Wall clock time and date at job start Thu Mar 4 2021 19:55:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46503 * 1 3 3 N 1.28474 * 124.87631 * 2 1 4 4 C 1.31811 * 110.06764 * 180.13268 * 3 2 1 5 5 C 1.47712 * 126.51792 * 179.86005 * 4 3 2 6 6 O 1.21566 * 120.00085 * 179.68904 * 5 4 3 7 7 N 1.34769 * 120.00009 * 359.68825 * 5 4 3 8 8 C 1.46497 * 120.00274 * 180.02562 * 7 5 4 9 9 H 1.09002 * 112.90477 * 336.24972 * 8 7 5 10 10 C 1.53779 * 113.61581 * 107.50145 * 8 7 5 11 11 C 1.53779 * 87.08402 * 139.98450 * 10 8 7 12 12 H 1.08998 * 113.69354 * 89.12517 * 11 10 8 13 13 N 1.46501 * 113.61719 * 220.02087 * 11 10 8 14 14 C 1.34772 * 120.00042 * 252.49461 * 13 11 10 15 15 O 1.21511 * 120.00175 * 0.02562 * 14 13 11 16 16 O 1.34640 * 119.99847 * 179.97438 * 14 13 11 17 17 C 1.45204 * 116.99801 * 180.02562 * 16 14 13 18 18 C 1.53003 * 109.47147 * 60.00163 * 17 16 14 19 19 C 1.52996 * 109.47300 * 180.02562 * 17 16 14 20 20 C 1.53006 * 109.47071 * 300.00400 * 17 16 14 21 21 C 1.53784 * 113.61569 * 204.99925 * 8 7 5 22 22 C 1.41501 * 106.96525 * 359.59733 * 4 3 2 23 23 C 1.35028 * 124.88719 * 179.67935 * 2 1 3 24 24 C 1.50700 * 126.38648 * 0.04794 * 23 2 1 25 25 O 1.42904 * 109.46917 * 30.00695 * 24 23 2 26 26 Si 1.86303 * 109.47036 * 150.00252 * 24 23 2 27 27 H 1.09003 * 109.47091 * 270.31841 * 1 2 3 28 28 H 1.08993 * 109.47540 * 30.32686 * 1 2 3 29 29 H 1.09004 * 109.46808 * 150.32815 * 1 2 3 30 30 H 0.97009 * 120.00192 * 0.02562 * 7 5 4 31 31 H 1.09006 * 113.61307 * 25.43652 * 10 8 7 32 32 H 1.09007 * 113.61642 * 254.53409 * 10 8 7 33 33 H 0.97005 * 120.00129 * 72.49260 * 13 11 10 34 34 H 1.08995 * 109.46763 * 60.00304 * 18 17 16 35 35 H 1.09000 * 109.46816 * 180.02562 * 18 17 16 36 36 H 1.08998 * 109.47153 * 299.99796 * 18 17 16 37 37 H 1.09002 * 109.47594 * 59.99557 * 19 17 16 38 38 H 1.08995 * 109.47464 * 180.02562 * 19 17 16 39 39 H 1.09008 * 109.46836 * 299.99899 * 19 17 16 40 40 H 1.09005 * 109.47142 * 60.00207 * 20 17 16 41 41 H 1.09000 * 109.47324 * 180.02562 * 20 17 16 42 42 H 1.09002 * 109.47230 * 299.99917 * 20 17 16 43 43 H 1.09004 * 113.61451 * 105.47149 * 21 8 7 44 44 H 1.08994 * 113.61477 * 334.56451 * 21 8 7 45 45 H 1.08004 * 127.25166 * 180.22161 * 22 4 3 46 46 H 1.08993 * 109.47223 * 270.00374 * 24 23 2 47 47 H 0.96696 * 113.99645 * 59.99739 * 25 24 23 48 48 H 1.48490 * 110.00100 * 180.02562 * 26 24 23 49 49 H 1.48501 * 110.00236 * 301.32514 * 26 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 7 2.1996 1.0540 0.0000 4 6 3.4740 0.7171 -0.0029 5 6 4.6272 1.6401 -0.0067 6 8 5.7596 1.1980 -0.0034 7 7 4.4239 2.9724 -0.0140 8 6 5.5676 3.8879 -0.0184 9 1 6.4730 3.4377 0.3888 10 6 5.7843 4.5964 -1.3659 11 6 6.1144 5.8625 -0.5578 12 1 7.1689 5.9535 -0.2975 13 7 5.5638 7.0896 -1.1386 14 6 6.3817 7.9775 -1.7377 15 8 7.5758 7.7600 -1.7967 16 8 5.8756 9.1050 -2.2720 17 6 6.8152 10.0154 -2.9018 18 6 7.5267 9.2992 -4.0515 19 6 6.0613 11.2304 -3.4460 20 6 7.8478 10.4762 -1.8711 21 6 5.2503 5.2730 0.5696 22 6 3.5272 -0.6969 0.0047 23 6 2.2373 -1.1076 0.0062 24 6 1.7535 -2.5348 0.0132 25 8 0.4961 -2.6148 -0.6611 26 14 2.9954 -3.6158 -0.8586 27 1 -0.3633 0.0057 1.0277 28 1 -0.3634 0.8870 -0.5189 29 1 -0.3633 -0.8930 -0.5088 30 1 3.5203 3.3252 -0.0162 31 1 4.8772 4.6842 -1.9639 32 1 6.6302 4.2074 -1.9327 33 1 4.6105 7.2631 -1.0919 34 1 6.7911 8.9709 -4.7857 35 1 8.2323 9.9825 -4.5240 36 1 8.0639 8.4338 -3.6634 37 1 5.5546 11.7406 -2.6268 38 1 6.7665 11.9136 -3.9193 39 1 5.3254 10.9024 -4.1803 40 1 8.3851 9.6108 -1.4831 41 1 8.5529 11.1600 -2.3438 42 1 7.3410 10.9865 -1.0520 43 1 5.6650 5.4302 1.5653 44 1 4.1972 5.5457 0.5007 45 1 4.4109 -1.3178 0.0081 46 1 1.6361 -2.8736 1.0424 47 1 0.5259 -2.3280 -1.5841 48 1 2.5297 -5.0257 -0.8592 49 1 3.1884 -3.1445 -2.2536 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_13941094_13259642.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 19:55:03 Heat of formation + Delta-G solvation = -37.643934 kcal Electronic energy + Delta-G solvation = -31076.379526 eV Core-core repulsion = 26622.299758 eV Total energy + Delta-G solvation = -4454.079768 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 353.183 amu Computer time = 1.40 seconds Orbital eigenvalues (eV) -43.84293 -41.94448 -41.03745 -39.58920 -38.25295 -37.92292 -35.60360 -34.93971 -34.39632 -33.41743 -32.49650 -28.69749 -28.38126 -28.31357 -26.95229 -26.80933 -25.97498 -24.25253 -22.81730 -22.19635 -21.57344 -21.07623 -20.67481 -19.30644 -19.00279 -18.11325 -17.60203 -17.53936 -17.23733 -17.19754 -17.09809 -16.29322 -16.08582 -15.96067 -15.74136 -15.70623 -15.47415 -15.33561 -14.92143 -14.71281 -14.39001 -14.12450 -13.98479 -13.61373 -13.53218 -13.40735 -13.37749 -13.15312 -12.93812 -12.87959 -12.64282 -12.60977 -12.49260 -12.42670 -12.25099 -12.18474 -12.00572 -11.99218 -11.40930 -11.29006 -11.12488 -11.01713 -10.33802 -10.20977 -9.98005 -9.95922 -4.88918 0.43277 0.81677 1.12222 1.21908 1.55551 1.67779 1.71637 1.94314 2.13177 2.28711 3.02895 3.13895 3.29436 3.34266 3.39127 3.47663 3.73046 3.77325 3.80444 3.86332 3.93188 4.02501 4.31915 4.34660 4.41540 4.44587 4.50179 4.57164 4.59666 4.59985 4.64081 4.66011 4.72856 4.74703 4.75160 4.83226 4.84960 4.86463 4.94903 4.99101 5.11875 5.24862 5.25898 5.26931 5.35527 5.50068 5.57663 5.67351 6.24074 6.35781 6.40358 6.81601 7.11197 7.32525 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.064 3.936 2 N -0.264 5.264 3 N -0.264 5.264 4 C -0.041 4.041 5 C 0.605 3.395 6 O -0.564 6.564 7 N -0.694 5.694 8 C 0.124 3.876 9 H 0.111 0.889 10 C -0.162 4.162 11 C 0.143 3.857 12 H 0.111 0.889 13 N -0.686 5.686 14 C 0.643 3.357 15 O -0.594 6.594 16 O -0.369 6.369 17 C 0.127 3.873 18 C -0.180 4.180 