 1 36 36 H 1.08999 * 109.47266 * 60.00472 * 3 2 1 37 37 H 1.08998 * 109.46850 * 299.99583 * 4 2 1 38 38 H 1.08995 * 109.47055 * 59.99739 * 4 2 1 39 39 H 1.08999 * 109.46372 * 180.02562 * 4 2 1 40 40 H 0.97002 * 120.00479 * 0.02562 * 8 6 5 41 41 H 1.09000 * 113.61767 * 334.56300 * 11 9 8 42 42 H 1.09003 * 113.68747 * 203.66913 * 11 9 8 43 43 H 0.97000 * 120.00338 * 21.85955 * 14 12 11 44 44 H 1.08003 * 119.74831 * 0.04446 * 18 17 15 45 45 H 1.09003 * 109.46971 * 89.71853 * 21 20 19 46 46 H 0.96709 * 113.99286 * 299.99930 * 22 21 20 47 47 H 1.48497 * 109.99835 * 58.68440 * 23 21 20 48 48 H 1.48502 * 110.00026 * 180.02562 * 23 21 20 49 49 H 1.07993 * 125.67172 * 180.18663 * 24 20 19 50 50 H 1.08004 * 120.23452 * 180.17743 * 29 27 26 51 51 H 1.08998 * 113.61251 * 89.11174 * 30 12 11 52 52 H 1.09003 * 113.61776 * 220.02684 * 30 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7213 -1.2493 5 8 2.0140 -0.6845 1.1856 6 6 1.6522 -1.9723 1.3383 7 8 0.9509 -2.5094 0.5040 8 7 2.0680 -2.6657 2.4166 9 6 1.6739 -4.0669 2.5831 10 1 0.6133 -4.2335 2.3950 11 6 2.5929 -5.0567 1.8480 12 6 3.4481 -5.0900 3.1257 13 1 3.8210 -6.0832 3.3758 14 7 4.4941 -4.0648 3.1585 15 6 5.5705 -4.2255 3.9535 16 8 5.6736 -5.2216 4.6431 17 6 6.6244 -3.1930 3.9862 18 6 7.7149 -3.3558 4.7909 19 7 8.6914 -2.4109 4.8292 20 6 9.8653 -2.3231 5.5303 21 6 10.4015 -3.3367 6.5081 22 8 9.3121 -4.0116 7.1402 23 14 11.4289 -2.4711 7.7989 24 6 10.4542 -1.1609 5.1764 25 7 9.6737 -0.5396 4.2880 26 6 8.5965 -1.2762 4.0636 27 6 7.4749 -1.0841 3.2267 28 35 7.3369 0.4718 2.1608 29 6 6.5033 -2.0305 3.1840 30 6 2.1753 -4.6963 3.8937 31 1 -0.3634 0.5139 0.8900 32 1 -0.3634 0.5139 -0.8900 33 1 -0.3633 -1.0276 -0.0005 34 1 3.1300 1.4424 0.0005 35 1 1.6767 1.9563 -0.8900 36 1 1.6767 1.9563 0.8900 37 1 1.6767 -1.7489 -1.2492 38 1 1.6766 -0.2075 -2.1392 39 1 3.1300 -0.7216 -1.2490 40 1 2.6275 -2.2368 3.0829 41 1 3.1060 -4.6218 0.9903 42 1 2.1155 -6.0091 1.6174 43 1 4.4119 -3.2702 2.6083 44 1 7.8027 -4.2423 5.4016 45 1 11.0194 -4.0614 5.9779 46 1 8.7192 -3.4267 7.6318 47 1 10.6063 -1.4579 8.5073 48 1 11.9641 -3.4599 8.7690 49 1 11.3988 -0.7942 5.5499 50 1 5.6419 -1.8973 2.5462 51 1 1.5824 -5.5496 4.2229 52 1 2.3512 -3.9702 4.6874 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_13941094_12335884.