19 C -0.137 4.137 20 C -0.180 4.180 21 C -0.131 4.131 22 C -0.187 4.187 23 C -0.014 4.014 24 C -0.043 4.043 25 O -0.536 6.536 26 Si 0.783 3.217 27 H 0.093 0.907 28 H 0.103 0.897 29 H 0.130 0.870 30 H 0.417 0.583 31 H 0.098 0.902 32 H 0.065 0.935 33 H 0.419 0.581 34 H 0.061 0.939 35 H 0.086 0.914 36 H 0.063 0.937 37 H 0.070 0.930 38 H 0.098 0.902 39 H 0.069 0.931 40 H 0.063 0.937 41 H 0.086 0.914 42 H 0.063 0.937 43 H 0.098 0.902 44 H 0.117 0.883 45 H 0.181 0.819 46 H 0.146 0.854 47 H 0.390 0.610 48 H -0.283 1.283 49 H -0.294 1.294 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.682 0.914 1.092 6.832 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.075 4.075 2 N -0.053 5.053 3 N -0.102 5.102 4 C -0.199 4.199 5 C 0.390 3.610 6 O -0.441 6.441 7 N -0.345 5.345 8 C 0.018 3.982 9 H 0.129 0.871 10 C -0.202 4.202 11 C 0.038 3.962 12 H 0.128 0.872 13 N -0.346 5.346 14 C 0.397 3.603 15 O -0.485 6.485 16 O -0.283 6.283 17 C 0.091 3.909 18 C -0.238 4.238 19 C -0.194 4.194 20 C -0.237 4.237 21 C -0.169 4.169 22 C -0.214 4.214 23 C -0.140 4.140 24 C -0.154 4.154 25 O -0.344 6.344 26 Si 0.686 3.314 27 H 0.112 0.888 28 H 0.122 0.878 29 H 0.147 0.853 30 H 0.254 0.746 31 H 0.117 0.883 32 H 0.084 0.916 33 H 0.256 0.744 34 H 0.080 0.920 35 H 0.105 0.895 36 H 0.082 0.918 37 H 0.089 0.911 38 H 0.116 0.884 39 H 0.088 0.912 40 H 0.082 0.918 41 H 0.105 0.895 42 H 0.082 0.918 43 H 0.117 0.883 44 H 0.135 0.865 45 H 0.199 0.801 46 H 0.163 0.837 47 H 0.240 0.760 48 H -0.210 1.210 49 H -0.221 1.221 Dipole moment (debyes) X Y Z Total from point charges -6.185 0.773 0.938 6.303 hybrid contribution -0.916 0.029 -0.790 1.210 sum -7.101 0.803 0.149 7.148 Atomic orbital electron populations 1.22887 0.70825 1.07643 1.06117 1.45701 1.08955 1.01887 1.48768 1.73451 1.02672 1.14790 1.19270 1.21816 0.90903 0.94499 1.12683 1.17068 0.86333 0.82255 0.75298 1.90795 1.23838 1.77763 1.51733 1.45659 1.10704 1.04505 1.73589 1.22264 0.90446 0.88430 0.97034 0.87119 1.24015 1.03016 0.95453 0.97748 1.22256 0.99505 0.80272 0.94162 0.87152 1.44645 1.11071 1.19731 1.59106 1.18423 0.84398 0.80133 0.77383 1.90912 1.15484 1.78548 1.63527 1.86311 1.42499 1.30150 1.69386 1.22351 0.88384 0.88017 0.92162 1.22474 1.01418 1.02303 0.97564 1.21889 1.01297 0.94434 1.01825 1.22476 0.99354 1.02657 0.99239 1.23713 1.02247 0.91948 0.99037 1.21728 0.97426 0.93586 1.08706 1.22129 0.90992 0.92100 1.08731 1.24848 0.93226 0.92140 1.05144 1.86557 1.29557 1.88357 1.29925 0.93177 0.83925 0.74774 0.79541 0.88829 0.87843 0.85260 0.74603 0.88344 0.91593 0.74379 0.92021 0.89491 0.91843 0.91076 0.88357 0.91224 0.91778 0.89518 0.91826 0.88299 0.86490 0.80139 0.83680 0.75967 1.21003 1.22091 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.45 11.00 127.77 1.41 0.95 16 2 N -0.26 0.08 3.70 -355.92 -1.32 -1.24 16 3 N -0.26 -0.87 11.67 -48.17 -0.56 -1.43 16 4 C -0.04 -0.23 7.13 42.46 0.30 0.07 16 5 C 0.60 4.46 7.82 86.75 0.68 5.14 16 6 O -0.56 -7.87 16.53 -3.92 -0.06 -7.93 16 7 N -0.69 -0.53 5.35 -443.05 -2.37 -2.90 16 8 C 0.12 -0.08 4.24 45.52 0.19 0.11 16 9 H 0.11 0.30 7.47 -2.39 -0.02 0.29 16 10 C -0.16 0.04 7.68 31.12 0.24 0.27 16 11 C 0.14 -0.16 4.24 45.52 0.19 0.03 16 12 H 0.11 0.27 7.46 -2.39 -0.02 0.25 16 13 N -0.69 0.19 5.36 -567.60 -3.04 -2.85 16 14 C 0.64 4.29 8.06 129.79 1.05 5.34 16 15 O -0.59 -7.38 11.48 19.81 0.23 -7.15 16 16 O -0.37 -2.00 9.94 -55.50 -0.55 -2.55 16 17 C 0.13 0.41 1.13 -10.79 -0.01 0.39 16 18 C -0.18 -0.70 8.37 71.98 0.60 -0.10 16 19 C -0.14 0.27 8.85 71.98 0.64 0.91 16 20 C -0.18 -0.62 8.37 71.98 0.60 -0.02 16 21 C -0.13 0.78 7.58 31.12 0.24 1.02 16 22 C -0.19 -0.51 9.35 22.41 0.21 -0.30 16 23 C -0.01 0.01 6.18 41.40 0.26 0.27 16 24 C -0.04 0.22 2.99 71.24 0.21 0.43 16 25 O -0.54 2.92 10.02 -148.98 -1.49 1.42 16 26 Si 0.78 -3.14 31.23 68.60 2.14 -1.00 16 27 H 0.09 -0.78 8.14 -2.39 -0.02 -0.80 16 28 H 0.10 -0.93 8.14 -2.39 -0.02 -0.95 16 29 H 0.13 -1.25 5.01 -2.39 -0.01 -1.26 16 30 H 0.42 -1.29 8.45 -92.70 -0.78 -2.07 16 31 H 0.10 -0.16 8.14 -2.38 -0.02 -0.18 16 32 H 0.07 0.24 8.14 -2.38 -0.02 0.22 16 33 H 0.42 -2.28 8.84 -92.70 -0.82 -3.10 16 34 H 0.06 0.20 8.14 -2.39 -0.02 0.18 16 35 H 0.09 0.04 8.14 -2.39 -0.02 0.02 16 36 H 0.06 0.60 5.88 -2.39 -0.01 0.58 16 37 H 0.07 -0.17 8.14 -2.39 -0.02 -0.19 16 38 H 0.10 -0.50 8.14 -2.39 -0.02 -0.52 16 39 H 0.07 -0.15 8.14 -2.38 -0.02 -0.17 16 40 H 0.06 0.57 5.88 -2.38 -0.01 0.55 16 41 H 0.09 0.01 8.14 -2.39 -0.02 -0.01 16 42 H 0.06 0.16 8.14 -2.39 -0.02 0.14 16 43 H 0.10 -0.67 8.14 -2.39 -0.02 -0.69 16 44 H 0.12 -1.17 8.09 -2.39 -0.02 -1.19 16 45 H 0.18 -0.07 7.02 -2.91 -0.02 -0.09 16 46 H 0.15 -1.13 7.96 -2.39 -0.02 -1.15 16 47 H 0.39 -3.95 8.39 -74.06 -0.62 -4.57 16 48 H -0.28 -0.51 7.11 99.48 0.71 0.20 16 49 H -0.29 -0.74 7.11 99.48 0.71 -0.04 16 Total: 0.00 -24.27 400.65 -1.41 -25.67 By element: Atomic # 1 Polarization: -13.38 SS G_CDS: -1.18 Total: -14.56 kcal Atomic # 6 Polarization: 7.72 SS G_CDS: 6.80 Total: 14.52 kcal Atomic # 7 Polarization: -1.13 SS G_CDS: -7.29 Total: -8.42 kcal Atomic # 8 Polarization: -14.33 SS G_CDS: -1.88 Total: -16.21 kcal Atomic # 14 Polarization: -3.14 SS G_CDS: 2.14 Total: -1.00 kcal Total: -24.27 -1.41 -25.67 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_13941094_13259642.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -11.971 kcal (2) G-P(sol) polarization free energy of solvation -24.267 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -36.238 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.406 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.673 kcal (6) G-S(sol) free energy of system = (1) + (5) -37.644 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.41 seconds