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 19:54:57 Heat of formation + Delta-G solvation = -9.181320 kcal Electronic energy + Delta-G solvation = -39807.737423 eV Core-core repulsion = 34630.395462 eV Total energy + Delta-G solvation = -5177.341961 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 467.093 amu Computer time = 1.74 seconds Orbital eigenvalues (eV) -44.29187 -42.17612 -41.41775 -40.03958 -38.53851 -38.12218 -37.82933 -35.55314 -35.35790 -34.75674 -33.68293 -32.42149 -31.78374 -30.29793 -28.36027 -28.29897 -26.99450 -26.88964 -26.60279 -25.19479 -24.11970 -23.44628 -22.58118 -21.98345 -21.17488 -20.74621 -19.66167 -19.21785 -18.68972 -18.30842 -17.82407 -17.64201 -17.54394 -17.33325 -17.04628 -16.49282 -16.42234 -16.18638 -16.06811 -15.91599 -15.75197 -15.56844 -15.41051 -15.26075 -14.89584 -14.71304 -14.45453 -14.11374 -13.73018 -13.60006 -13.47824 -13.39046 -13.34762 -13.12762 -13.04801 -13.00569 -12.90136 -12.86104 -12.78342 -12.56698 -12.30713 -12.15838 -12.09349 -11.60288 -11.50244 -11.40985 -11.40770 -11.37984 -11.29017 -11.11614 -11.07866 -10.43973 -10.20019 -10.04210 -9.11725 -4.93907 -0.95079 -0.43454 0.15910 0.93937 1.05309 1.11312 1.37720 1.66867 1.71134 1.77891 1.85058 1.99107 2.16444 2.77370 2.96895 3.04002 3.11888 3.28734 3.29884 3.39474 3.44379 3.50417 3.72397 3.74494 3.80201 3.82819 3.94713 4.04952 4.10668 4.25776 4.34754 4.41052 4.44279 4.49209 4.57080 4.61877 4.66202 4.72853 4.74570 4.77530 4.81406 4.87600 4.88343 4.91830 4.94077 4.95413 5.07967 5.19055 5.27809 5.30617 5.32583 5.46800 5.53374 5.58001 6.16334 6.18214 6.30936 6.47529 6.85338 7.29906 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.181 4.181 2 C 0.131 3.869 3 C -0.140 4.140 4 C -0.180 4.180 5 O -0.366 6.366 6 C 0.646 3.354 7 O -0.584 6.584 8 N -0.690 5.690 9 C 0.133 3.867 10 H 0.097 0.903 11 C -0.147 4.147 12 C 0.114 3.886 13 H 0.104 0.896 14 N -0.695 5.695 15 C 0.583 3.417 16 O -0.556 6.556 17 C -0.171 4.171 18 C 0.161 3.839 19 N -0.358 5.358 20 C -0.087 4.087 21 C -0.053 4.053 22 O -0.547 6.547 23 Si 0.816 3.184 24 C 0.046 3.954 25 N -0.490 5.490 26 C 0.223 3.777 27 C -0.075 4.075 28 Br 0.008 6.992 29 C -0.030 4.030 30 C -0.139 4.139 31 H 0.060 0.940 32 H 0.084 0.916 33 H 0.065 0.935 34 H 0.071 0.929 35 H 0.096 0.904 36 H 0.068 0.932 37 H 0.066 0.934 38 H 0.083 0.917 39 H 0.064 0.936 40 H 0.412 0.588 41 H 0.070 0.930 42 H 0.126 0.874 43 H 0.407 0.593 44 H 0.193 0.807 45 H 0.139 0.861 46 H 0.387 0.613 47 H -0.289 1.289 48 H -0.290 1.290 49 H 0.229 0.771 50 H 0.174 0.826 51 H 0.131 0.869 52 H 0.083 0.917 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.607 1.298 0.493 1.515 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.238 4.238 2 C 0.095 3.905 3 C -0.197 4.197 4 C -0.238 4.238 5 O -0.281 6.281 6 C 0.400 3.600 7 O -0.474 6.474 8 N -0.351 5.351 9 C 0.029 3.971 10 H 0.115 0.885 11 C -0.186 4.186 12 C 0.009 3.991 13 H 0.122 0.878 14 N -0.347 5.347 15 C 0.370 3.630 16 O -0.435 6.435 17 C -0.179 4.179 18 C 0.035 3.965 19 N -0.032 5.032 20 C -0.198 4.198 21 C -0.161 4.161 22 O -0.354 6.354 23 Si 0.717 3.283 24 C -0.104 4.104 25 N -0.209 5.209 26 C -0.022 4.022 27 C -0.158 4.158 28 Br 0.093 6.907 29 C -0.056 4.056 30 C -0.177 4.177 31 H 0.079 0.921 32 H 0.103 0.897 33 H 0.084 0.916 34 H 0.090 0.910 35 H 0.114 0.886 36 H 0.087 0.913 37 H 0.085 0.915 38 H 0.102 0.898 39 H 0.083 0.917 40 H 0.249 0.751 41 H 0.089 0.911 42 H 0.144 0.856 43 H 0.245 0.755 44 H 0.210 0.790 45 H 0.156 0.844 46 H 0.236 0.764 47 H -0.216 1.216 48 H -0.217 1.217 49 H 0.245 0.755 50 H 0.191 0.809 51 H 0.150 0.850 52 H 0.101 0.899 Dipole moment (debyes) X Y Z Total from point charges 0.886 1.399 0.349 1.693 hybrid contribution -1.264 -0.702 0.662 1.590 sum -0.377 0.698 1.010 1.284 Atomic orbital electron populations 1.22484 0.94210 1.03754 1.03380 1.22298 0.94269 0.92413 0.81526 1.21899 1.02566 0.91093 1.04099 1.22477 1.01804 1.02308 0.97164 1.86315 1.71440 1.23131 1.47205 1.18282 0.78644 0.80716 0.82355 1.90929 1.41582 1.70951 1.43944 1.44545 1.55401 1.11899 1.23272 1.21973 0.99623 0.77805 0.97668 0.88528 1.23783 0.96961 1.01566 0.96324 1.22097 0.86909 0.92441 0.97665 0.87764 1.45562 1.20380 1.24373 1.44361 1.17514 0.81221 0.84714 0.79567 1.90857 1.78652 1.30603 1.43386 1.19218 0.97418 0.97965 1.03278 1.22209 0.85506 0.92664 0.96150 1.42750 1.15833 1.15431 1.29176 1.22439 0.89076 1.03078 1.05213 1.25207 0.93981 0.98202 0.98668 1.86594 1.40379 1.38428 1.69995 0.93439 0.82339 0.76792 0.75722 1.23050 1.01169 0.90533 0.95614 1.70845 1.02360 1.29197 1.18525 1.20683 0.97500 0.86134 0.97840 1.20562 0.95380 0.98231 1.01583 1.96846 1.97723 1.31514 1.64611 1.21233 0.98053 0.89885 0.96436 1.23766 0.96123 1.02326 0.95517 0.92074 0.89712 0.91582 0.91032 0.88579 0.91298 0.91503 0.89814 0.91663 0.75128 0.91126 0.85628 0.75514 0.79039 0.84364 0.76404 1.21552 1.21669 0.75465 0.80884 0.85049 0.89873 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.27 8.37 71.98 0.60 0.33 16 2 C 0.13 0.07 1.13 -10.79 -0.01 0.06 16 3 C -0.14 0.48 8.85 71.98 0.64 1.12 16 4 C -0.18 -0.14 8.37 71.98 0.60 0.46 16 5 O -0.37 -0.65 9.94 -55.43 -0.55 -1.20 16 6 C 0.65 1.63 8.06 129.79 1.05 2.67 16 7 O -0.58 -4.65 11.82 19.83 0.23 -4.42 16 8 N -0.69 2.52 4.34 -567.60 -2.46 0.06 16 9 C 0.13 -0.67 4.00 45.52 0.18 -0.48 16 10 H 0.10 -0.29 8.05 -2.39 -0.02 -0.31 16 11 C -0.15 0.82 7.61 31.12 0.24 1.05 16 12 C 0.11 -0.56 4.28 45.52 0.19 -0.37 16 13 H 0.10 -0.25 7.54 -2.39 -0.02 -0.27 16 14 N -0.69 3.04 4.91 -443.15 -2.18 0.86 16 15 C 0.58 0.41 7.76 86.71 0.67 1.08 16 16 O -0.56 -4.16 15.91 -4.03 -0.06 -4.23 16 17 C -0.17 0.04 5.84 -20.35 -0.12 -0.08 16 18 C 0.16 0.24 9.91 83.65 0.83 1.07 16 19 N -0.36 -0.99 2.93 -337.71 -0.99 -1.98 16 20 C -0.09 0.02 6.24 41.01 0.26 0.27 16 21 C -0.05 0.20 3.06 71.24 0.22 0.42 16 22 O -0.55 0.50 10.92 -148.98 -1.63 -1.13 16 23 Si 0.82 -4.91 31.18 68.60 2.14 -2.77 16 24 C 0.05 0.00 10.44 83.68 0.87 0.87 16 25 N -0.49 -3.17 11.30 -194.11 -2.19 -5.37 16 26 C 0.22 1.22 7.59 134.19 1.02 2.23 16 27 C -0.08 -0.19 6.24 22.42 0.14 -0.05 16 28 Br 0.01 0.02 33.72 -20.37 -0.69 -0.67 16 29 C -0.03 0.06 9.26 22.55 0.21 0.27 16 30 C -0.14 1.04 7.57 31.12 0.24 1.28 16 31 H 0.06 0.07 8.14 -2.38 -0.02 0.05 16 32 H 0.08 -0.11 8.14 -2.39 -0.02 -0.13 16 33 H 0.07 0.42 5.88 -2.39 -0.01 0.41 16 34 H 0.07 -0.27 8.14 -2.39 -0.02 -0.29 16 35 H 0.10 -0.59 8.14 -2.39 -0.02 -0.61 16 36 H 0.07 -0.23 8.14 -2.39 -0.02 -0.25 16 37 H 0.07 0.37 5.88 -2.39 -0.01 0.36 16 38 H 0.08 -0.15 8.14 -2.39 -0.02 -0.17 16 39 H 0.06 -0.02 8.14 -2.39 -0.02 -0.04 16 40 H 0.41 -2.92 7.94 -92.71 -0.74 -3.66 16 41 H 0.07 -0.20 8.14 -2.39 -0.02 -0.22 16 42 H 0.13 -0.99 8.14 -2.39 -0.02 -1.01 16 43 H 0.41 -2.94 5.22 -92.71 -0.48 -3.42 16 44 H 0.19 0.32 6.20 -2.91 -0.02 0.30 16 45 H 0.14 -0.83 7.96 -2.39 -0.02 -0.85 16 46 H 0.39 -2.02 8.70 -74.05 -0.64 -2.66 16 47 H -0.29 0.05 7.11 99.48 0.71 0.76 16 48 H -0.29 -0.28 7.11 99.48 0.71 0.43 16 49 H 0.23 -1.97 6.90 -2.91 -0.02 -1.99 16 50 H 0.17 -1.30 6.44 -2.91 -0.02 -1.32 16 51 H 0.13 -1.34 8.14 -2.39 -0.02 -1.36 16 52 H 0.08 -0.59 8.13 -2.39 -0.02 -0.61 16 Total: 0.00 -24.12 442.05 -1.36 -25.48 By element: Atomic # 1 Polarization: -16.06 SS G_CDS: -0.81 Total: -16.86 kcal Atomic # 6 Polarization: 4.40 SS G_CDS: 7.82 Total: 12.22 kcal Atomic # 7 Polarization: 1.39 SS G_CDS: -7.82 Total: -6.43 kcal Atomic # 8 Polarization: -8.96 SS G_CDS: -2.01 Total: -10.97 kcal Atomic # 14 Polarization: -4.91 SS G_CDS: 2.14 Total: -2.77 kcal Atomic # 35 Polarization: 0.02 SS G_CDS: -0.69 Total: -0.67 kcal Total: -24.12 -1.36 -25.48 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_13941094_12335884.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 16.298 kcal (2) G-P(sol) polarization free energy of solvation -24.118 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -7.820 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.362 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.479 kcal (6) G-S(sol) free energy of system = (1) + (5) -9.181 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.74 seconds